Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,502,695 C→A 14.9% P119Q (CCA→CAA)  frlC → fructoselysine 3‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,502,6950CA14.9% 284.3 / 39.6 107P119Q (CCA→CAA) frlCfructoselysine 3‑epimerase
Reads supporting (aligned to +/- strand):  ref base C (43/48);  new base A (10/6);  total (53/54)
Fisher's exact test for biased strand distribution p-value = 2.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 109 total aligned reads displayed.

CGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCGTTAA  >  NC_000913/3502597‑3502790
                                                                                                  |                                                                                               
cgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGcc                                                                                                 >  1:684543/1‑99 (MQ=255)
  aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCAc                                                                                               >  1:1311299/1‑99 (MQ=255)
  aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAAc                                                                                               <  1:1595512/99‑1 (MQ=255)
   aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCAcc                                                                                              >  1:1619765/1‑99 (MQ=255)
   aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCAcc                                                                                              >  1:4101/1‑99 (MQ=255)
   aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAAcc                                                                                              >  1:1535865/1‑99 (MQ=255)
    aGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCt                                                                                             >  2:1261696/1‑99 (MQ=255)
     gCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTa                                                                                            >  1:946328/1‑99 (MQ=255)
     gCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTa                                                                                            >  2:753652/1‑99 (MQ=255)
        tCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATg                                                                                         <  1:1258356/99‑1 (MQ=255)
        tCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATg                                                                                         >  2:2441951/1‑99 (MQ=255)
           aCATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTa                                                                                      <  1:315324/99‑1 (MQ=255)
           aCATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTa                                                                                      <  1:1459704/99‑1 (MQ=255)
            cATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAt                                                                                     <  2:2813913/99‑1 (MQ=255)
             aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATc                                                                                    <  1:2430813/99‑1 (MQ=255)
                aTCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTgg                                                                                 <  1:1524271/99‑1 (MQ=255)
                 tCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTggg                                                                                >  2:325828/1‑99 (MQ=255)
                   aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGa                                                                              <  2:1265356/99‑1 (MQ=255)
                   aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGa                                                                              <  1:375857/99‑1 (MQ=255)
                   aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGa                                                                              >  1:1356245/1‑99 (MQ=255)
                   aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGa                                                                              <  2:522589/99‑1 (MQ=255)
                    aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGAc                                                                             >  2:657050/1‑99 (MQ=255)
                     gCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACg                                                                            >  2:1520393/1‑99 (MQ=255)
                       tGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGc                                                                          <  2:1420160/99‑1 (MQ=255)
                        ggCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCt                                                                         >  1:2188825/1‑99 (MQ=255)
                         gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTg                                                                        >  2:2642507/1‑99 (MQ=255)
                         gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTg                                                                        <  2:2639921/99‑1 (MQ=255)
                         gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTg                                                                        >  1:1058098/1‑99 (MQ=255)
                            aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                                                     >  2:1153693/1‑99 (MQ=255)
                            aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                                                     >  1:2127814/1‑99 (MQ=255)
                            aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                                                     <  1:2169267/99‑1 (MQ=255)
                              ggATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCaga                                                                   <  1:394374/99‑1 (MQ=255)
                              ggATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCaga                                                                   <  1:739658/99‑1 (MQ=255)
                               gATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCagag                                                                  >  1:1043260/1‑99 (MQ=255)
                                atatGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAgaga                                                                 >  1:1980175/1‑99 (MQ=255)
                                 tatGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGaa                                                                >  2:818241/1‑99 (MQ=255)
                                  atGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAc                                                               <  1:475131/99‑1 (MQ=255)
                                   tGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAcc                                                              <  2:1508300/99‑1 (MQ=255)
                                   tGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAcc                                                              >  1:930405/1‑99 (MQ=255)
                                    ggCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCt                                                             <  1:1586477/99‑1 (MQ=255)
                                      cAAAAGAGTTTAACGCGGGCTATACGCTGATTTCCGCGGCCCACGCGGCCTATCTCACGCCACCTAATCCTGTCAGAGGACGGCTGGAAGAGAACCTaa                                                           >  2:198884/1‑99 (MQ=255)
                                      cAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTaa                                                           >  2:35860/1‑99 (MQ=255)
                                       aaaaGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                                                          <  1:385502/99‑1 (MQ=255)
                                       aaaaGAGATGAACGCGGGATATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                                                          <  2:423393/99‑1 (MQ=255)
                                        aaaGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGc                                                         >  2:91558/1‑99 (MQ=255)
                                        aaaGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGc                                                         >  2:2247905/1‑99 (MQ=255)
                                           gagaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                                                      >  2:2087480/1‑99 (MQ=255)
                                           gagaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                                                      <  1:1766187/99‑1 (MQ=255)
                                           gagaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                                                      >  1:1935952/1‑99 (MQ=255)
                                           gagaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                                                      <  1:2640342/99‑1 (MQ=255)
                                            agaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAAc                                                     >  1:1613357/1‑99 (MQ=255)
                                             gaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACt                                                    >  1:1475028/1‑99 (MQ=255)
                                             gaTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACt                                                    >  2:281428/1‑99 (MQ=255)
                                              aTGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtg                                                   <  2:1078047/99‑1 (MQ=255)
                                               tGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgt                                                  >  1:471729/1‑99 (MQ=255)
                                                gAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtg                                                 <  1:762048/99‑1 (MQ=255)
                                                 aaCGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgt                                                >  2:911450/1‑99 (MQ=255)
                                                 aaCGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgt                                                >  1:954554/1‑99 (MQ=255)
                                                   cgcgGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGa                                              >  2:2105955/1‑99 (MQ=255)
                                                   cgcgGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGa                                              <  1:1612811/99‑1 (MQ=255)
                                                    gcgGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg                                             <  2:2719428/99‑1 (MQ=255)
                                                    gcgGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg                                             <  2:1645796/99‑1 (MQ=255)
                                                      gggTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa                                           <  1:279465/99‑1 (MQ=255)
                                                       ggTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAc                                          <  1:1611253/99‑1 (MQ=255)
                                                         ttATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc                                        >  1:1962342/1‑99 (MQ=255)
                                                         ttATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc                                        >  1:1590069/1‑99 (MQ=255)
                                                         ttATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc                                        >  1:2569290/1‑99 (MQ=255)
                                                         ttATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc                                        <  2:2772921/99‑1 (MQ=255)
                                                          tataCGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgcg                                       <  1:791637/99‑1 (MQ=255)
                                                           ataCGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCgg                                      >  1:2827437/1‑99 (MQ=255)
                                                           ataCGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCgg                                      >  1:1228539/1‑99 (MQ=255)
                                                            taCGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGa                                     >  2:273603/1‑99 (MQ=255)
                                                            taCGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGa                                     >  1:2391647/1‑99 (MQ=255)
                                                               gCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGaaaa                                  >  1:1542396/1‑99 (MQ=255)
                                                                cTGACTTCCGCGGCCCACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGaaatc                                 <  2:942457/99‑3 (MQ=255)
                                                                  gATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACAt                               >  1:2423520/1‑99 (MQ=255)
                                                                  gATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACAt                               <  2:1371081/99‑1 (MQ=255)
                                                                    tttCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCg                             >  1:2611302/1‑99 (MQ=255)
                                                                       ccGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCa                          <  2:2325097/99‑1 (MQ=255)
                                                                        cgcgGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCAt                         <  2:1411324/99‑1 (MQ=255)
                                                                        cgcgGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCAt                         <  2:2829603/99‑1 (MQ=255)
                                                                           ggCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGa                      <  1:885614/99‑1 (MQ=255)
                                                                            gCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGAt                     <  1:2155258/99‑1 (MQ=255)
                                                                            gCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGAt                     <  1:2830104/99‑1 (MQ=255)
                                                                             cccACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATc                    <  1:765748/99‑1 (MQ=255)
                                                                             cccACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATc                    <  1:1006257/99‑1 (MQ=255)
                                                                               cACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCtc                  >  1:96959/1‑98 (MQ=255)
                                                                               cACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTa                  <  1:913880/99‑1 (MQ=255)
                                                                               cACGCGGGCTATCTCACGCAACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTa                  >  1:2387265/1‑99 (MQ=255)
                                                                                aCGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTaa                 <  2:784417/99‑1 (MQ=255)
                                                                                aCGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTaa                 <  2:1666362/99‑1 (MQ=255)
                                                                                 cgcgGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAAt                <  1:2055601/99‑1 (MQ=255)
                                                                                  gcgGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATc               <  1:1878387/99‑1 (MQ=255)
                                                                                      gCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCg           >  1:1265506/1‑99 (MQ=255)
                                                                                       cTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGa          >  1:2282387/1‑99 (MQ=255)
                                                                                        tATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGaa         <  2:884741/99‑1 (MQ=255)
                                                                                         aTCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAAc        <  1:1236952/99‑1 (MQ=255)
                                                                                          tctcACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAAcc       >  1:1779123/1‑99 (MQ=255)
                                                                                           ctcACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCg      <  1:276590/99‑1 (MQ=255)
                                                                                               cGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCGTTaa  <  1:1462812/99‑1 (MQ=255)
                                                                                                  |                                                                                               
CGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCGTTAA  >  NC_000913/3502597‑3502790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: