Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp 100% [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 124 [0] [0] 126 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)108 (1.020) 76/174 NT 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 126 total aligned reads displayed.

TAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411040‑1411235
                                                                                                 |                                                                                                  
ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   >  2:2262663‑M2/98‑99 (MQ=255)
 tttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACt                                                                                                  <  2:2531746‑M2/3‑1 (MQ=255)
  ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACtt                                                                                                 >  2:2949588‑M2/96‑99 (MQ=255)
     agagcagacaacggtgaaatgtcatggtattgctacgtttaggtaagaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAg                                                                                              <  2:1018930‑M2/7‑1 (MQ=255)
      gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  2:2189940‑M2/92‑99 (MQ=255)
      gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  1:1270316‑M2/92‑99 (MQ=255)
       agcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGaa                                                                                            <  2:483293‑M2/9‑1 (MQ=255)
        gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:3010914‑M2/10‑1 (MQ=255)
        gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:905299‑M2/10‑1 (MQ=255)
         cagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAcc                                                                                          >  1:2012691‑M2/89‑99 (MQ=255)
          agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         <  1:2714621‑M2/12‑1 (MQ=255)
          agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         <  2:2800514‑M2/12‑1 (MQ=255)
           gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        <  2:1005298‑M2/13‑1 (MQ=255)
             caacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                      <  2:2264644‑M2/15‑1 (MQ=255)
              aacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTggg                                                                                     <  2:1953329‑M2/16‑1 (MQ=255)
                 ggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGa                                                                                  <  1:889710‑M2/19‑1 (MQ=255)
                  gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  2:2769152‑M2/80‑99 (MQ=255)
                  gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  2:1763531‑M2/80‑99 (MQ=255)
                    gaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                               >  1:1479747‑M2/78‑99 (MQ=255)
                     aaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGcc                                                                              >  2:655208‑M2/77‑99 (MQ=255)
                        tgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCttt                                                                           >  1:714369‑M2/74‑99 (MQ=255)
                        tgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCttt                                                                           >  1:1933515‑M2/74‑99 (MQ=255)
                          tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         <  2:2417268‑M2/28‑1 (MQ=255)
                          tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         >  1:2918597‑M2/72‑99 (MQ=255)
                           catggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaa                                                                        <  1:2492297‑M2/29‑1 (MQ=255)
                             tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  2:2498174‑M2/69‑99 (MQ=255)
                             tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  1:116226‑M2/69‑99 (MQ=255)
                               gtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCg                                                                    >  2:1163099‑M2/67‑99 (MQ=255)
                                  ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  1:328906‑M2/64‑99 (MQ=255)
                                      tacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                             <  1:633676‑M2/40‑1 (MQ=255)
                                        cgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTg                                                           >  1:577494‑M2/58‑99 (MQ=255)
                                         gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  1:2652707‑M2/43‑1 (MQ=255)
                                         gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  2:2280618‑M2/43‑1 (MQ=255)
                                          tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGt                                                         >  2:155917‑M2/56‑99 (MQ=255)
                                          tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGt                                                         <  2:1600677‑M2/44‑1 (MQ=255)
                                            taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  2:373311‑M2/46‑1 (MQ=255)
                                              ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  1:2995772‑M2/52‑99 (MQ=255)
                                               gtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGc                                                    >  1:2474067‑M2/51‑99 (MQ=255)
                                                taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   <  2:1407449‑M2/50‑1 (MQ=255)
                                                 aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcac                                                  >  2:353911‑M2/49‑99 (MQ=255)
                                                 aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcac                                                  >  1:865259‑M2/49‑99 (MQ=255)
                                                   caagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAg                                                >  2:1085726‑M2/47‑99 (MQ=255)
                                                   caagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAg                                                >  1:1246825‑M2/47‑99 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:233701‑M2/54‑1 (MQ=255)
                                                    aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:760580‑M2/54‑1 (MQ=255)
                                                     agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              <  1:2696909‑M2/55‑1 (MQ=255)
                                                     agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              >  1:2077083‑M2/45‑99 (MQ=255)
                                                      gaaatttgtctgcacaaggattacttcatgattatggggaaacACTTCAGAACCGTGGGTGATGCCTTTGAGTTCGAACAGGTTGGTATCGCACATATg                                             <  2:2962848‑M2/56‑1 (MQ=255)
                                                      gaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATg                                             <  1:2039373‑M2/56‑1 (MQ=255)
                                                       aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            >  1:107719‑M2/43‑99 (MQ=255)
                                                        aatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCg                                           >  1:1252168‑M2/42‑99 (MQ=255)
                                                         atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          >  1:2851282‑M2/41‑99 (MQ=255)
                                                         atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          >  1:2416780‑M2/41‑99 (MQ=255)
                                                          tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         <  2:1481826‑M2/60‑1 (MQ=255)
                                                          tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  1:1369558‑M2/40‑99 (MQ=255)
                                                           ttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACg                                        >  1:888118‑M2/39‑99 (MQ=255)
                                                           ttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACg                                        >  1:2295877‑M2/39‑99 (MQ=255)
                                                              tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGca                                     >  1:909502‑M2/36‑99 (MQ=255)
                                                               ctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcac                                    <  1:2879763‑M2/65‑1 (MQ=255)
                                                                tgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacc                                   >  2:966196‑M2/34‑99 (MQ=255)
                                                                 gcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacca                                  <  2:2913545‑M2/67‑1 (MQ=255)
                                                                  cacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcaccac                                 <  1:1120289‑M2/68‑1 (MQ=255)
                                                                   acaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACcaca                                >  1:2767947‑M2/31‑99 (MQ=255)
                                                                   acaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACcaca                                <  2:1143208‑M2/69‑1 (MQ=255)
                                                                    caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               >  1:536967‑M2/30‑99 (MQ=255)
                                                                    caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               >  2:1943965‑M2/30‑99 (MQ=255)
                                                                    caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               <  2:1306439‑M2/70‑1 (MQ=255)
                                                                     aaggattccgtcatgattatggcgaaccGCTTCAGACCCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACata                              <  2:1748285‑M2/71‑2 (MQ=255)
                                                                     aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                              <  1:719145‑M2/71‑1 (MQ=255)
                                                                      aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  2:1664066‑M2/28‑99 (MQ=255)
                                                                      aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:2769704‑M2/72‑1 (MQ=255)
                                                                      aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:840346‑M2/72‑1 (MQ=255)
                                                                      aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  1:1543992‑M2/28‑99 (MQ=255)
                                                                       ggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCt                            <  2:885919‑M2/73‑1 (MQ=255)
                                                                        gattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTg                           >  1:2279915‑M2/26‑99 (MQ=255)
                                                                        gattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTg                           >  1:146674‑M2/26‑99 (MQ=255)
                                                                          ttacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCa                         >  2:1825661‑M2/24‑99 (MQ=255)
                                                                          ttacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCa                         <  2:2504112‑M2/76‑1 (MQ=255)
                                                                           tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  1:2653857‑M2/77‑1 (MQ=255)
                                                                           tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:2592340‑M2/77‑1 (MQ=255)
                                                                            acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       >  1:2485611‑M2/22‑99 (MQ=255)
                                                                            acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       >  2:841590‑M2/22‑99 (MQ=255)
                                                                              atcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgc                     <  1:1942431‑M2/80‑1 (MQ=255)
                                                                              atcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgc                     <  1:2656894‑M2/80‑1 (MQ=255)
                                                                              atcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgc                     <  2:1664854‑M2/80‑1 (MQ=255)
                                                                               tcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                    >  2:1789124‑M2/19‑99 (MQ=255)
                                                                                      tatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACa             <  1:666416‑M2/88‑1 (MQ=255)
                                                                                      tatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACa             <  2:2114012‑M2/88‑1 (MQ=255)
                                                                                       atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  1:2723321‑M2/89‑1 (MQ=255)
                                                                                           cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        >  1:349147‑M2/7‑99 (MQ=255)
                                                                                           cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  1:2556219‑M2/93‑1 (MQ=255)
                                                                                           cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  2:1409301‑M2/93‑1 (MQ=255)
                                                                                           cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  2:2214967‑M2/93‑1 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:513590‑M2/5‑99 (MQ=255)
                                                                                             aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  1:1155948‑M2/5‑99 (MQ=255)
                                                                                              aacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCg     >  1:170339‑M2/4‑99 (MQ=255)
                                                                                               acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    >  2:2806144‑M2/3‑99 (MQ=255)
                                                                                               acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    >  2:1464279‑M2/3‑99 (MQ=255)
                                                                                                 aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  <  2:230043/99‑1 (MQ=255)
                                                                                                 aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  <  2:114831/99‑1 (MQ=255)
                                                                                                 |                                                                                                  
TAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411040‑1411235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: