New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 8073391 (0.010)76 (0.860) 61/176 NT 96.2% intergenic (‑58/+94) ybhC/ybhB outer membrane lipoprotein YhbC/putative kinase inhibitor
?NC_000913 4171877 = 5 (0.060)intergenic (+121/‑180) rrfB/murB 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

GCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAC  >  NC_000913/807241‑807437
                                                                                                  |                                                                                                  
gCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATAc                                                                                                    <  2:1459286/99‑1 (MQ=255)
gCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATAc                                                                                                    <  2:756531/99‑1 (MQ=255)
gCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATAc                                                                                                    >  2:1705045/1‑99 (MQ=255)
   aaTGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcgg                                                                                                 >  2:400602‑M1/1‑96 (MQ=255)
   aaTGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcgg                                                                                                 >  1:1603953‑M1/1‑96 (MQ=255)
    aTGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggc                                                                                                >  2:1602905‑M1/1‑95 (MQ=255)
       ccAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccg                                                                                             <  2:1434370‑M1/99‑8 (MQ=255)
         aGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccgga                                                                                           >  1:251844‑M1/1‑90 (MQ=255)
            gcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggaggg                                                                                        <  1:390709‑M1/99‑13 (MQ=255)
            gcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggaggg                                                                                        >  1:48311‑M1/1‑87 (MQ=255)
            gcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggaggg                                                                                        <  1:2164555‑M1/99‑13 (MQ=255)
            gcCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggaggg                                                                                        >  2:1997222‑M1/1‑87 (MQ=255)
              cAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtg                                                                                      >  1:633793‑M1/1‑85 (MQ=255)
               aGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtgg                                                                                     >  1:2113744‑M1/1‑84 (MQ=255)
                 aCGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcg                                                                                   >  1:192757‑M1/1‑82 (MQ=255)
                    ggAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggc                                                                                >  1:1871667‑M1/1‑79 (MQ=255)
                     gAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggca                                                                               <  1:283071‑M1/99‑22 (MQ=255)
                       aaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagg                                                                             >  2:403361‑M1/1‑76 (MQ=255)
                       aaCTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcagg                                                                             <  2:1377194‑M1/99‑24 (MQ=255)
                          tGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacg                                                                          >  1:1658980‑M1/1‑73 (MQ=255)
                          tGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacg                                                                          >  1:725225‑M1/1‑73 (MQ=255)
                           gAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgc                                                                         <  2:1174373‑M1/99‑28 (MQ=255)
                             aaaTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgccc                                                                       <  1:98786‑M1/99‑30 (MQ=255)
                               aTGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgc                                                                     <  2:390631‑M1/99‑32 (MQ=255)
                                 gtgtTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgcca                                                                   >  1:1743780‑M1/1‑66 (MQ=255)
                                    ttCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataa                                                                <  1:1278555‑M1/99‑37 (MQ=255)
                                    ttCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataa                                                                >  2:1442087‑M1/1‑63 (MQ=255)
                                     tCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaa                                                               <  1:496734‑M1/99‑38 (MQ=255)
                                      cacaGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaac                                                              <  2:568590‑M1/99‑39 (MQ=255)
                                        caGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactg                                                            >  1:898223‑M1/1‑59 (MQ=255)
                                           gTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgcca                                                         >  2:1810410‑M1/1‑56 (MQ=255)
                                           gTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgcca                                                         <  2:1402376‑M1/99‑44 (MQ=255)
                                            ttGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccag                                                        <  1:927665‑M1/99‑45 (MQ=255)
                                              gCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggc                                                      >  2:2177290‑M1/1‑53 (MQ=255)
                                              gCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggc                                                      >  2:276033‑M1/1‑53 (MQ=255)
                                              gCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggc                                                      <  1:1639789‑M1/99‑47 (MQ=255)
                                                   gggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaa                                                 >  2:284560‑M1/1‑48 (MQ=255)
                                                    ggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaa                                                <  1:1135589‑M1/99‑53 (MQ=255)
                                                    ggCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaa                                                <  2:1911622‑M1/99‑53 (MQ=255)
                                                      cTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaatt                                              <  2:1437657‑M1/99‑55 (MQ=255)
                                                        aTGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaa                                            >  1:358291‑M1/1‑43 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           <  2:1702409‑M1/99‑58 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           <  1:1500041‑M1/99‑58 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           <  1:237256‑M1/99‑58 (MQ=255)
                                                         tGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaag                                           >  2:2040598‑M1/1‑42 (MQ=255)
                                                           aaaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagca                                         >  2:1821045‑M1/1‑40 (MQ=255)
                                                           aaaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagca                                         >  1:1275658‑M1/1‑40 (MQ=255)
                                                           aaaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcgacccggagggtggcgggcaggacgcccgccataacctgccaggcatcaaattaagca                                         >  2:2224207‑M1/1‑40 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  2:1210231‑M1/1‑39 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        <  2:2344002‑M1/99‑61 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  1:2168969‑M1/1‑39 (MQ=255)
                                                            aaTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcag                                        >  1:1855205‑M1/1‑39 (MQ=255)
                                                             aTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcaga                                       >  2:1100085‑M1/1‑38 (MQ=255)
                                                             aTAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcaga                                       <  1:845900‑M1/99‑62 (MQ=255)
                                                              tAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaa                                      >  1:1646207‑M1/1‑37 (MQ=255)
                                                               aGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaag                                     <  2:980041‑M1/99‑64 (MQ=255)
                                                                gAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaagg                                    >  1:2051420‑M1/1‑35 (MQ=255)
                                                                 aaaaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggc                                   >  1:105001‑M1/1‑34 (MQ=255)
                                                                  aaaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcc                                  >  1:2006572‑M1/1‑33 (MQ=255)
                                                                   aaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcca                                 >  2:2001618‑M1/1‑32 (MQ=255)
                                                                   aaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcca                                 <  2:1069707‑M1/99‑68 (MQ=255)
                                                                   aaaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggcca                                 <  1:699231‑M1/99‑68 (MQ=255)
                                                                    aaTGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccat                                <  1:2328951‑M1/99‑69 (MQ=255)
                                                                      tGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcc                              >  1:1067647‑M1/1‑29 (MQ=255)
                                                                      tGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcc                              >  1:39084‑M1/1‑29 (MQ=255)
                                                                      tGAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcc                              <  2:1153453‑M1/99‑71 (MQ=255)
                                                                       gAATCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcct                             <  2:1911125‑M1/99‑72 (MQ=255)
                                                                         aTCCGTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctga                           >  2:927236‑M1/1‑26 (MQ=255)
                                                                             gTTGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacgga                       >  1:1795585‑M1/1‑22 (MQ=255)
                                                                              ttGAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggat                      <  1:606352‑M1/99‑79 (MQ=255)
                                                                                gAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatgg                    >  2:813641‑M1/1‑19 (MQ=255)
                                                                                gAAGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatgg                    <  1:681192‑M1/99‑81 (MQ=255)
                                                                                 aaGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggc                   <  1:1593946‑M1/99‑82 (MQ=255)
                                                                                 aaGCCTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggc                   >  1:782414‑M1/1‑18 (MQ=255)
                                                                                    ccTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctt                <  2:282637‑M1/99‑85 (MQ=255)
                                                                                     cTGCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggccttt               <  1:238019‑M1/99‑86 (MQ=255)
                                                                                       gCTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggccttttt             <  1:323824‑M1/99‑88 (MQ=255)
                                                                                        cTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttg            >  2:1281761‑M1/1‑11 (MQ=255)
                                                                                        cTTTTTTATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggccgttttg            >  2:2253923‑M1/1‑11 (MQ=255)
                                                                                         ctccttATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCaga           <  2:1922041/95‑1 (MQ=255)
                                                                                           ttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgt         <  1:349034‑M1/99‑92 (MQ=255)
                                                                                           ttttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgt         <  2:1697549‑M1/99‑92 (MQ=255)
                                                                                            tttATACcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtt        <  1:210064‑M1/99‑93 (MQ=255)
                                                                                              tataCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttc      <  2:1477399‑M1/99‑95 (MQ=255)
                                                                                              tataCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttc      <  2:2030932‑M1/99‑95 (MQ=255)
                                                                                              tataCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGAt      <  2:1965333/99‑1 (MQ=255)
                                                                                               ataCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGAtt     <  2:260512/99‑1 (MQ=255)
                                                                                               ataCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGAtt     <  2:673616/99‑1 (MQ=255)
                                                                                               ataCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGAtt     <  2:1228257/99‑1 (MQ=255)
                                                                                                taCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttcta    <  2:1338962‑M1/99‑97 (MQ=255)
                                                                                                taCTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTa    >  1:1544511/1‑99 (MQ=255)
                                                                                                 aCcggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttctac   <  2:620242‑M1/99‑98 (MQ=255)
                                                                                                  ccggcccggagggtggcgggcaggacgcccgccataaactgccaggcatcaaattaagcagaaggccatcctgacggatggcctttttgcgtttctaca  >  2:2317973‑M1/1‑1 (MQ=255)
                                                                                                  cTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAc  >  1:278117/1‑99 (MQ=255)
                                                                                                  cTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAc  <  1:721854/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
GCCAATGCCAGCGCCAGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGCCATCTGGCAGAGTGATTAAC  >  NC_000913/807241‑807437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.