| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 1,397,381 | Δ13,756 bp | 100% | [ynaJ]–[ttcA] | 16 genes [ynaJ], uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, zntB, fnrS, ynaL, dbpA, [ttcA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1397381 | 1411136 | 13756 | 107 [0] | [0] 110 | [ynaJ]–[ttcA] | [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397380 | 0 (0.000) | 93 (1.060) | 71/174 | NT | 100% | coding (16/258 nt) | ynaJ | DUF2534 domain‑containing protein YnaJ |
| ? | NC_000913 | 1411137 = | 0 (0.000) | coding (812/936 nt) | ttcA | tRNA cytosine(32) 2‑sulfurtransferase TtcA | |||||
Only 100 of 107 total aligned reads displayed.
GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATA > NC_000913/1397282‑1397478 | ggTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC < 2:1589616‑M1/99‑1 (MQ=255) gTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACa > 2:117883‑M1/1‑98 (MQ=255) gTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACa > 2:570697‑M1/1‑98 (MQ=255) gTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACa > 2:1210687‑M1/1‑98 (MQ=255) tttCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACact < 2:252194‑M1/99‑4 (MQ=255) tCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttc < 2:1842030‑M1/99‑6 (MQ=255) cAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttca < 2:2264253‑M1/99‑7 (MQ=255) agagCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcag < 1:2043809‑M1/99‑8 (MQ=255) gagCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcaga > 2:669662‑M1/1‑91 (MQ=255) aGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccg > 1:1786499‑M1/1‑87 (MQ=255) gACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgt > 1:1275718‑M1/1‑86 (MQ=255) gACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgt > 2:1801991‑M1/1‑86 (MQ=255) gACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgt > 1:110299‑M1/1‑86 (MQ=255) gACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgt > 1:1876865‑M1/1‑86 (MQ=255) aCAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaagcgtg > 2:784457‑M1/1‑85 (MQ=255) cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg > 2:1634506‑M1/1‑84 (MQ=255) cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg > 2:193773‑M1/1‑84 (MQ=255) cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg > 2:2025587‑M1/1‑84 (MQ=255) cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg < 1:829655‑M1/99‑16 (MQ=255) cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg > 1:1910752‑M1/1‑84 (MQ=255) aaCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtggg < 1:1325177‑M1/99‑17 (MQ=255) aCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggt < 2:1970080‑M1/99‑18 (MQ=255) cGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtg > 1:1388811‑M1/1‑81 (MQ=255) ggTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtga < 1:1443961‑M1/99‑20 (MQ=255) gTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgat > 1:2283306‑M1/1‑79 (MQ=255) tGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatg > 2:1415093‑M1/1‑78 (MQ=255) tGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatg > 2:576294‑M1/1‑78 (MQ=255) aaaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcc > 2:1886923‑M1/1‑76 (MQ=255) aaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcct < 2:1392283‑M1/99‑25 (MQ=255) aTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctt < 2:1944415‑M1/99‑26 (MQ=255) aTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctt > 1:1446579‑M1/1‑74 (MQ=255) aTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctt > 1:274719‑M1/1‑74 (MQ=255) gTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttg > 2:2316360‑M1/1‑72 (MQ=255) gTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttg > 1:1249824‑M1/1‑72 (MQ=255) gTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttg > 1:333654‑M1/1‑72 (MQ=255) tCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttga > 2:880017‑M1/1‑71 (MQ=255) aTGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaa < 2:2177158‑M1/99‑31 (MQ=255) tGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaat < 2:540283‑M1/99‑32 (MQ=255) gTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcg > 2:219010‑M1/1‑66 (MQ=255) tATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcga > 1:114150‑M1/1‑65 (MQ=255) ttGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaac < 1:799841‑M1/99‑37 (MQ=255) ttGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaac > 2:464293‑M1/1‑63 (MQ=255) gTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacag > 1:995373‑M1/1‑61 (MQ=255) ttACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacagg > 2:2270472‑M1/1‑60 (MQ=255) ttACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacagg > 2:1179746‑M1/1‑60 (MQ=255) tACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggt < 1:557845‑M1/99‑41 (MQ=255) aCGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggtt > 1:1682322‑M1/1‑58 (MQ=255) cGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttg > 2:369775‑M1/1‑57 (MQ=255) ttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggta > 1:225575‑M1/1‑54 (MQ=255) tAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtat < 2:1969737‑M1/99‑47 (MQ=255) tAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtat < 1:2294106‑M1/99‑47 (MQ=255) ggTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcg > 1:128740‑M1/1‑51 (MQ=255) tAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgca > 2:366458‑M1/1‑49 (MQ=255) tAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgca < 1:1623558‑M1/99‑51 (MQ=255) aaCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcac < 1:2329898‑M1/99‑52 (MQ=255) aCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcaca > 1:24917‑M1/1‑47 (MQ=255) aaGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacaga > 2:2269514‑M1/1‑45 (MQ=255) aGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagat > 1:36846‑M1/1‑44 (MQ=255) gAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatg > 2:2110194‑M1/1‑43 (MQ=255) gAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatg < 2:1160386‑M1/99‑57 (MQ=255) aaTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcg > 2:2277154‑M1/1‑41 (MQ=255) cTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcac < 2:1474544‑M1/99‑66 (MQ=255) tGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcacc > 1:2348332‑M1/1‑33 (MQ=255) gCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcacca < 2:838959‑M1/99‑68 (MQ=255) cacaAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccac < 1:1597942‑M1/99‑69 (MQ=255) acaAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccaca > 1:192765‑M1/1‑30 (MQ=255) acaAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccaca < 1:1942217‑M1/99‑70 (MQ=255) caAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacat > 1:2364417‑M1/1‑29 (MQ=255) caAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacat < 2:670330‑M1/99‑71 (MQ=255) aaGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacatt < 2:1455548‑M1/99‑72 (MQ=255) aGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc < 2:342292‑M1/99‑73 (MQ=255) aGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc < 1:4790‑M1/99‑73 (MQ=255) ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca > 2:1712512‑M1/1‑23 (MQ=255) ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca > 1:448610‑M1/1‑23 (MQ=255) ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca > 2:1349884‑M1/1‑23 (MQ=255) ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca < 2:103143‑M1/99‑77 (MQ=255) tACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcat > 1:1106311‑M1/1‑22 (MQ=255) aCATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatc < 1:602257‑M1/99‑79 (MQ=255) catcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgtgacggcaccacattctgcatcg > 2:1710569‑M1/1‑20 (MQ=255) catcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcg > 2:733846‑M1/1‑20 (MQ=255) tcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcg > 1:602242‑M1/1‑18 (MQ=255) catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc > 1:2192622‑M1/1‑17 (MQ=255) catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc < 1:453637‑M1/99‑83 (MQ=255) catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc < 1:1797568‑M1/99‑83 (MQ=255) tGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctg > 1:228517‑M1/1‑15 (MQ=255) tGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctg > 2:482924‑M1/1‑15 (MQ=255) gATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctga > 2:2225699‑M1/1‑14 (MQ=255) tATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaaca < 1:344326‑M1/99‑89 (MQ=255) aTGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacat < 2:55034‑M1/99‑90 (MQ=255) ggCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcg < 1:2079694‑M1/99‑92 (MQ=255) gCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgt > 2:875473‑M1/1‑7 (MQ=255) gCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgt < 1:836849‑M1/99‑93 (MQ=255) cGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtc > 1:301983‑M1/1‑6 (MQ=255) gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct < 2:259481‑M1/99‑95 (MQ=255) gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct > 1:2000352‑M1/1‑5 (MQ=255) aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc < 2:1661890‑M1/99‑96 (MQ=255) aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc > 2:1358948‑M1/1‑4 (MQ=255) aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc > 2:719219‑M1/1‑4 (MQ=255) aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc > 1:2286375‑M1/1‑4 (MQ=255) cacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgat > 2:1383824‑M1/1‑1 (MQ=255) | GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATA > NC_000913/1397282‑1397478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |