Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp 100% [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 90 [0] [0] 92 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)78 (1.030) 58/174 NT 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235
                                                                                                  |                                                                                                  
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    <  2:413543‑M2/1‑1 (MQ=255)
   ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACtt                                                                                                 <  2:890258‑M2/4‑1 (MQ=255)
    tcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTc                                                                                                <  2:918606‑M2/5‑1 (MQ=255)
       gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  1:1173277‑M2/92‑99 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:1721844‑M2/10‑1 (MQ=255)
          cagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAcc                                                                                          >  2:754028‑M2/89‑99 (MQ=255)
           agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         >  2:599835‑M2/88‑99 (MQ=255)
            gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        >  2:1274675‑M2/87‑99 (MQ=255)
            gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        >  2:583497‑M2/87‑99 (MQ=255)
                 cggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTg                                                                                   >  2:286805‑M2/82‑99 (MQ=255)
                 cggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTg                                                                                   >  1:1714845‑M2/82‑99 (MQ=255)
                   gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  2:171477‑M2/80‑99 (MQ=255)
                    tgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATg                                                                                <  2:1791109‑M2/21‑1 (MQ=255)
                     gaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                               <  1:786838‑M2/22‑1 (MQ=255)
                         tgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCttt                                                                           >  2:176473‑M2/74‑99 (MQ=255)
                            catggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaa                                                                        >  1:851495‑M2/71‑99 (MQ=255)
                              tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      <  2:1073551‑M2/31‑1 (MQ=255)
                                 tattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGa                                                                   >  2:200739‑M2/66‑99 (MQ=255)
                                  attgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGaa                                                                  >  1:393866‑M2/65‑99 (MQ=255)
                                   ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  2:1425904‑M2/64‑99 (MQ=255)
                                    tgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACa                                                                <  2:1172054‑M2/37‑1 (MQ=255)
                                     gttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAg                                                               <  1:1335222‑M2/38‑1 (MQ=255)
                                      ttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAgg                                                              >  1:1060476‑M2/61‑99 (MQ=255)
                                         cgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTg                                                           >  2:1323403‑M2/58‑99 (MQ=255)
                                         cgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTg                                                           >  1:1707718‑M2/58‑99 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          >  2:1695403‑M2/57‑99 (MQ=255)
                                           tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGt                                                         >  1:1784780‑M2/56‑99 (MQ=255)
                                               ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  2:1881143‑M2/52‑99 (MQ=255)
                                               ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  2:1318087‑M2/52‑99 (MQ=255)
                                               ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  1:470357‑M2/52‑99 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   <  2:1575806‑M2/50‑1 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  1:1262411‑M2/50‑99 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  2:1588597‑M2/50‑99 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  1:28251‑M2/50‑99 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  2:1582541‑M2/50‑99 (MQ=255)
                                                  aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcac                                                  <  1:2103321‑M2/51‑1 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 <  1:831076‑M2/52‑1 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  1:580332‑M2/48‑99 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  2:2092855‑M2/48‑99 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               >  2:2048361‑M2/46‑99 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:2168116‑M2/54‑1 (MQ=255)
                                                      agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              >  1:1958993‑M2/45‑99 (MQ=255)
                                                      agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              >  1:1982443‑M2/45‑99 (MQ=255)
                                                        aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            >  1:277602‑M2/43‑99 (MQ=255)
                                                         aatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCg                                           >  1:959814‑M2/42‑99 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  2:1099962‑M2/40‑99 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         <  2:1908963‑M2/60‑1 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  1:1821948‑M2/40‑99 (MQ=255)
                                                            ttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACg                                        >  2:344319‑M2/39‑99 (MQ=255)
                                                             tgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACgg                                       <  2:29988‑M2/62‑1 (MQ=255)
                                                               tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCGTTTGAAATCGAACAGATTAGTATCGCACAGATGCGACGGca                                     >  2:410000‑M2/36‑99 (MQ=255)
                                                                ctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcac                                    <  2:1269006‑M2/65‑1 (MQ=255)
                                                                 tgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacc                                   >  2:2044008‑M2/34‑99 (MQ=255)
                                                                  gcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacca                                  <  1:1688009‑M2/67‑1 (MQ=255)
                                                                  gcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacca                                  <  1:1233123‑M2/67‑1 (MQ=255)
                                                                     caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               >  2:708379‑M2/30‑99 (MQ=255)
                                                                     caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               >  2:2076701‑M2/30‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  1:973731‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  1:354277‑M2/72‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  1:2014945‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  1:1602414‑M2/72‑1 (MQ=255)
                                                                          attacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGc                          >  2:185016‑M2/25‑99 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:1338441‑M2/77‑1 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:426735‑M2/77‑1 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        >  2:661597‑M2/23‑99 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  1:1671139‑M2/77‑1 (MQ=255)
                                                                             acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       <  2:1476444‑M2/78‑1 (MQ=255)
                                                                                tcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                    >  1:1017543‑M2/19‑99 (MQ=255)
                                                                                 catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   <  2:1354035‑M2/82‑1 (MQ=255)
                                                                                  atgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCt                  <  2:743467‑M2/83‑1 (MQ=255)
                                                                                  atgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCt                  >  2:606001‑M2/17‑99 (MQ=255)
                                                                                   tgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 >  1:10149‑M2/16‑99 (MQ=255)
                                                                                   tgattatggcgaaacACTTCAGAACCCTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 <  2:956130‑M2/84‑1 (MQ=255)
                                                                                      ttatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAc              >  2:884471‑M2/13‑99 (MQ=255)
                                                                                         tggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATc           >  2:2072868‑M2/10‑99 (MQ=255)
                                                                                         tggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATc           >  1:1584253‑M2/10‑99 (MQ=255)
                                                                                         tggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATc           >  1:311087‑M2/10‑99 (MQ=255)
                                                                                          ggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCg          <  2:796150‑M2/91‑1 (MQ=255)
                                                                                           gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         <  1:317870‑M2/92‑1 (MQ=255)
                                                                                           gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         <  1:96390‑M2/92‑1 (MQ=255)
                                                                                           gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         >  1:1751393‑M2/8‑99 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  1:1673593‑M2/93‑1 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  2:1269459‑M2/93‑1 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      <  1:1854088‑M2/95‑1 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:1195156‑M2/5‑99 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:794915‑M2/5‑99 (MQ=255)
                                                                                               aacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCg     >  1:2071882‑M2/4‑99 (MQ=255)
                                                                                               aacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCg     >  2:1836666‑M2/4‑99 (MQ=255)
                                                                                                acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  2:1140439‑M2/97‑1 (MQ=255)
                                                                                                 cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGAt   >  2:1927219‑M2/2‑99 (MQ=255)
                                                                                                  aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  <  1:920476/99‑1 (MQ=255)
                                                                                                  aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  >  2:2029974/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: