| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542682 = | 25 (0.280) | 63 (0.790) | 50/158 | NT | 73.5% | intergenic (+49/‑433) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | 4542996 = | 23 (0.290) | intergenic (+363/‑119) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||
Only 100 of 224 total aligned reads displayed.
GGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTA > NC_000913/4542584‑4542780 | gggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAAT < 1:1818294‑M1/99‑1 (MQ=255) ggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATT > 2:1875877‑M1/1‑99 (MQ=255) ggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATT > 2:535981‑M1/1‑99 (MQ=255) ggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATT < 1:1401217‑M1/99‑1 (MQ=255) atttctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattt > 2:934080‑M1/98‑99 (MQ=255) tttctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTg < 1:1686414‑M1/3‑1 (MQ=255) gaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTG < 1:801988‑M1/99‑1 (MQ=255) tctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTggg > 1:701715‑M1/95‑99 (MQ=255) ctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTgggg < 2:1353855‑M1/6‑1 (MQ=255) agaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGG < 1:1737751‑M1/99‑1 (MQ=255) aaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGcc < 1:1865285‑M1/8‑1 (MQ=255) aaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGcc > 2:432608‑M1/92‑99 (MQ=255) aatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactaccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑a < 2:775590‑M1/9‑1 (MQ=255) aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑A < 1:565360‑M1/99‑1 (MQ=255) ataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAA‑TGGGGCC‑Att < 2:205988‑M1/99‑3 (MQ=255) tcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑aaa > 2:1072856‑M1/89‑99 (MQ=255) aatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attt < 1:2280560‑M1/99‑4 (MQ=255) ctcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttga < 2:1442925‑M1/99‑7 (MQ=255) tcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgac < 1:1466305‑M1/99‑8 (MQ=255) atgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTc < 1:45465‑M1/16‑1 (MQ=255) tgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTcc < 2:560003‑M1/17‑1 (MQ=255) tgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTcc < 2:284615‑M1/17‑1 (MQ=255) gggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCa > 2:1924916‑M1/82‑99 (MQ=255) aTAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCa < 1:624745/99‑1 (MQ=255) gtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCa > 1:343477‑M1/77‑99 (MQ=255) gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagag < 2:625122‑M1/99‑16 (MQ=255) cgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCata > 2:2153331‑M1/75‑99 (MQ=255) aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagagg > 1:1902288‑M1/1‑83 (MQ=255) aaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCataa > 1:1169956/1‑99 (MQ=255) aaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCataa > 1:711598/1‑99 (MQ=255) ttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCataaa > 1:979541‑M1/73‑99 (MQ=255) tctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCataaat < 1:509747‑M1/28‑1 (MQ=255) tAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagca < 2:1255050‑M1/99‑23 (MQ=255) aaaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcat < 2:1816880‑M1/99‑24 (MQ=255) aaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatc > 1:2305682‑M1/1‑75 (MQ=255) aagagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGAGCC‑Attttgactcatagaggaaagcatcgc > 1:307803‑M1/1‑73 (MQ=255) agagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACg > 2:1071605/1‑99 (MQ=255) agagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACg > 1:1497489/1‑99 (MQ=255) agagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAA‑TGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGt > 2:2312131/1‑99 (MQ=255) agaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcgga < 1:857982‑M1/99‑30 (MQ=255) agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaa > 2:609853‑M1/1‑67 (MQ=255) gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaac < 1:662573‑M1/99‑34 (MQ=255) ggTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTAtttttt < 1:2168868/99‑1 (MQ=255) gTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactt < 2:729072‑M1/99‑37 (MQ=255) tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAAACTGTCCATATCATAAATAAGTTACGTATTTTTtc > 1:1421903/1‑99 (MQ=255) ttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttt < 1:272108‑M1/99‑39 (MQ=255) gATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttc > 1:1584662‑M1/1‑59 (MQ=255) gATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAA‑TGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttca < 2:1043180‑M1/99‑42 (MQ=255) aTTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAg > 2:1741499/1‑99 (MQ=255) agtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCa > 2:672400‑M1/48‑99 (MQ=255) ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatt > 2:1231803‑M1/1‑51 (MQ=255) ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatt < 2:1659175‑M1/99‑49 (MQ=255) ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatt < 1:1754586‑M1/99‑49 (MQ=255) gactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaaa > 1:1966986‑M1/43‑99 (MQ=255) actgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaaaa < 2:82665‑M1/58‑1 (MQ=255) ttGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgt < 2:880055‑M1/99‑52 (MQ=255) tGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgtt > 2:2236554‑M1/1‑47 (MQ=255) tGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgtt < 1:2072211‑M1/99‑53 (MQ=255) gATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttg > 2:1115366‑M1/1‑46 (MQ=255) ccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATAtt < 2:1507735‑M1/62‑1 (MQ=255) taataaAGTTAAAAAAACAAATAAATACAAGACAA‑TGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggct < 2:278688‑M1/99‑57 (MQ=255) aacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaa < 1:129874‑M1/64‑1 (MQ=255) actgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaaaa > 1:1027398‑M1/33‑99 (MQ=255) ctgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa > 2:1423810‑M1/32‑99 (MQ=255) gcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg > 2:376924‑M1/30‑99 (MQ=255) gTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa > 1:1854212/1‑99 (MQ=255) cacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa < 1:941432‑M1/71‑1 (MQ=255) cagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACa > 1:1084681‑M1/27‑99 (MQ=255) ttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTGCTCAAGCATAAAAATATTAAAAAACGACaaaa < 1:2115049‑M1/76‑1 (MQ=255) aaaaCAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctatt > 1:2331280‑M1/1‑31 (MQ=255) aaaaCAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaaaa > 2:28861/1‑99 (MQ=255) ttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAg > 1:280829‑M1/22‑99 (MQ=255) aaCAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgt > 2:59172‑M1/1‑29 (MQ=255) aaCAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGc > 2:962950/1‑99 (MQ=255) aataaataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatc > 1:1263008‑M1/1‑25 (MQ=255) aataaataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatc > 1:986126‑M1/1‑25 (MQ=255) caaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTa > 2:2283332‑M1/16‑99 (MQ=255) caaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTa > 1:2252699‑M1/16‑99 (MQ=255) ataaataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatct < 2:1844020‑M1/99‑76 (MQ=255) taaataCAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTaa > 1:1066999/1‑99 (MQ=255) taaataCAAGACAA‑TGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAAc < 2:346984/99‑1 (MQ=255) aaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTaa < 2:152275‑M1/85‑1 (MQ=255) aaataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatcttt < 1:1241997‑M1/99‑78 (MQ=255) aaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAAc > 2:736554‑M1/14‑99 (MQ=255) aaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAAc > 1:915922‑M1/14‑99 (MQ=255) ataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttat > 2:1778058‑M1/1‑20 (MQ=255) ataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttat > 1:1522204‑M1/1‑20 (MQ=255) ataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttat > 2:1686414‑M1/1‑20 (MQ=255) agatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTg > 1:1161640‑M1/12‑99 (MQ=255) taCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatt > 1:165111‑M1/1‑19 (MQ=255) taCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatt < 1:1336924‑M1/99‑81 (MQ=255) gatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGt > 2:1571377‑M1/11‑99 (MQ=255) cAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttattta < 1:1547201‑M1/99‑83 (MQ=255) aaGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatttat > 2:238716‑M1/1‑16 (MQ=255) aaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGa > 1:1361529‑M1/7‑99 (MQ=255) aaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGa < 2:2284117‑M1/93‑1 (MQ=255) aGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatttata > 1:583251‑M1/1‑15 (MQ=255) aTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGt > 2:1289527/1‑99 (MQ=255) TTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTa > 1:2241138‑M1/1‑99 (MQ=255) TTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTa > 2:1392102‑M1/1‑99 (MQ=255) | GGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTA > NC_000913/4542584‑4542780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |