| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,397,946 | IS5 (+) +4 bp | coding (430‑433/594 nt) | yhdE ← | nucleoside triphosphate pyrophosphatase YhdE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 57 (1.070) | 20/134 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3397946 = | 0 (0.000) | coding (433/594 nt) | yhdE | nucleoside triphosphate pyrophosphatase YhdE | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 73 (1.370) | 21/134 | 0.5 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3397949 | 0 (0.000) | coding (430/594 nt) | yhdE | nucleoside triphosphate pyrophosphatase YhdE | |||||
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2288984‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC > NC_000913/3397946‑3398012 TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:256043/68‑1TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT > 1:789507/1‑68TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT > 1:2217582/1‑68TCAAACATGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:4146947/68‑1 CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA < 1:118695/68‑1 gtACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:1899188/66‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:469291/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:2612235/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:1009159/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:233218/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:3227367/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:3777995/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:501342/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:732146/68‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA < 1:1022704/68‑1 ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACG < 1:1351721/68‑1 ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCGAACG < 1:551854/68‑1 ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGT < 1:1328108/68‑1 AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGC < 1:3484173/68‑1 TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTG < 1:654478/68‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCG > 1:1091425/1‑68 agGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGA < 1:724927/66‑1 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGA < 1:2984054/68‑1 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGA < 1:3228964/68‑1 GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGC < 1:2513098/68‑1 AGTCAGCCGAGAAGTATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCC < 1:2477718/68‑1 AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACGGTTCATCGCTGGCGACATAGCC < 1:2535022/68‑1 AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCC < 1:3529921/68‑1 gcCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCC > 1:3655772/3‑68 CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGC < 1:1327440/68‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGAT < 1:1556139/68‑1 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATG > 1:3661917/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATG > 1:1729893/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATG > 1:1815555/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATG > 1:4126123/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATG > 1:182618/1‑68 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGT < 1:804952/68‑1 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGT < 1:3922426/68‑1 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGT < 1:2043703/68‑1 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGT < 1:142564/68‑1 GAGAAGAATTTCCCCGCTTAGTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGT < 1:177583/68‑1 GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCT < 1:1167282/68‑1 AGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTC > 1:870703/1‑68 AGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTC > 1:2946050/1‑68 AGAATTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACACAGCCC‑CGGCGTCTTCG > 1:884754/1‑68 TTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCT < 1:3370513/68‑1 TTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCT < 1:936948/68‑1 TTTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCT < 1:523006/68‑1 TTCCCCGCTTATTCGCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTG > 1:994066/1‑68 GCACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAA < 1:1744297/68‑1 ACCTTCCCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGT > 1:189513/1‑68 ACCTTCCCTAACGGCTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGT > 1:403508/1‑68 CCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACgaa > 1:3456587/1‑65 CCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC < 1:3760386/68‑1 CCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC > 1:85305/1‑68 CCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC > 1:1920963/1‑68 CCTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC < 1:2960000/68‑1 TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2288984‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGGTTCATCGCTGGCGACATAGCCCGCGATGTCTTCGTCTGTTAACGTTCTGAAAGTCACATC > NC_000913/3397946‑3398012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |