| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,535,117 | C→T | 100% | R251H (CGT→CAT) | envZ ← | sensory histidine kinase EnvZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,535,117 | 0 | C | T | 99.2% | 597.8 / ‑4.5 | 159 | R251H (CGT→CAT) | envZ | sensory histidine kinase EnvZ |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (85/72); total (86/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 162 total aligned reads displayed.
TGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAG > NC_000913/3535021‑3535212 | cTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGt < 2:882947/99‑1 (MQ=255) cTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGt > 2:745080/1‑99 (MQ=255) aaTGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAg > 2:1729788/1‑99 (MQ=255) aaTGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAg < 2:1965188/99‑1 (MQ=255) atgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgc > 1:1005819/1‑99 (MQ=255) atgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgc > 1:1524093/1‑99 (MQ=255) tgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCTATCCTGCACGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcc > 2:911122/1‑98 (MQ=255) tgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcg > 2:1030954/1‑99 (MQ=255) tgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcg > 1:2899518/1‑99 (MQ=255) tgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcg > 1:642859/1‑99 (MQ=255) tgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcggcg > 2:2277167/1‑99 (MQ=255) tgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAgcggcg > 1:3522113/1‑99 (MQ=255) gTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTgcg < 2:68942/99‑1 (MQ=255) ttGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTgcgc > 2:121771/1‑99 (MQ=255) ttGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTgcgc > 1:964378/1‑99 (MQ=255) gCACTCTTCGATGTCTTTATTGATCGATGCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCACCAGGCGAATATGCGTCAGCGGCGTGCGCaa < 2:2784760/99‑1 (MQ=255) aCTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGt > 2:2635575/1‑99 (MQ=255) aCTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGt > 2:62418/1‑99 (MQ=255) tctTCGATATCTTTATTGATCGATTCTTCCAGATAGCCATCCTGCTCGCTCGTGATCTCAGTTGCCGCGCGAATACGCGTCTATAGCGTGCCCAAGCCg > 2:1091185/1‑99 (MQ=255) tctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCg > 1:2827726/1‑99 (MQ=255) tctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCg < 2:2275515/99‑1 (MQ=255) tCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGa < 2:2002380/99‑1 (MQ=255) tCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGa < 1:527033/99‑1 (MQ=255) tCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGa < 2:3253827/99‑1 (MQ=255) tCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGa < 2:1550722/99‑1 (MQ=255) cGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGAc > 2:3505382/1‑99 (MQ=255) gATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACt > 1:1515163/1‑99 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTAc < 2:2803369/99‑1 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTAc < 2:2423153/99‑1 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTAc < 2:185282/99‑1 (MQ=255) tCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTAcc < 2:1153555/99‑1 (MQ=255) cTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTAccc < 1:1279395/99‑1 (MQ=255) aTTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGc < 1:2283453/99‑1 (MQ=255) ttGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGcc > 2:2803925/1‑99 (MQ=255) tGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCa < 2:547113/99‑1 (MQ=255) gATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCAt > 2:462469/1‑99 (MQ=255) tCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATca > 1:1207122/1‑99 (MQ=255) gATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagc > 2:778241/1‑99 (MQ=255) aTTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagca > 2:1560576/1‑99 (MQ=255) aTTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagca > 2:874155/1‑99 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag > 2:2940199/1‑99 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag < 1:564134/99‑1 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag < 1:2495048/99‑1 (MQ=255) tGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGt > 2:303521/1‑99 (MQ=255) gCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTg > 1:3176378/1‑99 (MQ=255) ccAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGc < 1:3275536/99‑1 (MQ=255) cAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCg > 2:3211323/1‑99 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt < 1:2334156/99‑1 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt > 1:208145/1‑99 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt > 1:3704115/1‑99 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt > 1:1230630/1‑99 (MQ=255) aTAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTc < 1:1981514/99‑1 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 1:1810262/1‑99 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 2:2375816/1‑99 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 1:1739425/1‑99 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 2:1735836/1‑99 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa < 1:2248135/99‑1 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 1:1685364/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc > 1:3156967/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc < 2:140473/99‑1 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc > 2:189088/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc > 2:476279/1‑99 (MQ=255) ccATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATcc > 1:943256/1‑99 (MQ=255) ccATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATcc < 2:2182836/99‑1 (MQ=255) aTCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGc > 1:861823/1‑99 (MQ=255) tCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGcc > 1:2124254/1‑99 (MQ=255) tCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGcc > 2:347061/1‑99 (MQ=255) ccTGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCa < 2:1191209/99‑1 (MQ=255) tGCTCGCTCATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGt < 2:2663661/99‑1 (MQ=255) ctcgctcATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTg > 2:1437291/1‑99 (MQ=255) tcgctcATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGc < 2:3440979/99‑1 (MQ=255) tcgctcATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGc < 2:3375702/99‑1 (MQ=255) cgctcATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTTCt < 2:1796884/99‑1 (MQ=255) ctcATCATCTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTa > 1:1798071/1‑99 (MQ=255) tcatcaTCTCAGTCGCCAGGCAAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa > 2:2545387/1‑99 (MQ=255) catcatCTCAGTCGCCTGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAac < 2:3490648/99‑1 (MQ=255) atcatcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAaca > 1:1130994/1‑99 (MQ=255) atcatcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAaca < 1:1882152/99‑1 (MQ=255) tcatcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAacac < 2:824462/99‑1 (MQ=255) tcatcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAacac > 2:1614473/1‑99 (MQ=255) tcatcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAacac < 2:722698/99‑1 (MQ=255) catcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAcc > 1:2587080/1‑99 (MQ=255) atcTCAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCa < 2:1587625/99‑1 (MQ=255) ctcAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgc < 2:3615644/99‑1 (MQ=255) ctcAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgc < 1:2185030/99‑1 (MQ=255) tcAGTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgcc < 2:1447213/99‑1 (MQ=255) gTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgccgcc < 1:198641/99‑1 (MQ=255) gTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgccgcc > 2:367558/1‑99 (MQ=255) gTCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgccgca < 2:607741/99‑2 (MQ=255) tCGCCAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCa < 2:1418914/99‑1 (MQ=255) ccAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCatat < 1:2677133/99‑1 (MQ=255) cAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATg > 1:1697988/1‑99 (MQ=255) cAGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATg < 1:3598256/99‑1 (MQ=255) aGGCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATgg < 2:1671258/99‑1 (MQ=255) ggCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGt > 1:2618003/1‑99 (MQ=255) gCGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGtt > 1:674542/1‑99 (MQ=255) cGAATATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTa < 2:3488559/99‑1 (MQ=255) aaTATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTaaa < 1:2263345/99‑1 (MQ=255) aaTATGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTaaa < 2:501412/99‑1 (MQ=255) atatGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAg > 2:3123725/1‑99 (MQ=255) | TGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAG > NC_000913/3535021‑3535212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |