| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,535,618 | A→T | 100% | L84Q (CTG→CAG) | envZ ← | sensory histidine kinase EnvZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,535,618 | 0 | A | T | 100.0% | 414.7 / NA | 105 | L84Q (CTG→CAG) | envZ | sensory histidine kinase EnvZ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (53/52); total (53/52) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 105 total aligned reads displayed.
GTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCAGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCACTTCG > NC_000913/3535523‑3535713 | gTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCt > 2:549481/1‑99 (MQ=255)gTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCt < 2:1062894/99‑1 (MQ=255)gTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCt > 2:1610035/1‑99 (MQ=255) ttGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTc > 2:2119698/1‑99 (MQ=255) tgcGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACgg < 2:632243/99‑1 (MQ=255) ccATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGa < 1:2439269/99‑1 (MQ=255) ccATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGa > 2:1373628/1‑99 (MQ=255) ccATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGa < 1:143964/99‑1 (MQ=255) ccATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGa > 1:321129/1‑99 (MQ=255) ccATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGa < 2:2819230/99‑1 (MQ=255) cATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAt < 2:2229262/99‑1 (MQ=255) cATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAt < 2:785720/99‑1 (MQ=255) tCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAtct > 2:1759948/1‑99 (MQ=255) tCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAtct > 1:2673206/1‑99 (MQ=255) tCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAtct > 1:1600468/1‑99 (MQ=255) cTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGAtctc < 1:2751971/99‑1 (MQ=255) tGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTcc < 1:239001/99‑1 (MQ=255) tGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTcc > 2:2054003/1‑99 (MQ=255) tGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTcc < 2:1370850/99‑1 (MQ=255) tGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGa < 1:1295236/99‑1 (MQ=255) cTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACgg > 1:952426/1‑99 (MQ=255) aGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAg < 1:1817163/99‑1 (MQ=255) aGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAg < 2:2586091/99‑1 (MQ=255) gAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGc > 2:743699/1‑99 (MQ=255) gAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGc < 1:2717923/99‑1 (MQ=255) gAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGc > 2:2105415/1‑99 (MQ=255) aTTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCgg > 1:1936247/1‑99 (MQ=255) aTTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCgg > 1:1140678/1‑99 (MQ=255) ttCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCggg > 1:2018519/1‑99 (MQ=255) ttCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCggg > 2:2238850/1‑99 (MQ=255) tAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGc > 2:2484492/1‑99 (MQ=255) gtgtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGcac > 2:2043281/1‑99 (MQ=255) gtgtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGcac < 1:1702743/99‑1 (MQ=255) gtgtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGcac > 1:177567/1‑99 (MQ=255) gtgtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGcac > 1:2002283/1‑99 (MQ=255) tgtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGcaca < 2:2708233/99‑1 (MQ=255) gtTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCAcaa < 1:810532/99‑1 (MQ=255) gcCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCAcaaccaac < 1:2242619/99‑1 (MQ=255) gcCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCAcaaccaac < 1:533013/99‑1 (MQ=255) ccAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTg < 1:1293766/99‑1 (MQ=255) cAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGc > 2:266989/1‑99 (MQ=255) aCGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGt < 1:1247612/99‑1 (MQ=255) cGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTg > 1:2197142/1‑99 (MQ=255) cGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTg > 2:2330357/1‑99 (MQ=255) gCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGc < 2:435177/99‑1 (MQ=255) gCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGc < 1:1343437/99‑1 (MQ=255) gCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGc < 1:2149097/99‑1 (MQ=255) cAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGcc > 1:775846/1‑99 (MQ=255) aGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCg > 2:1573687/1‑99 (MQ=255) gACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGt < 2:338429/99‑1 (MQ=255) gACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGt > 1:883973/1‑99 (MQ=255) aCCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCTACTGCGTGCCGtc < 1:2022024/99‑1 (MQ=255) ccTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcc > 1:1867547/1‑99 (MQ=255) cTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcct > 1:1254592/1‑99 (MQ=255) gCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcctcc < 2:813037/99‑1 (MQ=255) gCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcctcc > 1:1164690/1‑99 (MQ=255) gCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcctcc < 1:233230/99‑1 (MQ=255) gCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGtcctcc > 1:2727549/1‑99 (MQ=255) ccTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCa < 2:307970/99‑1 (MQ=255) tctTCGGCAGCCTCGTTGGAGTAGAGAGAGATTCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGt < 2:2628586/99‑1 (MQ=255) tctTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGt < 2:2106743/99‑1 (MQ=255) tctTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGt < 1:912591/99‑1 (MQ=255) tctTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGt > 2:2475623/1‑99 (MQ=255) ttCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTg > 1:1684732/1‑99 (MQ=255) cGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCa < 1:2712430/99‑1 (MQ=255) ggCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAg < 1:1005325/99‑1 (MQ=255) gCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGt > 1:2182416/1‑99 (MQ=255) gCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGt > 2:1029670/1‑99 (MQ=255) gCAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGt > 1:2617056/1‑99 (MQ=255) cAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGtt < 2:939089/99‑1 (MQ=255) cAGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGtt < 2:1970417/99‑1 (MQ=255) aGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGttt < 1:1231280/99‑1 (MQ=255) aGCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGttt < 2:1197403/99‑1 (MQ=255) gCCTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTg > 2:1292951/1‑99 (MQ=255) ccTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGt < 1:2062165/99‑1 (MQ=255) cTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTc > 1:1195402/1‑99 (MQ=255) cTCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTc < 1:2242308/99‑1 (MQ=255) tCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCg > 1:692987/1‑99 (MQ=255) tCGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCg < 2:664986/99‑1 (MQ=255) cGTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCgg < 1:422166/99‑1 (MQ=255) gTTGGAGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGt < 2:1685972/99‑1 (MQ=255) aGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGtcatca < 1:2718861/99‑1 (MQ=255) aGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGtcatca > 1:1493473/1‑99 (MQ=255) aGTAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGtcatca > 1:2041878/1‑99 (MQ=255) tAGAGAGAGATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAAc < 2:912407/99‑1 (MQ=255) agagagagATCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACa < 1:373012/99‑1 (MQ=255) gagagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACAt > 1:191897/1‑99 (MQ=255) gagagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACAt > 2:1218317/1‑99 (MQ=255) gagagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACAt > 2:78526/1‑99 (MQ=255) agagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATa < 1:326236/99‑1 (MQ=255) gagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATAc > 1:76623/1‑99 (MQ=255) gagagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATAc > 1:1569603/1‑99 (MQ=255) agagaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACg < 1:1139394/99‑1 (MQ=255) agaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCa < 2:1321700/99‑1 (MQ=255) agaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCa > 1:433125/1‑99 (MQ=255) gaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCAc > 2:303512/1‑99 (MQ=255) gaTCCCCTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCAc < 2:2808925/99‑1 (MQ=255) aTCGCCTGCTCACGGTAGATATCCCGACGGAATGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTGGTCGGCCAGCAACATACGCAcc > 2:52102/1‑98 (MQ=255) ccccTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCACTTc > 1:651592/1‑99 (MQ=255) cccTGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCACTTCg > 2:2435044/1‑99 (MQ=255) | GTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCCCCAGCTCACGGTAGATCTCCCGACGGAAAGCGGGAGGCACAACCAACTGCGTGCCGTCCTCCAGTTGCAGTTTGTCGGTCATCAACATACGCACTTCG > NC_000913/3535523‑3535713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |