Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,899,395 IS1 (–) +9 bp 100% intergenic (‑2/+5) yieK ← / ← yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)171 (1.240) 99/174 NT 99.4% noncoding (1/768 nt) IS1 repeat region
?NC_000913 3899395 = 1 (0.010)intergenic (‑2/+13) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL
* ? NC_000913 = 3584195NA (NA)153 (1.090) 97/176 NT 99.3% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3899403 1 (0.010)intergenic (‑10/+5) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

Only 100 of 202 total aligned reads displayed.

TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979172‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  >  NC_000913/3899395‑3899492
                                                                                                                                                                                                     
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    <  1:611742/99‑1
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  2:939176/1‑99
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  2:568914/1‑99
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    <  1:2379230/99‑1
 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                   <  1:1187773/99‑1
  AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTT                                                                                                  <  1:983121/99‑1
   GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTA                                                                                                 >  2:3226955/1‑99
   GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTA                                                                                                 >  1:1247847/1‑99
    TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAA                                                                                                <  1:1321058/99‑1
    TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAA                                                                                                <  2:1451179/99‑1
    TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAA                                                                                                >  1:2733673/1‑99
    TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAA                                                                                                <  1:2630587/99‑1
       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGC                                                                                             <  2:1219374/99‑1
        TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCC                                                                                            <  1:2699656/99‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCT                                                                                           <  1:3227969/99‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCT                                                                                           <  1:553113/99‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCT                                                                                           <  1:1042997/99‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCT                                                                                           <  2:1501580/99‑1
          AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTT                                                                                          >  2:1991023/1‑99
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        >  1:631962/1‑99
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        <  2:2224101/99‑1
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        <  2:3563005/99‑1
              GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTT                                                                                      <  1:153917/99‑1
                AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTA                                                                                    >  1:728621/1‑99
                 GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTAT                                                                                   >  1:474052/1‑99
                   GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTT                                                                                 <  1:2832708/99‑1
                   GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTT                                                                                 >  1:700147/1‑99
                     CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAA                                                                               >  1:1659914/1‑99
                      AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAA                                                                              <  1:3675086/99‑1
                       GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAAT                                                                             <  2:2620918/99‑1
                         TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAA                                                                           >  2:3265048/1‑99
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATT                                                                         <  2:3110308/99‑1
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATT                                                                         <  1:206846/99‑1
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATT                                                                         <  2:2687991/99‑1
                            TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTT                                                                        <  2:2078748/99‑1
                              GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCT                                                                      <  1:2521560/99‑1
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     <  1:2682717/99‑1
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     <  1:1136464/99‑1
                                AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGT                                                                    >  1:1370871/1‑99
                                AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGT                                                                    >  1:147528/1‑99
                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTGATTTAAATAATTTCTGTACAAA                                                               <  1:1019732/99‑1
                                        CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGC                                                            <  2:2642781/99‑1
                                        CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGC                                                            <  1:2600438/99‑1
                                            TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCA                                                        <  2:764414/99‑1
                                              GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATA                                                      <  2:3309707/99‑1
                                              GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATA                                                      <  1:2635526/99‑1
                                                GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGG                                                    >  1:1183137/1‑99
                                                GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGG                                                    >  1:304557/1‑99
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGG                                                <  2:273969/99‑1
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGG                                                <  1:864421/99‑1
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGG                                                <  1:255141/99‑1
                                                     TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGT                                               >  1:1233893/1‑99
                                                          AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCA                                          >  1:1850347/1‑99
                                                          AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCA                                          <  2:1142829/99‑1
                                                           ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAG                                         >  1:604962/1‑99
                                                            CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGA                                        >  2:1924702/1‑99
                                                             ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGAC                                       >  1:2438575/1‑99
                                                             ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGAC                                       >  2:1003048/1‑99
                                                              CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACA                                      >  2:3683468/1‑99
                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACAT                                     >  2:2247671/1‑99
                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACAT                                     >  2:3032209/1‑99
                                                                 TCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCC                                   >  2:3329453/1‑99
                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCA                                  >  2:135244/1‑99
                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCA                                  <  2:3405580/99‑1
                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCA                                  <  1:1967681/99‑1
                                                                   ATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCAT                                 <  1:3379100/99‑1
                                                                   ATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCAT                                 >  1:1420156/1‑99
                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATT                                >  1:1443020/1‑99
                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATT                                >  2:1321979/1‑99
                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATT                                <  1:2135781/99‑1
                                                                     ACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTT                               <  2:969434/99‑1
                                                                      CACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTC                              >  1:3346491/1‑99
                                                                        CTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCAT                            >  2:2647213/1‑99
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGT                         <  1:2249624/99‑1
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGT                         >  2:609460/1‑99
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGT                         <  1:3200908/99‑1
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGT                         <  1:815909/99‑1
                                                                            ATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTT                        <  2:2858573/99‑1
                                                                            ATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTT                        >  1:908273/1‑99
                                                                                GTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGA                    >  2:3530284/1‑99
                                                                                GTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGA                    <  2:1713238/99‑1
                                                                                GTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGA                    <  2:1605181/99‑1
                                                                                 TAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAC                   >  1:1831862/1‑99
                                                                                 TAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAC                   >  1:2927202/1‑99
                                                                                  AAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACC                  <  1:2001584/99‑1
                                                                                   AGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCC                 <  2:810756/99‑1
                                                                                      TGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGA              <  2:2531491/99‑1
                                                                                        GCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATg            <  2:3615413/99‑2
                                                                                        GCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATA            <  2:313606/99‑1
                                                                                        GCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATA            >  1:157134/1‑99
                                                                                        GCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATA            <  1:1163067/99‑1
                                                                                         CAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAT           <  2:23712/99‑1
                                                                                         CAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAT           >  2:497043/1‑99
                                                                                          AGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATT          <  2:2052501/99‑1
                                                                                            CATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCC        <  2:3358453/99‑1
                                                                                            CATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCC        <  1:192523/99‑1
                                                                                               CACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGG     >  1:3005613/1‑99
                                                                                               CACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGG     >  1:1795425/1‑99
                                                                                                ACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGT    >  2:8714/1‑99
                                                                                                  CTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  <  1:3086190/99‑1
                                                                                                                                                                                                     
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979172‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  >  NC_000913/3899395‑3899492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.