Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 49,884 | C→T | P21L (CCG→CTG) | folA → | dihydrofolate reductase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 49,884 | 0 | C | T | 100.0% | 30.6 / NA | 10 | P21L (CCG→CTG) | folA | dihydrofolate reductase |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/4); total (6/4) |
AATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTG > NC_000913/49822‑49942 | aaTGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCTGt < 1:1343194/65‑1 (MQ=255) gATCAGTCTGTTTGTGTCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCTGTGGa < 1:864286/65‑1 (MQ=255) cAGTCTGATTGCGGCGTTAGCGGTAGTTCGCGTTATCGGCATGGAAAACGCCATGCTGTGGAAcc < 1:2424220/65‑1 (MQ=255) tGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCg > 1:2682818/1‑65 (MQ=255) tttAGCGTTAGACCGCTTTATCGGCTTGAAAAACGCCATGCTGGGGACCCTGCCTGCCGATcgcg < 1:860477/64‑1 (MQ=255) gTAGATCGCGTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGtt > 1:2614479/1‑65 (MQ=255) gTAGATCGCGTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGtt > 1:923060/1‑65 (MQ=255) aTCGCGTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGTTTaaa > 1:3466163/1‑65 (MQ=255) ctcgTTTTCCGCATGAAAACCGCCATCCTGTGGACCCTGCCTGACGATCGCGCCTGGTTTAAACg < 1:973081/63‑1 (MQ=255) gcgTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGGTTAAAcct > 1:2901870/1‑63 (MQ=255) gcgTTATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCCGGTTTAAACGc > 1:2979699/1‑65 (MQ=255) tATCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGTTTAAACGCAaca > 1:3140217/1‑65 (MQ=255) aTCGGCATGGAAAACGCCATGCTGTGGAACCTGCCTGCCGATCGCGCCTGGTTTAAACGCAacac < 1:1173521/65‑1 (MQ=255) ccATGCTGTGGACCCTGCCTGCCGATCGCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTg < 1:3261204/65‑1 (MQ=255) | AATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTG > NC_000913/49822‑49942 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |