BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 807339	5 (0.060)	86 (0.970)	61/176	NT	96.1%	intergenic (‑58/+94)	ybhC/ybhB	outer membrane lipoprotein YhbC/putative kinase inhibitor
*	?	NC_000913	4171877 =	2 (0.020)	86 (0.970)	61/176	NT	96.1%	intergenic (+121/‑180)	rrfB/murB	5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

Only 100 of 106 total aligned reads displayed.

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

ccaatgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacc                                                                                                   >  1:1438067‑M2/99‑99 (MQ=255)

 gAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg                                                                                                  >  2:1089737/1‑99 (MQ=32)

 gAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg                                                                                                  <  2:1702541/99‑1 (MQ=32)

  aatgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCgg                                                                                                 >  2:1511583‑M2/97‑99 (MQ=255)

  aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                                                                 >  2:204496/1‑99 (MQ=31)

  aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                                                                 >  1:1660454/1‑99 (MQ=31)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                >  1:587140‑M2/96‑99 (MQ=255)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                >  1:214121‑M2/96‑99 (MQ=255)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                >  1:1980324‑M2/96‑99 (MQ=255)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                <  2:1909499‑M2/4‑1 (MQ=255)

     gccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGccc                                                                                              <  2:1442693‑M2/6‑1 (MQ=255)

     gccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGccc                                                                                              <  1:1779404‑M2/6‑1 (MQ=255)

         gcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAg                                                                                          >  2:219859‑M2/90‑99 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        <  2:410954‑M2/12‑1 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        >  1:1804949‑M2/88‑99 (MQ=255)

            ccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGt                                                                                       <  1:485277‑M2/13‑1 (MQ=255)

            ccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGt                                                                                       >  1:232211‑M2/87‑99 (MQ=255)

              agacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTgg                                                                                     <  2:1895540‑M2/15‑1 (MQ=255)

              agacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTgg                                                                                     <  2:199537‑M2/15‑1 (MQ=255)

                 cgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCgg                                                                                  >  1:367233‑M2/82‑99 (MQ=255)

                   ggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGc                                                                                >  1:1174075‑M2/80‑99 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               <  2:1420276‑M2/21‑1 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               >  2:2243913‑M2/79‑99 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               >  2:2356416‑M2/79‑99 (MQ=255)

                     aaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAg                                                                              >  1:1121171‑M2/78‑99 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            <  1:14198‑M2/24‑1 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            <  1:1467138‑M2/24‑1 (MQ=255)

                         tgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcg                                                                          >  2:2197428‑M2/74‑99 (MQ=255)

                          gaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgc                                                                         >  1:227994‑M2/73‑99 (MQ=255)

                          gaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgc                                                                         >  2:875525‑M2/73‑99 (MQ=255)

                          gaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgc                                                                         <  1:985204‑M2/27‑1 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        >  1:382790‑M2/72‑99 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        <  2:1788076‑M2/28‑1 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       >  2:1600613‑M2/71‑99 (MQ=255)

                             aatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccg                                                                      >  1:2279686‑M2/70‑99 (MQ=255)

                             aatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccg                                                                      >  2:708262‑M2/70‑99 (MQ=255)

                                gtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCa                                                                   <  2:1905736‑M2/33‑1 (MQ=255)

                                 tgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAt                                                                  >  2:2046005‑M2/66‑99 (MQ=255)

                                      acaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACt                                                             >  2:461342‑M2/61‑99 (MQ=255)

                                      acaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACt                                                             >  2:1097674‑M2/61‑99 (MQ=255)

                                         ggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGcc                                                          >  2:46877‑M2/58‑99 (MQ=255)

                                         ggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGCCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGcc                                                          >  2:1562472‑M2/58‑99 (MQ=255)

                                          gttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                         >  2:1834244‑M2/57‑99 (MQ=255)

                                          gttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                         >  2:1006497‑M2/57‑99 (MQ=255)

                                          gttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                         <  2:365586‑M2/43‑1 (MQ=255)

                                           ttgctccgggctatgaaatagaaaaatgaatccgttgacgcctgcttttttatacCGGCCCGGATGGCAGACGGCAGGACGCCCGCCATAAAATGCcaa                                                        >  2:474946‑M2/56‑98 (MQ=255)

                                           ttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg                                                        >  2:309652‑M2/56‑99 (MQ=255)

                                            tgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAgg                                                       <  1:2087927‑M2/45‑1 (MQ=255)

                                             gctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGc                                                      >  2:1295004‑M2/54‑99 (MQ=255)

                                             gctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGc                                                      <  2:2096863‑M2/46‑1 (MQ=255)

                                               tccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCAt                                                    <  2:2050262‑M2/48‑1 (MQ=255)

                                                      tatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTa                                             >  2:2211000‑M2/45‑99 (MQ=255)

                                                       atgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTaa                                            >  2:2339463‑M2/44‑99 (MQ=255)

                                                       atgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTaa                                            >  2:62395‑M2/44‑99 (MQ=255)

                                                        tgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAg                                           >  2:2201538‑M2/43‑99 (MQ=255)

                                                        tgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAg                                           >  2:1569689‑M2/43‑99 (MQ=255)

                                                          aaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCa                                         >  1:1244214‑M2/41‑99 (MQ=255)

                                                          aaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCa                                         >  2:1165199‑M2/41‑99 (MQ=255)

                                                           aatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAg                                        >  1:409711‑M2/40‑99 (MQ=255)

                                                             tagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                      >  2:502951‑M2/38‑99 (MQ=255)

                                                             tagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                      >  2:1082185‑M2/38‑99 (MQ=255)

                                                                 aaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGcc                                  >  1:900414‑M2/34‑99 (MQ=255)

                                                                 aaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGcc                                  <  1:1201781‑M2/66‑1 (MQ=255)

                                                                  aaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCa                                 <  2:1214096‑M2/67‑1 (MQ=255)

                                                                    atgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATc                               >  1:1781971‑M2/31‑99 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              <  1:1079741‑M2/70‑1 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              <  1:1460393‑M2/70‑1 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  2:512708‑M2/73‑1 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  1:1788693‑M2/73‑1 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  1:2176051‑M2/73‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  2:1524924‑M2/77‑1 (MQ=255)

                                                                             ttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                      <  1:928085‑M2/78‑1 (MQ=255)

                                                                               gaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATgg                    <  2:393608‑M2/80‑1 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  2:1572686‑M2/18‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  2:1035070‑M2/18‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  1:1907057‑M2/18‑99 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                >  2:1754804‑M2/16‑99 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                <  2:1496542‑M2/84‑1 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                <  2:1951847‑M2/84‑1 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                >  1:706039‑M2/16‑99 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                >  2:1801215‑M2/16‑99 (MQ=255)

                                                                                    ctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt               <  1:847310‑M2/85‑1 (MQ=255)

                                                                                     tgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtttt              >  1:2259763‑M2/14‑99 (MQ=255)

                                                                                      gcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttttt             >  1:118302‑M2/13‑99 (MQ=255)

                                                                                        ttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGc           >  2:2155920‑M2/11‑99 (MQ=255)

                                                                                         tttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg          <  1:69928‑M2/90‑1 (MQ=255)

                                                                                         tttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg          <  1:430076‑M2/90‑1 (MQ=255)

                                                                                         tttttatacCGGCCCGGAGGGTGGCGGGAAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg          <  2:813087‑M2/90‑1 (MQ=255)

                                                                                          tttttatcCCGCCCGGGGGGGGGGGGGCAGGACCCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  2:1344176‑M2/91‑1 (MQ=255)

                                                                                           tttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        <  2:1086455‑M2/92‑1 (MQ=255)

                                                                                           gAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        <  2:1747825/99‑1 (MQ=33)

                                                                                           gAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        <  2:1711137/99‑1 (MQ=33)

                                                                                            ttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGttt       >  2:1841676‑M2/7‑99 (MQ=255)

                                                                                             aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  2:672899/99‑1 (MQ=35)

                                                                                              gCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGATGGATGGCCTTTTTGCGTTTCt     <  1:177069/99‑1 (MQ=255)

                                                                                              gCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCt     >  2:862652/1‑99 (MQ=37)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:301317‑M2/96‑1 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:1480050‑M2/96‑1 (MQ=255)

                                                                                                 cCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  <  1:1525767‑M2/98‑1 (MQ=255)

                                                                                                 aCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  >  2:1086621/1‑99 (MQ=40)

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.