| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908–258674 | 258683 | 10–776 | 82 [0] | [0] 83 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 78 (1.530) | 26/112 | 0.2 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCG > NC_000913/258620‑258748 | ggacacccgaagagcagatttatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa > 1:1100537‑M2/65‑65 (MQ=255)ggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa > 1:3096925‑M2/65‑65 (MQ=255)ggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa > 1:3740433‑M2/65‑65 (MQ=255)ggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa > 1:3953158‑M2/65‑65 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:2657718‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:3089423‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:3357601‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:3497004‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:2047114‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:3929510‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:1679821‑M2/3‑1 (MQ=255) acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:1172185‑M2/3‑1 (MQ=255) cccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAgtgac > 1:2769588‑M2/60‑63 (MQ=255) cccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa > 1:759847‑M2/60‑65 (MQ=255) cccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa > 1:469627‑M2/60‑65 (MQ=255) gaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg > 1:3999295‑M2/57‑65 (MQ=255) aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa < 1:426919‑M2/10‑1 (MQ=255) aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa < 1:1771112‑M2/10‑1 (MQ=255) aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa < 1:1833314‑M2/10‑1 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAgac > 1:4179948‑M2/55‑64 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt < 1:4423309‑M2/11‑1 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt < 1:971011‑M2/11‑1 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt > 1:2479213‑M2/55‑65 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt > 1:1823591‑M2/55‑65 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt < 1:3882148‑M2/11‑1 (MQ=255) agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt > 1:144285‑M2/55‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAaagactg > 1:2208243‑M2/53‑62 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCATAGATaa > 1:2897277‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:443221‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:406617‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:3762619‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:3832422‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:2770973‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:984843‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:2556747‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:130590‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:2494592‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:1405315‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa > 1:1540553‑M2/53‑65 (MQ=255) agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGCGCAAAGATaa > 1:4310988‑M2/53‑65 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt < 1:1989248‑M2/18‑1 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt < 1:2344491‑M2/18‑1 (MQ=255) ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt > 1:3237482‑M2/47‑65 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtt < 1:1130248‑M2/22‑1 (MQ=255) tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttt > 1:385401‑M2/43‑65 (MQ=255) atttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt < 1:1555405‑M2/30‑1 (MQ=255) ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 1:1124842‑M2/32‑1 (MQ=255) ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 1:4246936‑M2/32‑1 (MQ=255) ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 1:757281‑M2/32‑1 (MQ=255) ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 1:1283203‑M2/32‑1 (MQ=255) ttaccgcactaagcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 1:3470046‑M2/32‑1 (MQ=255) ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg > 1:3805227‑M2/31‑65 (MQ=255) gcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGc < 1:2583738‑M2/37‑1 (MQ=255) cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt < 1:2816857‑M2/38‑1 (MQ=255) actaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTg < 1:1333151‑M2/39‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGt < 1:3507612‑M2/40‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGt < 1:1775872‑M2/40‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGt < 1:2448489‑M2/40‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGt < 1:148116‑M2/40‑1 (MQ=255) aggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt < 1:3577269‑M2/42‑1 (MQ=255) aggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt < 1:3463910‑M2/42‑1 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:1989302‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:303133‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:3045396‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:248587‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:4390675‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:3234122‑M2/21‑65 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:1748107‑M2/21‑65 (MQ=255) cccgtatattagtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg > 1:4297868‑M2/21‑65 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCaa > 1:4343633‑M2/17‑65 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc > 1:4314017‑M2/16‑65 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc < 1:1465611‑M2/50‑1 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc > 1:2503732‑M2/16‑65 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc > 1:947617‑M2/16‑65 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc > 1:2751653‑M2/16‑65 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACg < 1:4389136‑M2/51‑1 (MQ=255) cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaa > 1:1429805‑M2/11‑65 (MQ=255) cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaa > 1:3246487‑M2/11‑65 (MQ=255) ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGc > 1:3523134‑M2/5‑65 (MQ=255) gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCa > 1:391339‑M2/4‑65 (MQ=255) gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCa < 1:2037301‑M2/62‑1 (MQ=255) aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAcc < 1:518219‑M2/64‑1 (MQ=255) aGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCg > 1:459619/1‑65 (MQ=255) | CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCG > NC_000913/258620‑258748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |