| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,535,825 | G→T | 100% | T15K (ACG→AAG) | envZ ← | sensory histidine kinase EnvZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,535,825 | 0 | G | T | 100.0% | 508.1 / NA | 119 | T15K (ACG→AAG) | envZ | sensory histidine kinase EnvZ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (67/52); total (67/52) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 119 total aligned reads displayed.
TTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAA > NC_000913/3535729‑3535920 | ttaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTa < 1:1552221/99‑1 (MQ=255)ttaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTa < 1:79039/99‑1 (MQ=255) aaCTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACgg > 1:2538472/1‑99 (MQ=255) aaCTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACgg > 1:1475093/1‑99 (MQ=255) ctgGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCaaa < 2:2354324/99‑1 (MQ=255) ctgGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCaaa > 2:2116828/1‑99 (MQ=255) gAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGa > 1:920555/1‑99 (MQ=255) ggCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAAc > 1:2895675/1‑99 (MQ=255) ggCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAAc > 1:3087288/1‑99 (MQ=255) ggCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAAc > 2:2650072/1‑99 (MQ=255) ggCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAAc > 2:2426542/1‑99 (MQ=255) ggCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAAc > 2:1223035/1‑99 (MQ=255) gCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACt < 2:1285573/99‑1 (MQ=255) gCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACt < 2:1674632/99‑1 (MQ=255) cTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACtt < 2:341638/99‑1 (MQ=255) cTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACtt < 1:762386/99‑1 (MQ=255) cTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACtt < 1:1656649/99‑1 (MQ=255) cGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCg < 1:2652696/99‑1 (MQ=255) ggCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGt > 2:2189217/1‑99 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTg > 1:2065912/1‑99 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTg > 1:441702/1‑99 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTg < 2:3028918/99‑1 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTg > 1:292774/1‑99 (MQ=255) ccaaaTCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTgg < 1:1967273/97‑1 (MQ=255) cAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTgg < 1:2749118/99‑1 (MQ=255) aaaaTCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGc > 1:692413/1‑99 (MQ=255) aTCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCgag > 2:2308186/1‑99 (MQ=255) aTCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCgag > 1:464992/1‑99 (MQ=255) tCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCgaga > 1:1560249/1‑99 (MQ=255) tCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCgaga > 1:1306322/1‑99 (MQ=255) tCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCgaga > 2:2902119/1‑99 (MQ=255) cgcgAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGaa < 2:969364/99‑1 (MQ=255) cgcgAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGaa < 2:1782489/99‑1 (MQ=255) gAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAgcg > 2:3245805/1‑99 (MQ=255) gTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCaa < 1:2723815/99‑1 (MQ=255) ttCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAAt < 2:125366/99‑1 (MQ=255) ttCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAAt < 1:24490/99‑1 (MQ=255) gCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGcc < 2:1883188/99‑1 (MQ=255) gCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGcc > 2:2428722/1‑99 (MQ=255) gCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGcc > 2:2729276/1‑99 (MQ=255) accaccAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTc > 2:521419/1‑99 (MQ=255) accaccAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTc < 1:1475688/99‑1 (MQ=255) ccaccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCa > 1:1079727/1‑99 (MQ=255) ccaccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCa < 1:442327/99‑1 (MQ=255) caccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCAt < 1:788350/99‑1 (MQ=255) caccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCAt < 1:2585547/99‑1 (MQ=255) accaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATg < 1:1006232/99‑1 (MQ=255) accaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATg > 2:3214375/1‑99 (MQ=255) ccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGc < 1:1644333/99‑1 (MQ=255) ccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGc > 1:3199987/1‑99 (MQ=255) caGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCt < 2:790988/99‑1 (MQ=255) aGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCtt < 2:2858660/99‑1 (MQ=255) tAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTag > 2:2227715/1‑99 (MQ=255) aaGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTaga < 1:829511/99‑1 (MQ=255) aaGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTaga > 2:961978/1‑99 (MQ=255) aGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTagag > 2:3021695/1‑99 (MQ=255) aGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTagag > 2:1964050/1‑99 (MQ=255) gtcgtcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGc < 1:3366150/99‑1 (MQ=255) gtcgtcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGc < 2:3144323/99‑1 (MQ=255) tcgtcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGcc > 2:759446/1‑99 (MQ=255) gtcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGt > 1:757888/1‑99 (MQ=255) tcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTc > 1:638331/1‑99 (MQ=255) ccAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCgg > 1:2952599/1‑99 (MQ=255) ccAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCgg < 2:2222170/99‑1 (MQ=255) ggCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTAc > 1:2539752/1‑99 (MQ=255) ggCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTAc > 1:2327649/1‑99 (MQ=255) ggCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTAc > 1:1767406/1‑99 (MQ=255) gCTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACa > 1:49615/1‑99 (MQ=255) cTGGCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACaa < 1:2041342/99‑1 (MQ=255) gCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGa < 1:2707890/99‑1 (MQ=255) gCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGa < 2:2531781/99‑1 (MQ=255) gCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGa > 1:1163265/1‑99 (MQ=255) gCGAACAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGa < 2:2850166/99‑1 (MQ=255) cAGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAg < 1:1794697/99‑1 (MQ=255) aGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGc < 1:1777632/99‑1 (MQ=255) aGCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGc < 2:1631609/99‑1 (MQ=255) gCAAGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcc > 1:477472/1‑99 (MQ=255) aaGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGccca < 2:419654/99‑1 (MQ=255) aGGTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccag > 1:1202094/1‑99 (MQ=255) ggTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccaga > 1:3048923/1‑99 (MQ=255) ggTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccaga > 1:375281/1‑99 (MQ=255) gTGACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagac > 1:2659873/1‑99 (MQ=255) gACGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagaccc < 2:456524/99‑1 (MQ=255) aCGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagacccc > 2:146457/1‑99 (MQ=255) cGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagacccca > 2:3330566/1‑99 (MQ=255) cGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagacccca > 2:2103489/1‑99 (MQ=255) cGATGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagacccca > 1:2375850/1‑99 (MQ=255) aTGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagaccccaga < 1:3319703/99‑1 (MQ=255) tGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagaccccagac > 2:92108/1‑99 (MQ=255) tGAGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGcccagaccccagac > 1:869027/1‑99 (MQ=255) aGCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACgg > 2:2404485/1‑99 (MQ=255) gCAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGt > 2:657498/1‑99 (MQ=255) cAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTc > 1:578828/1‑99 (MQ=255) cAATAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTc < 1:1169386/99‑1 (MQ=255) aaTAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCt < 1:1079862/99‑1 (MQ=255) aaTAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCt < 2:596086/99‑1 (MQ=255) tAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGa > 2:1508617/1‑99 (MQ=255) tAACTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGa > 1:2070291/1‑99 (MQ=255) aaCTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGaa > 2:1466329/1‑99 (MQ=255) aaCTTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGaa < 1:1988960/99‑1 (MQ=255) | TTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAA > NC_000913/3535729‑3535920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |