Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp 100% [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 109 [0] [0] 111 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)97 (1.020) 66/174 NT 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 111 total aligned reads displayed.

TAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411040‑1411235
                                                                                                 |                                                                                                  
ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   <  2:294149‑M2/2‑1 (MQ=255)
 tttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACt                                                                                                  <  2:2371138‑M2/3‑1 (MQ=255)
    cagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCa                                                                                               <  1:2251638‑M2/6‑1 (MQ=255)
      gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             <  2:1015833‑M2/8‑1 (MQ=255)
      gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  2:2146455‑M2/92‑99 (MQ=255)
      gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatagcgaaacACTTCAGa                                                                                             <  1:1073722‑M2/8‑1 (MQ=255)
       agcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGaa                                                                                            <  1:961826‑M2/9‑1 (MQ=255)
        gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:2434284‑M2/10‑1 (MQ=255)
        gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:399508‑M2/10‑1 (MQ=255)
          agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         >  1:2610069‑M2/88‑99 (MQ=255)
          agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         >  1:2225051‑M2/88‑99 (MQ=255)
           gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        >  2:1960037‑M2/87‑99 (MQ=255)
           gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        <  1:1784182‑M2/13‑1 (MQ=255)
           gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        >  2:2390577‑M2/87‑99 (MQ=255)
            acaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTg                                                                                       <  1:2300022‑M2/14‑1 (MQ=255)
             caacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                      <  1:1845975‑M2/15‑1 (MQ=255)
               acggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGt                                                                                    <  2:2519600‑M2/17‑1 (MQ=255)
                  gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  1:1087914‑M2/80‑99 (MQ=255)
                     aaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGcc                                                                              <  1:173896‑M2/23‑1 (MQ=255)
                      aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             >  1:1447600‑M2/76‑99 (MQ=255)
                       atgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCtt                                                                            >  1:59794‑M2/75‑99 (MQ=255)
                       atgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCtt                                                                            <  2:2222750‑M2/25‑1 (MQ=255)
                       atgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCtt                                                                            <  2:179929‑M2/25‑1 (MQ=255)
                       atgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCtt                                                                            >  2:339170‑M2/75‑99 (MQ=255)
                            atggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacattatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                       <  1:2081507‑M2/30‑1 (MQ=255)
                            atggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                       <  1:2361351‑M2/30‑1 (MQ=255)
                             tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  1:2382415‑M2/69‑99 (MQ=255)
                             tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  2:1443331‑M2/69‑99 (MQ=255)
                             tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      <  2:1087904‑M2/31‑1 (MQ=255)
                               gtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCg                                                                    <  1:2337348‑M2/33‑1 (MQ=255)
                                tattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGa                                                                   >  1:654716‑M2/66‑99 (MQ=255)
                                tattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGa                                                                   >  2:1359296‑M2/66‑99 (MQ=255)
                                  ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  1:994999‑M2/64‑99 (MQ=255)
                                   tgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACa                                                                <  2:2374628‑M2/37‑1 (MQ=255)
                                      tacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                             >  1:2389413‑M2/60‑99 (MQ=255)
                                      tacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                             <  1:1106886‑M2/40‑1 (MQ=255)
                                       acgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGtt                                                            <  1:209219‑M2/41‑1 (MQ=255)
                                        cgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTg                                                           >  1:82371‑M2/58‑99 (MQ=255)
                                          tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGt                                                         <  2:1307674‑M2/44‑1 (MQ=255)
                                           ttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTa                                                        <  2:2498898‑M2/45‑1 (MQ=255)
                                            taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  1:738566‑M2/46‑1 (MQ=255)
                                                taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   <  2:166993‑M2/50‑1 (MQ=255)
                                                taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   <  2:721121‑M2/50‑1 (MQ=255)
                                                taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  2:1583457‑M2/50‑99 (MQ=255)
                                                taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   <  2:670511‑M2/50‑1 (MQ=255)
                                                  acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  2:158558‑M2/48‑99 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  1:2773775‑M2/54‑1 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:1571496‑M2/54‑1 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  1:2456896‑M2/54‑1 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:109748‑M2/54‑1 (MQ=255)
                                                     agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              >  2:949560‑M2/45‑99 (MQ=255)
                                                      gaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATg                                             <  1:2748017‑M2/56‑1 (MQ=255)
                                                       aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            >  2:1828989‑M2/43‑99 (MQ=255)
                                                       aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            >  2:2809752‑M2/43‑99 (MQ=255)
                                                         atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  2:405548‑M2/59‑1 (MQ=255)
                                                         atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  1:1086771‑M2/59‑1 (MQ=255)
                                                          tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  2:671852‑M2/40‑99 (MQ=255)
                                                               ctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcac                                    <  1:1189400‑M2/65‑1 (MQ=255)
                                                                 gcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacca                                  >  1:2087100‑M2/33‑99 (MQ=255)
                                                                  cacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcaccac                                 >  2:1560425‑M2/32‑99 (MQ=255)
                                                                   acaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACcaca                                <  2:197668‑M2/69‑1 (MQ=255)
                                                                   acaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACcaca                                >  1:477702‑M2/31‑99 (MQ=255)
                                                                     aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                              <  1:336732‑M2/71‑1 (MQ=255)
                                                                     aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                              >  1:1122312‑M2/29‑99 (MQ=255)
                                                                        gattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTg                           <  2:711206‑M2/74‑1 (MQ=255)
                                                                           tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  1:92084‑M2/77‑1 (MQ=255)
                                                                           tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:2788246‑M2/77‑1 (MQ=255)
                                                                           tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:2815039‑M2/77‑1 (MQ=255)
                                                                            acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       <  2:871166‑M2/78‑1 (MQ=255)
                                                                            acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       <  1:2785514‑M2/78‑1 (MQ=255)
                                                                            acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       <  2:1049633‑M2/78‑1 (MQ=255)
                                                                               tcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                    >  1:1358394‑M2/19‑99 (MQ=255)
                                                                                catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   <  1:2581070‑M2/82‑1 (MQ=255)
                                                                                catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   <  1:250531‑M2/82‑1 (MQ=255)
                                                                                catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   <  1:915634‑M2/82‑1 (MQ=255)
                                                                                 atgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCt                  >  1:2539994‑M2/17‑99 (MQ=255)
                                                                                  tgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 >  1:2005194‑M2/16‑99 (MQ=255)
                                                                                  tgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 <  2:1330082‑M2/84‑1 (MQ=255)
                                                                                  tgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 >  2:803879‑M2/16‑99 (MQ=255)
                                                                                    attatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCTCCACATTCTGCATCGCGATGaa               >  2:939873‑M2/14‑99 (MQ=255)
                                                                                    attatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGaa               <  2:1086774‑M2/86‑1 (MQ=255)
                                                                                     ttatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAc              >  1:97894‑M2/13‑99 (MQ=255)
                                                                                     ttatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAc              <  1:1745247‑M2/87‑1 (MQ=255)
                                                                                      tatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACa             <  2:1823451‑M2/88‑1 (MQ=255)
                                                                                       atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  1:2617121‑M2/89‑1 (MQ=255)
                                                                                       atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  1:83201‑M2/89‑1 (MQ=255)
                                                                                       atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  2:685978‑M2/89‑1 (MQ=255)
                                                                                         ggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCg          <  1:1127896‑M2/91‑1 (MQ=255)
                                                                                          gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         <  1:1718192‑M2/92‑1 (MQ=255)
                                                                                            gaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       <  1:295608‑M2/94‑1 (MQ=255)
                                                                                            gaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       <  2:1616526‑M2/94‑1 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:123378‑M2/5‑99 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:2243732‑M2/5‑99 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      <  2:1746708‑M2/95‑1 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      <  2:1079139‑M2/95‑1 (MQ=255)
                                                                                               acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  2:2772111‑M2/97‑1 (MQ=255)
                                                                                               acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  2:2262005‑M2/97‑1 (MQ=255)
                                                                                                cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGAt   >  2:460861‑M2/2‑99 (MQ=255)
                                                                                                 aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  <  2:1660584/99‑1 (MQ=255)
                                                                                                 aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  <  1:1095042/99‑1 (MQ=255)
                                                                                                 |                                                                                                  
TAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411040‑1411235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.