BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 807339	9 (0.070)	136 (1.070)	79/176	NT	95.1%	intergenic (‑58/+94)	ybhC/ybhB	outer membrane lipoprotein YhbC/putative kinase inhibitor
*	?	NC_000913	4171877 =	5 (0.040)	136 (1.070)	79/176	NT	95.1%	intergenic (+121/‑180)	rrfB/murB	5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

Only 100 of 164 total aligned reads displayed.

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

cGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                                                                                                   <  2:569841/99‑1 (MQ=33)

  aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                                                                 >  1:1557873/1‑99 (MQ=31)

   atgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGc                                                                                                <  1:197750‑M2/4‑1 (MQ=255)

    tgccagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGcc                                                                                               >  2:711732‑M2/95‑99 (MQ=255)

       cagcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCgg                                                                                            >  1:401346‑M2/92‑99 (MQ=255)

         gcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAg                                                                                          <  2:106981‑M2/10‑1 (MQ=255)

         gcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAg                                                                                          >  2:587364‑M2/90‑99 (MQ=255)

         gcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAg                                                                                          >  1:542730‑M2/90‑99 (MQ=255)

         gcgccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAg                                                                                          <  2:2326316‑M2/10‑1 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        <  1:223510‑M2/12‑1 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        >  1:1405573‑M2/88‑99 (MQ=255)

           gccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAggg                                                                                        >  1:127508‑M2/88‑99 (MQ=255)

            ccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGt                                                                                       >  1:1399648‑M2/87‑99 (MQ=255)

            ccagacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGt                                                                                       >  1:1316480‑M2/87‑99 (MQ=255)

              agacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTgg                                                                                     >  1:1696309‑M2/85‑99 (MQ=255)

              agacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTgg                                                                                     <  1:535429‑M2/15‑1 (MQ=255)

               gacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGc                                                                                    >  2:1954418‑M2/84‑99 (MQ=255)

               gacgggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGc                                                                                    >  1:2047669‑M2/84‑99 (MQ=255)

                   ggaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGc                                                                                >  1:882959‑M2/80‑99 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               <  2:2638831‑M2/21‑1 (MQ=255)

                    gaaactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCa                                                                               <  1:1033463‑M2/21‑1 (MQ=255)

                      aactgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGACCCGGAGGGTGGCGGGCAgg                                                                             >  1:1912742‑M2/77‑99 (MQ=255)

                      aactgaaaatgtattcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCCGCCCGCAGGGTCGcaggcagg                                                                             >  2:2614171‑M2/77‑99 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            >  2:2019488‑M2/76‑99 (MQ=255)

                       actgaaaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGa                                                                            >  2:1696286‑M2/76‑99 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       <  1:988433‑M2/29‑1 (MQ=255)

                            aaatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgccc                                                                       >  1:621660‑M2/71‑99 (MQ=255)

                             aatgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccg                                                                      >  2:482055‑M2/70‑99 (MQ=255)

                              atgtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGAcgcccgc                                                                     >  1:2287510‑M2/69‑99 (MQ=255)

                                ttgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCa                                                                   <  2:513829‑M2/33‑1 (MQ=255)

                                gtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCa                                                                   <  1:706279‑M2/33‑1 (MQ=255)

                                gtgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCa                                                                   <  1:2693616‑M2/33‑1 (MQ=255)

                                 tgttcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAt                                                                  >  2:1010982‑M2/66‑99 (MQ=255)

                                    tcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATaaa                                                               <  2:360940‑M2/37‑1 (MQ=255)

                                    tcacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATaaa                                                               <  2:1689418‑M2/37‑1 (MQ=255)

                                     cacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc                                                              >  2:2474846‑M2/62‑99 (MQ=255)

                                     cacaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc                                                              <  2:611221‑M2/38‑1 (MQ=255)

                                      acaggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACt                                                             >  1:2962818‑M2/61‑99 (MQ=255)

                                       caggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTg                                                            >  1:1788942‑M2/60‑99 (MQ=255)

                                       caggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTg                                                            >  2:1551406‑M2/60‑99 (MQ=255)

                                         ggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGcc                                                          >  1:2067438‑M2/58‑99 (MQ=255)

                                         ggttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGcc                                                          >  1:1291789‑M2/58‑99 (MQ=255)

                                          gttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                         <  2:3298159‑M2/43‑1 (MQ=255)

                                           ttgctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg                                                        >  2:833870‑M2/56‑99 (MQ=255)

                                              ctccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCa                                                     >  2:185480‑M2/53‑99 (MQ=255)

                                                ccgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATc                                                   <  1:1923580‑M2/49‑1 (MQ=255)

                                                 cgggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCa                                                  <  2:718929‑M2/50‑1 (MQ=255)

                                                  gggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCaa                                                 >  1:1483923‑M2/49‑99 (MQ=255)

                                                   ggctatgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCaaa                                                <  2:3218095‑M2/52‑1 (MQ=255)

                                                       atgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTaa                                            >  1:2622159‑M2/44‑99 (MQ=255)

                                                        tgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAg                                           >  1:907602‑M2/43‑99 (MQ=255)

                                                        tgaaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAg                                           >  2:3195884‑M2/43‑99 (MQ=255)

                                                          aaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCa                                         >  1:73445‑M2/41‑99 (MQ=255)

                                                          aaatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCa                                         >  2:3294456‑M2/41‑99 (MQ=255)

                                                           aatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAg                                        >  2:1019647‑M2/40‑99 (MQ=255)

                                                           aatagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAg                                        >  1:3302429‑M2/40‑99 (MQ=255)

                                                            atagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGa                                       >  1:2996719‑M2/39‑99 (MQ=255)

                                                             tagaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGaa                                      >  2:2587951‑M2/38‑99 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    <  2:3261506‑M2/64‑1 (MQ=255)

                                                               gaaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAgg                                    >  2:1806701‑M2/36‑99 (MQ=255)

                                                                aaaaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGc                                   >  1:2710077‑M2/35‑99 (MQ=255)

                                                                  aaatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCa                                 >  2:2789084‑M2/33‑99 (MQ=255)

                                                                   aatgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCAt                                >  2:909273‑M2/32‑99 (MQ=255)

                                                                    atgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATc                               >  1:3044583‑M2/31‑99 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              <  1:1117568‑M2/70‑1 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              >  1:3313734‑M2/30‑99 (MQ=255)

                                                                     tgaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATcc                              <  1:482373‑M2/70‑1 (MQ=255)

                                                                      gaatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCt                             <  2:985741‑M2/71‑1 (MQ=255)

                                                                       aatccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTg                            >  1:3115638‑M2/28‑99 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGCCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           >  1:500109‑M2/27‑99 (MQ=255)

                                                                        atccgttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa                           <  1:391179‑M2/73‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  1:2529257‑M2/77‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  1:3372461‑M2/77‑1 (MQ=255)

                                                                            gttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa                       <  2:2630814‑M2/77‑1 (MQ=255)

                                                                             ttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                      >  1:395393‑M2/22‑99 (MQ=255)

                                                                             ttgaagcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAt                      >  1:2153248‑M2/22‑99 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  <  2:274778‑M2/82‑1 (MQ=255)

                                                                                 agcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGcc                  >  1:283412‑M2/18‑99 (MQ=255)

                                                                                  gcctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt                 <  1:1623446‑M2/83‑1 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                <  2:1661970‑M2/84‑1 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                <  2:1773351‑M2/84‑1 (MQ=255)

                                                                                   cctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtt                <  2:2523083‑M2/84‑1 (MQ=255)

                                                                                    ctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt               >  2:1446032‑M2/15‑99 (MQ=255)

                                                                                    ctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt               >  1:180588‑M2/15‑99 (MQ=255)

                                                                                    ctgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt               <  2:2289316‑M2/85‑1 (MQ=255)

                                                                                     tgcttttttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCtttt              <  2:946236‑M2/86‑1 (MQ=255)

                                                                                          cGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  2:2802502/99‑1 (MQ=32)

                                                                                          cGAACCAACGGCCCGGGGGGTGGGGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt         <  2:1496937/99‑1 (MQ=255)

                                                                                           tttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        <  2:1096962‑M2/92‑1 (MQ=255)

                                                                                           tttatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt        <  2:1106377‑M2/92‑1 (MQ=255)

                                                                                             tatacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc      <  1:2529011‑M2/94‑1 (MQ=255)

                                                                                             tatacCGGCCCAGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGGCATCGTGACGGATGGCCTTTTTGCGTTTc      <  2:598236‑M2/94‑1 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:2149574‑M2/96‑1 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  1:2406619‑M2/96‑1 (MQ=255)

                                                                                               tacCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:1192630‑M2/96‑1 (MQ=255)

                                                                                               taaCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    >  2:574266/2‑99 (MQ=38)

                                                                                               cAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTa    <  2:649940/99‑1 (MQ=38)

                                                                                                 aCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  <  1:3020514/99‑1 (MQ=40)

                                                                                                 aCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  <  2:1590536/99‑1 (MQ=40)

                                                                                                 aCGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa  >  1:898489/1‑99 (MQ=40)

CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACA  >  NC_000913/4171779‑4171974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.