Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,899,395 IS1 (–) +9 bp 100% intergenic (‑2/+5) yieK ← / ← yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)106 (1.260) 70/174 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 3899395 = 0 (0.000)intergenic (‑2/+13) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL
* ? NC_000913 = 3584195NA (NA)97 (1.140) 72/176 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3899403 0 (0.000)intergenic (‑10/+5) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

Only 100 of 128 total aligned reads displayed.

TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979172‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  >  NC_000913/3899395‑3899492
                                                                                                                                                                                                     
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  1:1097435/1‑99
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  2:1653851/1‑99
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  1:1280600/1‑99
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                    >  2:568647/1‑99
 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                   <  2:1341767/99‑1
 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                   >  2:836996/1‑99
 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                   <  1:1487610/99‑1
   GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTA                                                                                                 >  1:1648341/1‑99
       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGC                                                                                             <  1:1719110/99‑1
       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGC                                                                                             <  1:886357/99‑1
        TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCC                                                                                            >  2:1227422/1‑99
        TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCC                                                                                            <  2:2231264/99‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCT                                                                                           <  2:1286752/99‑1
           ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAGTCAGTAAGTTGGCAGCATCACCTTAATGCCTTA                                                                                         <  1:340824/99‑1
           ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTA                                                                                         <  1:2080985/99‑1
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        >  1:1637418/1‑99
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        <  2:175642/99‑1
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        >  2:67930/1‑99
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTAT                                                                                        >  1:468373/1‑99
              GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTT                                                                                      >  2:426372/1‑99
              GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTT                                                                                      <  1:497045/99‑1
              GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTT                                                                                      <  2:2163311/99‑1
                 GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTAT                                                                                   >  1:243502/1‑99
                      AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAA                                                                              <  2:1129211/99‑1
                      AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAA                                                                              <  1:1505609/99‑1
                       GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAAT                                                                             >  2:804162/1‑99
                       GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAAT                                                                             <  1:669821/99‑1
                          GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAAT                                                                          <  2:426009/99‑1
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATT                                                                         >  1:686624/1‑99
                            TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTT                                                                        <  2:1192266/99‑1
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     <  1:2013/99‑1
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     <  1:160133/99‑1
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     >  1:1445326/1‑99
                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTG                                                                     <  2:110844/99‑1
                                 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCACCTTAGTGCCTTATTTTAGTTAAGTAATTTCTGga                                                                   >  2:1916133/1‑97
                                   AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACA                                                                 <  2:2100490/99‑1
                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAA                                                               <  2:1046823/99‑1
                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAA                                                               <  2:1940736/99‑1
                                      AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAG                                                              >  1:314166/1‑99
                                      AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAG                                                              >  1:525644/1‑99
                                       GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGG                                                             <  2:1222463/99‑1
                                        CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGC                                                            >  2:1689256/1‑99
                                           CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGC                                                         >  2:924188/1‑99
                                            TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCA                                                        >  2:363565/1‑99
                                              GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATA                                                      >  1:1324752/1‑99
                                               AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAG                                                     >  2:1900196/1‑99
                                                  ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCT                                                  <  1:1220909/99‑1
                                                    CTCAAAAACACCATCATACATTAAAGCAGTAAGTTGGCAGCATCTCCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGG                                                <  2:121413/99‑1
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGG                                                >  1:1942051/1‑99
                                                     TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGT                                               <  2:1319169/99‑1
                                                     TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGT                                               <  2:836900/99‑1
                                                        AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGC                                            >  1:1074212/1‑99
                                                          AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCA                                          <  1:2140249/99‑1
                                                            CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGA                                        >  2:1369497/1‑99
                                                             ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGAC                                       >  1:1950304/1‑99
                                                              CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTTCATAGGCTGGTCGCCAGACA                                      >  2:1508516/1‑99
                                                              CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACA                                      <  1:698980/99‑1
                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACAT                                     <  1:234078/99‑1
                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACAT                                     <  1:1574735/99‑1
                                                                 TCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCC                                   >  2:1957003/1‑99
                                                                 TCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCC                                   >  1:912887/1‑99
                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCA                                  <  2:2015802/99‑1
                                                                   ATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCAT                                 <  1:39405/99‑1
                                                                   ATACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCAT                                 >  2:1642731/1‑99
                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATT                                >  2:2030321/1‑99
                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATT                                >  2:427252/1‑99
                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCA                             <  2:1428829/99‑1
                                                                        CTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCAT                            >  1:672711/1‑99
                                                                        CTAAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCAT                            >  1:1972705/1‑99
                                                                          AAATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGG                          <  1:1855200/99‑1
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGT                         <  1:2156853/99‑1
                                                                           AATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGCTCGCCAGACATCCATTTCATGGT                         >  2:741748/1‑99
                                                                            ATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTT                        <  2:1261935/99‑1
                                                                            ATCAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTT                        <  1:2252950/99‑1
                                                                              CAGTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCA                      <  2:1778516/99‑1
                                                                                GTAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGA                    >  1:1647509/1‑99
                                                                                 TAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAC                   >  2:1960049/1‑99
                                                                                 TAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAC                   <  1:928223/99‑1
                                                                                 TAAGTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAC                   >  1:582687/1‑99
                                                                                    GTTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCG                >  2:530060/1‑99
                                                                                     TTGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGG               >  2:746597/1‑99
                                                                                      TGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGA              <  1:1870094/99‑1
                                                                                      TGGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGA              <  1:582550/99‑1
                                                                                       GGCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGAT             <  1:1020878/99‑1
                                                                                        GCAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATA            >  1:266559/1‑99
                                                                                         CAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAT           >  1:2244476/1‑99
                                                                                         CAGCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAT           <  2:1559673/99‑1
                                                                                           GCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTC         >  2:1534852/1‑99
                                                                                           GCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTC         >  1:1773163/1‑99
                                                                                           GCATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTC         >  2:552321/1‑99
                                                                                            CATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCC        <  2:2144355/99‑1
                                                                                            CATCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCC        <  2:1042318/99‑1
                                                                                              TCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTG      >  2:1680364/1‑99
                                                                                              TCACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTG      >  1:1090266/1‑99
                                                                                               CACCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGG     <  2:1278508/99‑1
                                                                                                 CCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTA   >  1:1507719/1‑99
                                                                                                 CCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCATGGTA   >  1:1192639/1‑99
                                                                                                  CTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  <  1:1398554/99‑1
                                                                                                  CTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  <  1:391758/99‑1
                                                                                                  CTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  <  2:2075294/99‑1
                                                                                                                                                                                                     
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979172‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAA  >  NC_000913/3899395‑3899492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.