New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8073392 (0.020)106 (1.050) 70/176 NT 96.8% intergenic (‑58/+94) ybhC/ybhB outer membrane lipoprotein YhbC/putative kinase inhibitor
?NC_000913 4171877 = 5 (0.050)intergenic (+121/‑180) rrfB/murB 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

Only 100 of 122 total aligned reads displayed.

GCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAC  >  NC_000913/807241‑807437
                                                                                                  |                                                                                                  
gCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATAc                                                                                                    <  1:603645/99‑1 (MQ=255)
 ccAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACc                                                                                                   <  2:802582‑M1/99‑2 (MQ=255)
 ccAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACc                                                                                                   <  2:2418206‑M1/99‑2 (MQ=255)
  cAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcg                                                                                                  >  2:26652‑M1/1‑97 (MQ=255)
    aTGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggc                                                                                                >  1:884946‑M1/1‑95 (MQ=255)
    aTGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggc                                                                                                >  2:174301‑M1/1‑95 (MQ=255)
      gCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggccc                                                                                              <  1:2439930‑M1/99‑7 (MQ=255)
       ccAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccg                                                                                             >  1:2245411‑M1/1‑92 (MQ=255)
          gcgcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggag                                                                                          >  2:1463789‑M1/1‑89 (MQ=255)
          gcgcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggag                                                                                          >  1:63297‑M1/1‑89 (MQ=255)
          gcgcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggag                                                                                          >  1:1806746‑M1/1‑89 (MQ=255)
           cgcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagg                                                                                         <  2:219372‑M1/99‑12 (MQ=255)
              cAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtg                                                                                      >  2:1435375‑M1/1‑85 (MQ=255)
                gACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggc                                                                                    >  2:1502380‑M1/1‑83 (MQ=255)
                gACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggc                                                                                    >  1:792800‑M1/1‑83 (MQ=255)
                 aCGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcg                                                                                   >  2:1481493‑M1/1‑82 (MQ=255)
                    ggAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggc                                                                                >  1:2244381‑M1/1‑79 (MQ=255)
                     gAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggca                                                                               >  2:56173‑M1/1‑78 (MQ=255)
                      aaaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcag                                                                              <  1:916685‑M1/99‑23 (MQ=255)
                      aaaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcag                                                                              >  2:1997605‑M1/1‑77 (MQ=255)
                      aaaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcag                                                                              >  1:393929‑M1/1‑77 (MQ=255)
                       aaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagg                                                                             >  2:2390834‑M1/1‑76 (MQ=255)
                       aaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagg                                                                             >  1:1667556‑M1/1‑76 (MQ=255)
                        aCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagga                                                                            >  2:11206‑M1/1‑75 (MQ=255)
                        aCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagga                                                                            >  2:2282174‑M1/1‑75 (MQ=255)
                        aCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagga                                                                            <  2:2515358‑M1/99‑25 (MQ=255)
                            aaaaTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcc                                                                        <  1:1613814‑M1/99‑29 (MQ=255)
                            aaaaTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcc                                                                        >  2:1919931‑M1/1‑71 (MQ=255)
                             aaaTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgccc                                                                       >  2:2217023‑M1/1‑70 (MQ=255)
                             aaaTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgccc                                                                       >  2:2534682‑M1/1‑70 (MQ=255)
                                 gtgtTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgcca                                                                   <  1:2081721‑M1/99‑34 (MQ=255)
                                 gtgtTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgcca                                                                   <  2:1938769‑M1/99‑34 (MQ=255)
                                    ttCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataa                                                                >  1:2377547‑M1/1‑63 (MQ=255)
                                     tCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaa                                                               <  1:1600577‑M1/99‑38 (MQ=255)
                                       acaGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaact                                                             >  1:1369412‑M1/1‑60 (MQ=255)
                                         aGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgc                                                           <  2:832019‑M1/99‑42 (MQ=255)
                                         aGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgc                                                           <  2:2517981‑M1/99‑42 (MQ=255)
                                            ttGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccag                                                        >  1:338723‑M1/1‑55 (MQ=255)
                                               cTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggca                                                     <  2:500798‑M1/99‑48 (MQ=255)
                                                    ggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaa                                                <  1:685499‑M1/99‑53 (MQ=255)
                                                    ggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaa                                                <  2:1005321‑M1/99‑53 (MQ=255)
                                                    ggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaa                                                <  1:135783‑M1/99‑53 (MQ=255)
                                                     gCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaat                                               >  1:130453‑M1/1‑46 (MQ=255)
                                                     gCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaat                                               >  1:583716‑M1/1‑46 (MQ=255)
                                                       tATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaatta                                             >  1:2103628‑M1/1‑44 (MQ=255)
                                                       tATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaatta                                             >  2:1561839‑M1/1‑44 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           >  1:1654230‑M1/1‑42 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           <  2:1277709‑M1/99‑58 (MQ=255)
                                                           aaaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagca                                         >  1:2025748‑M1/1‑40 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  2:923968‑M1/1‑39 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  2:1476167‑M1/1‑39 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  2:1275667‑M1/1‑39 (MQ=255)
                                                              tAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaa                                      >  2:644107‑M1/1‑37 (MQ=255)
                                                              tAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaa                                      >  2:1638156‑M1/1‑37 (MQ=255)
                                                                gAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaagg                                    <  1:1377404‑M1/99‑65 (MQ=255)
                                                                gAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaagg                                    >  2:2338230‑M1/1‑35 (MQ=255)
                                                                gAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaagg                                    >  1:825376‑M1/1‑35 (MQ=255)
                                                                 aaaaaTGAATCCGTTGAGGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggc                                   <  2:310539‑M1/99‑66 (MQ=255)
                                                                 aaaaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggc                                   >  2:1737964‑M1/1‑34 (MQ=255)
                                                                  aaaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcc                                  >  1:169245‑M1/1‑33 (MQ=255)
                                                                  aaaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcc                                  >  2:1716484‑M1/1‑33 (MQ=255)
                                                                   aaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcca                                 >  1:1137680‑M1/1‑32 (MQ=255)
                                                                   aaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcca                                 <  2:1596368‑M1/99‑68 (MQ=255)
                                                                    aaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccat                                >  1:839110‑M1/1‑31 (MQ=255)
                                                                    aaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccat                                >  2:2544161‑M1/1‑31 (MQ=255)
                                                                     aTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatc                               <  2:754851‑M1/99‑70 (MQ=255)
                                                                      tGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcc                              >  2:1701374‑M1/1‑29 (MQ=255)
                                                                      tGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcc                              <  1:86881‑M1/99‑71 (MQ=255)
                                                                       gAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcct                             <  2:1895759‑M1/99‑72 (MQ=255)
                                                                       gAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcct                             <  1:1503286‑M1/99‑72 (MQ=255)
                                                                         aTCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctga                           <  1:396731‑M1/99‑74 (MQ=255)
                                                                          tCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgac                          >  1:149321‑M1/1‑25 (MQ=255)
                                                                               tGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatg                     >  1:579922‑M1/1‑20 (MQ=255)
                                                                                gAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatgg                    <  2:273895‑M1/99‑81 (MQ=255)
                                                                                  aGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcc                  <  2:433628‑M1/99‑83 (MQ=255)
                                                                                  aGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcc                  <  2:2276414‑M1/99‑83 (MQ=255)
                                                                                   gCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcct                 >  1:2348962‑M1/1‑16 (MQ=255)
                                                                                    ccTGCTTTTTTATCCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctt                <  2:1513401‑M1/99‑85 (MQ=255)
                                                                                    ccTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctt                <  1:2435081‑M1/99‑85 (MQ=255)
                                                                                    ccTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctt                <  1:1438509‑M1/99‑85 (MQ=255)
                                                                                     cTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggccttt               <  2:2441738‑M1/99‑86 (MQ=255)
                                                                                     cTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggccttt               >  1:2578006‑M1/1‑14 (MQ=255)
                                                                                      tGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttt              <  2:863118‑M1/99‑87 (MQ=255)
                                                                                      tGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttt              <  2:1541434‑M1/99‑87 (MQ=255)
                                                                                      tGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttt              <  1:833158‑M1/99‑87 (MQ=255)
                                                                                        cTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttg            >  1:2342929‑M1/1‑11 (MQ=255)
                                                                                        cTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttg            <  2:1931895‑M1/99‑89 (MQ=255)
                                                                                         ttttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgc           <  2:1077398‑M1/99‑90 (MQ=255)
                                                                                         ttttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgc           >  2:85728‑M1/1‑10 (MQ=255)
                                                                                         ttttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgc           <  1:1934979‑M1/99‑90 (MQ=255)
                                                                                          tttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcg          <  2:248489‑M1/99‑91 (MQ=255)
                                                                                           ttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgt         >  1:299796‑M1/1‑8 (MQ=255)
                                                                                             ttATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGa       >  1:1271801/1‑99 (MQ=255)
                                                                                               ataCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttct     <  1:91406‑M1/99‑96 (MQ=255)
                                                                                                taCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTa    >  2:329664/1‑99 (MQ=255)
                                                                                                 aCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttctac   >  2:759906‑M1/1‑2 (MQ=255)
                                                                                                 aCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttctac   <  2:762580‑M1/99‑98 (MQ=255)
                                                                                                 aCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTaa   <  2:445505/99‑1 (MQ=255)
                                                                                                  ccggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttctaca  >  2:354252‑M1/1‑1 (MQ=255)
                                                                                                  cTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAc  >  1:2423050/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
GCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAC  >  NC_000913/807241‑807437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.