| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 459,278 | Δ69 bp | coding (391‑459/2355 nt) | lon → | Lon protease |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 459278 | 459346 | 69 | 52 [1] | [0] 49 | lon | Lon protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 459277 | 1 (0.020) | 41 (0.820) | 25/110 | 0.2 | 99.0% | coding (390/2355 nt) | lon | Lon protease |
| ? | NC_000913 | 459347 = | 0 (0.000) | coding (460/2355 nt) | lon | Lon protease | |||||
TGGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/459205‑459277‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgctgACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCC > NC_000913/459347‑459408 TGGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGG > 1:2296804/1‑65 GGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGGCCATTGATGAGCGGGAACAGGA < 1:2924125/65‑1 GGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGA > 1:2159849/1‑65 CGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAG < 1:1705325/65‑1 GAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGT < 1:3584661/65‑1 GAACACTGTTCTACGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGT < 1:4386745/65‑1 ACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTG > 1:3857055/1‑65 ACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTG > 1:2622498/1‑65 TCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTC > 1:638535/1‑65 CGGATTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGC < 1:2035454/65‑1 CGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGC < 1:3631629/65‑1 AGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATC > 1:499844/1‑65 AGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATC < 1:3392343/65‑1 ggATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCG < 1:1244098/63‑1 TATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGA > 1:2422312/1‑65 TATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGA > 1:152000/1‑65 TATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGA > 1:695591/1‑65 CTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGA > 1:4062261/1‑65 TGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGAT > 1:3358409/1‑65 TGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGAT > 1:3118209/1‑65 GAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCC > 1:2419179/1‑65 AGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCG > 1:2487223/1‑65 AGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCG > 1:2665646/1‑65 CCGACCATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCG < 1:2596035/65‑1 CATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGG > 1:3647294/1‑65 CATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGG < 1:2449576/65‑1 ATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGC < 1:3057613/65‑1 ATTGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGC > 1:3924347/1‑65 gGATGAGCGAGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGG < 1:2423222/64‑1 TGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGG < 1:1947633/65‑1 TGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGG < 1:2819017/65‑1 TGATGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGG < 1:258068/65‑1 TGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATA < 1:3428354/65‑1 TGAGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATA < 1:1160044/65‑1 AGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACt > 1:4100706/1‑64 AGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACC < 1:1651881/65‑1 AGCGGGAACAGGAAGTGCTGACGTCGCTGAATAGCACCGACGATCCGGCGCGTCTGGCGGATACC > 1:1245175/1‑65 AGCGGGAACAGAAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACC < 1:3451249/65‑1 GGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATT > 1:776173/1‑65 GGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATT < 1:1587582/65‑1 GGGAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATT > 1:2281865/1‑65 GAACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGC < 1:1337288/65‑1 AACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCT < 1:201840/65‑1 ACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCCTTGCTG > 1:1312962/1‑65 ACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTG > 1:1295960/1‑65 ACAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTG > 1:2516001/1‑65 CAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGC < 1:2631639/65‑1 CAGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGC < 1:1331202/65‑1 AGGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCA < 1:3762976/65‑1 GAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACA > 1:3885750/1‑65 GAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACA > 1:345252/1‑65 AAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACGATTGCTGCACAT > 1:1422123/1‑65 AGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGGACCTA > 1:1484063/1‑65 AGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATA > 1:599011/1‑65 AGTGCTGACGTCGCTGAATACCATCGACGATCCGGCGCGTCTGGCGGATCCCATTGCTGCACATA > 1:564279/1‑65 TGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGAAACCTTTTCTGCACATAag > 1:840986/1‑63 CTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCC < 1:3974755/65‑1 TGGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/459205‑459277‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgctgACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCC > NC_000913/459347‑459408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |