BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 807339	3 (0.030)	85 (0.990)	61/176	NT	97.1%	intergenic (‑58/+94)	ybhC/ybhB	outer membrane lipoprotein YhbC/putative kinase inhibitor
*	?	NC_000913	4171877 =	2 (0.020)	85 (0.990)	61/176	NT	97.1%	intergenic (+121/‑180)	rrfB/murB	5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

Only 100 of 113 total aligned reads displayed.

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

ccaatgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacc                                                                                                   <  1:366462‑M2/1‑1 (MQ=255)

cGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                                                                                                   <  1:2221579/99‑1 (MQ=33)

cGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                                                                                                   <  1:2041573/99‑1 (MQ=33)

cGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                                                                                                   <  2:2007659/99‑1 (MQ=33)

 gAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg                                                                                                  <  2:2098787/99‑1 (MQ=32)

 caatgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCg                                                                                                  <  2:421841‑M2/2‑1 (MQ=255)

  aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                                                                 <  2:56967/99‑1 (MQ=31)

  aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                                                                 >  2:2123259/1‑99 (MQ=31)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                <  1:763510‑M2/4‑1 (MQ=255)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                >  2:2278370‑M2/96‑99 (MQ=255)

      ccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCg                                                                                             <  2:8484‑M2/7‑1 (MQ=255)

      ccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCg                                                                                             >  2:1792076‑M2/93‑99 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        <  1:2206513‑M2/12‑1 (MQ=255)

                acgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCg                                                                                   >  2:1480879‑M2/83‑99 (MQ=255)

                acgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCg                                                                                   >  2:667116‑M2/83‑99 (MQ=255)

                   ggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGc                                                                                >  1:247374‑M2/80‑99 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               >  1:2246290‑M2/79‑99 (MQ=255)

                     aaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAg                                                                              >  2:1201051‑M2/78‑99 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            <  1:1178310‑M2/24‑1 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            >  1:1276799‑M2/76‑99 (MQ=255)

                        ctgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAc                                                                           >  1:1232918‑M2/75‑99 (MQ=255)

                         tgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcg                                                                          >  2:1793076‑M2/74‑99 (MQ=255)

                          gaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgc                                                                         >  2:1358385‑M2/73‑99 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        >  2:218100‑M2/72‑99 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        >  1:727147‑M2/72‑99 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        >  1:1044093‑M2/72‑99 (MQ=255)

                           aaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcc                                                                        >  2:1016674‑M2/72‑99 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       <  1:344393‑M2/29‑1 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       >  1:2134421‑M2/71‑99 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       >  2:1299345‑M2/71‑99 (MQ=255)

                             aatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccg                                                                      >  2:1177314‑M2/70‑99 (MQ=255)

                               tgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccgcc                                                                    <  2:1996775‑M2/32‑1 (MQ=255)

                                    tcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATaaa                                                               <  2:1935794‑M2/37‑1 (MQ=255)

                                     cacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc                                                              <  1:115206‑M2/38‑1 (MQ=255)

                                     cacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc                                                              <  1:1631188‑M2/38‑1 (MQ=255)

                                        aggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGc                                                           <  2:1757710‑M2/41‑1 (MQ=255)

                                          gttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                         >  1:245466‑M2/57‑99 (MQ=255)

                                           ttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg                                                        >  2:503303‑M2/56‑99 (MQ=255)

                                               tccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCAt                                                    >  1:994288‑M2/52‑99 (MQ=255)

                                               tccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCAt                                                    >  1:164450‑M2/52‑99 (MQ=255)

                                                 cgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCa                                                  >  2:1251274‑M2/50‑99 (MQ=255)

                                                     ctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAAtt                                              <  1:1525725‑M2/54‑1 (MQ=255)

                                                            atagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGa                                       <  1:321516‑M2/61‑1 (MQ=255)

                                                            atagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGa                                       >  2:2061157‑M2/39‑99 (MQ=255)

                                                             tagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                      >  2:167203‑M2/38‑99 (MQ=255)

                                                             aagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                      <  2:1596389‑M2/62‑1 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    >  1:68486‑M2/36‑99 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    >  2:1629654‑M2/36‑99 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    >  1:1937237‑M2/36‑99 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    >  2:2118947‑M2/36‑99 (MQ=255)

                                                                aaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGc                                   >  2:1512593‑M2/35‑99 (MQ=255)

                                                                 aaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGcc                                  >  2:2111935‑M2/34‑99 (MQ=255)

                                                                  aaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCa                                 <  2:1738754‑M2/67‑1 (MQ=255)

                                                                   aatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCAt                                >  2:1674615‑M2/32‑99 (MQ=255)

                                                                    atgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATc                               >  2:343015‑M2/31‑99 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              >  1:2077800‑M2/30‑99 (MQ=255)

                                                                      gaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCt                             <  2:194682‑M2/71‑1 (MQ=255)

                                                                      gaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCt                             <  2:1961070‑M2/71‑1 (MQ=255)

                                                                       aatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTg                            >  2:2010810‑M2/28‑99 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  2:1655127‑M2/73‑1 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  2:555045‑M2/73‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  1:972688‑M2/77‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  2:524177‑M2/77‑1 (MQ=255)

                                                                             ttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                      >  2:1755203‑M2/22‑99 (MQ=255)

                                                                             ttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                      >  2:111539‑M2/22‑99 (MQ=255)

                                                                              tgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATg                     <  2:186310‑M2/79‑1 (MQ=255)

                                                                              tgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATg                     >  2:1807693‑M2/21‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  2:1351528‑M2/18‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  1:248839‑M2/18‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  1:1685445‑M2/18‑99 (MQ=255)

                                                                                  gcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt                 >  2:482390‑M2/17‑99 (MQ=255)

                                                                                  gcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt                 <  1:655087‑M2/83‑1 (MQ=255)

                                                                                  gcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt                 <  2:1091016‑M2/83‑1 (MQ=255)

                                                                                    ctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt               <  2:1146724‑M2/85‑1 (MQ=255)

                                                                                     tgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtttt              <  1:488782‑M2/86‑1 (MQ=255)

                                                                                     tgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtttt              <  2:299456‑M2/86‑1 (MQ=255)

                                                                                     tgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtttt              >  1:1399207‑M2/14‑99 (MQ=255)

                                                                                      gcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttttt             <  2:677719‑M2/87‑1 (MQ=255)

                                                                                        ttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGc           <  2:76374‑M2/89‑1 (MQ=255)

                                                                                         tttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg          <  1:1205836‑M2/90‑1 (MQ=255)

                                                                                         tttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg          >  1:741841‑M2/10‑99 (MQ=255)

                                                                                          ttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  1:166350‑M2/91‑1 (MQ=255)

                                                                                          ttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  1:2159641‑M2/91‑1 (MQ=255)

                                                                                          cGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  2:83889/99‑1 (MQ=32)

                                                                                           gAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        >  1:2188634/1‑99 (MQ=33)

                                                                                            ttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGttt       >  1:245754‑M2/7‑99 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  1:263501‑M2/94‑1 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      >  2:1152871‑M2/6‑99 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  1:1357067‑M2/94‑1 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      >  2:422971‑M2/6‑99 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  2:455250‑M2/94‑1 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  1:391682‑M2/94‑1 (MQ=255)

                                                                                             aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      >  2:1056853/1‑99 (MQ=35)

                                                                                             aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      >  1:1907300/1‑99 (MQ=35)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    >  2:1166270‑M2/4‑99 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    >  2:1290116‑M2/4‑99 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:2095166‑M2/96‑1 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    >  1:2077087‑M2/4‑99 (MQ=255)

                                                                                               cAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  1:64352/99‑1 (MQ=38)

                                                                                                 aCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  >  1:1345871/1‑99 (MQ=40)

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.