New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 71275122 (1.190)4291 (44.020)
+GCTC
157/168 NT 97.6% intergenic (+10/‑76) araC/yabI DNA‑binding transcriptional dual regulator AraC/DedA family protein YabI
?NC_000913 366286 = 98 (0.960)coding (20/3075 nt) lacZ beta‑galactosidase

Only 100 of 5608 total aligned reads displayed.

ATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/71178‑71275
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTG  >  NC_000913/366286‑366384
                                                                                                  ||||                                                                                                   
ATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAG                                                                                                        <  1:802749/99‑1
 TTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGC                                                                                                       >  2:520599/1‑99
 TTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGC                                                                                                       >  1:1189235/1‑99
 TTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGC                                                                                                       >  2:296012/1‑99
 TTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGC                                                                                                       >  2:2267212/1‑99
      AAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAA                                                                                                  <  2:1604921/99‑1
      AAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAA                                                                                                  >  2:1088478/1‑99
      AAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAA                                                                                                  <  2:2736243/99‑1
       AAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAAT                                                                                                 >  2:2592689/1‑99
              CCGGGGCCAGCCCGAGCGCGTTCCGTGCCGTTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAAT                                                                                          <  2:1403781/99‑1
              CCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAAT                                                                                          <  1:1509988/99‑1
              CCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAAT                                                                                          <  2:2101223/99‑1
                GGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCA                                                                                        <  1:1566369/99‑1
                GGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCA                                                                                        <  2:2539523/99‑1
                GGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCA                                                                                        <  2:1139785/99‑1
                GGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCA                                                                                        <  1:200292/99‑1
                 GGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCAT                                                                                       >  1:1851564/1‑99
                     CAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGtca                                                                                   <  1:2559467/99‑4
                     CAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGtca                                                                                   <  2:1035770/99‑4
                     CAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGtca                                                                                   <  2:460201/99‑4
                     CAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGtca                                                                                   <  1:1051152/99‑4
                     CAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGtca                                                                                   <  1:123790/99‑4
                        CCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAG                                                                               <  1:2453693/99‑1
                        CCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAG                                                                               <  2:807915/99‑1
                         CCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGC                                                                              <  2:40995/99‑1
                         CCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGC                                                                              <  2:1866438/99‑1
                           GAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTG                                                                            >  1:913422/1‑99
                           GAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTG                                                                            <  1:85679/99‑1
                             GCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTT                                                                          <  2:351385/99‑1
                               GAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTC                                                                        >  2:1506914/1‑99
                                AGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCC                                                                       <  1:1666059/99‑1
                                 GTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCT                                                                      >  1:114784/1‑99
                                  ttcCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTG                                                                     >  2:903876/4‑99
                                  ttcCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTG                                                                     >  2:714269/4‑99
                                  ttcCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTG                                                                     <  1:2760724/96‑1
                                  ttcCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTG                                                                     >  1:573941/4‑99
                                           GGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATT                                                            >  2:612104/1‑99
                                            GTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTG                                                           >  2:2221343/1‑99
                                            GTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTG                                                           >  1:721801/1‑99
                                             TTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGT                                                          >  1:1288892/1‑99
                                              TGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTT                                                         <  2:2423024/99‑1
                                              TGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTT                                                         <  1:1712110/99‑1
                                                TGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTAT                                                       <  1:1618377/99‑1
                                                 GAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATC                                                      <  1:1769819/99‑1
                                                  AAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC                                                     <  1:326365/99‑1
                                                  AAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC                                                     >  1:758788/1‑99
                                                  AAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC                                                     <  1:2352373/99‑1
                                                      AAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTC                                                 >  2:165481/1‑99
                                                       AAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTA                                                        >  2:760350/1‑91
                                                        AAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCAC                                               >  2:1355978/1‑99
                                                          GTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAA                                             <  1:2656180/99‑1
                                                          GTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAA                                             <  2:2059805/99‑1
                                                           TGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAAT                                            >  1:1810872/1‑99
                                                            GAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATT                                           <  2:1909738/99‑1
                                                             AATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTC                                          <  1:2396181/99‑1
                                                              ATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCC                                         >  1:1440447/1‑99
                                                               TGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCA                                        >  2:1962485/1‑99
                                                               TGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCA                                        >  1:627921/1‑99
                                                                GATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCAC                                       <  1:372995/99‑1
                                                                 ATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA                                      <  2:200341/99‑1
                                                                 ATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA                                      <  2:2784056/99‑1
                                                                 ATGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA                                      >  2:564120/1‑99
                                                                  TGTAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACAC                                     >  1:976595/1‑99
                                                                    TAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAA                                   <  2:2636640/99‑1
                                                                    TAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAA                                   <  1:2511173/99‑1
                                                                    TAGCCGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAA                                   >  2:1242788/1‑99
                                                                        CGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATA                               <  1:1956539/99‑1
                                                                        CGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATA                               <  1:1095011/99‑1
                                                                        CGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATA                               <  2:1190523/99‑1
                                                                        CGTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATA                               <  1:1343293/99‑1
                                                                         GTCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAC                              >  2:2326753/1‑99
                                                                          TCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACG                             >  1:2706872/1‑99
                                                                          TCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACG                             >  1:478964/1‑99
                                                                          TCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACG                             >  1:2251403/1‑99
                                                                          TCAAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCCCACAATTCCACACAACATACG                             >  2:1810783/1‑99
                                                                            AAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAG                           <  2:2160494/99‑1
                                                                            AAGTTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAG                           >  1:2607359/1‑99
                                                                               TTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCG                        >  2:860944/1‑99
                                                                               TTGTCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCG                        >  1:2093723/1‑99
                                                                                  TCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAA                     <  1:2300253/99‑1
                                                                                  TCATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAA                     >  2:2375879/1‑99
                                                                                   CATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAG                    >  1:1000958/1‑99
                                                                                    ATAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGC                   >  1:423464/1‑99
                                                                                     TAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCA                  >  2:662464/1‑99
                                                                                     TAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCA                  <  1:2143503/99‑1
                                                                                     TAATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCA                  <  2:1758101/99‑1
                                                                                       ATTGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATA                >  2:1548121/1‑99
                                                                                         TGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAA              <  1:1387777/99‑1
                                                                                         TGGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAA              <  2:1302892/99‑1
                                                                                          GGTACCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAG             <  1:2199836/99‑1
                                                                                            tacCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTG           >  1:1905181/4‑99
                                                                                            tacCGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTG           >  2:1702244/4‑99
                                                                                             acctAGCTCGAATTCGTGATCATGTCATAGCTGTTTCCTGTGCGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGT          >  2:1455443/5‑99
                                                                                               CGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAA        <  1:2045389/99‑1
                                                                                               CGAGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAA        >  2:2688730/1‑99
                                                                                                 AGCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAG      >  1:531130/1‑99
                                                                                                  GCTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGC     <  1:677858/99‑1
                                                                                                   CTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCC    >  1:2813225/1‑99
                                                                                                   CTCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCC    <  2:2481177/99‑1
                                                                                                    TCGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCtt   >  2:954399/1‑97
                                                                                                  ||||                                                                                                   
ATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/71178‑71275
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTG  >  NC_000913/366286‑366384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.