| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 516635 = | 64 (1.100) | 3 (0.060) | 3/110 | 2.8 | 4.8% | coding (53/780 nt) | fetB | putative iron ABC exporter membrane subunit FetB |
| ? | NC_000913 | = 516631 | 63 (1.260) | coding (49/780 nt) | fetB | putative iron ABC exporter membrane subunit FetB | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCCCGACGCTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCACCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/516707‑516635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccaccaGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTTCCTG < NC_000913/516631‑516570 CGCCCGACGCTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGC < 1:3230297/65‑1 CCGACGCTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCAC < 1:2081056/65‑1 CGACGCTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCACC < 1:171865/65‑1 CTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCACCACCAG > 1:985263/1‑65 TCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCACCACCAGCATTAATGCCAGTGCT < 1:4269626/65‑1 TAATTAAGATTGCCACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAG < 1:1766342/65‑1 CCACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGC < 1:4319628/65‑1 CACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCT < 1:4066470/65‑1 ACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTT < 1:2245544/65‑1 ACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTT < 1:2583882/65‑1 ACCACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTT > 1:70841/1‑65 ACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTTCCT < 1:1307335/65‑1 ACCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTTCCT < 1:226457/65‑1 CCAGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTTCCTG > 1:3963705/1‑65 CGCCCGACGCTCCAGAGAATATCTTTCTCCAGCGCCAGTTTTTCTTTATGGCTAATTAAGATTGCCACCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/516707‑516635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccaccaGCATTAATGCCAGTGCTAATGATTCGTTAGTAATATTATGCGAGTTCATAGCGTGCTTCCTG < NC_000913/516631‑516570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |