Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423691–3424234	3424608–3424238	5–918	37 [35]	[35] 37	[rrfD]–[rrlD]	[rrfD],[rrlD]

ACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGT  >  NC_000913/3424555‑3424707                                                       |                                                                                                    acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                         <  1:1287184/99‑1 (MQ=32)          aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                                >  1:1317142/1‑99 (MQ=34)             ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt                                             >  2:1925050/1‑99 (MQ=34)                   tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTa                                      >  2:153249/1‑99 (MQ=34)                   tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTa                                      <  1:782786/99‑1 (MQ=33)                    aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTac                                     <  1:1792985/99‑1 (MQ=34)                      gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTacac                                   >  1:1941391/1‑99 (MQ=33)                        gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACAt                                 <  2:712649/99‑1 (MQ=34)                        gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACAt                                 <  1:463199/99‑1 (MQ=34)                           aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCaa                              <  1:2405197/99‑1 (MQ=34)                            aCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAg                             >  2:549461/1‑99 (MQ=33)                              gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGc                           >  2:2292416/1‑99 (MQ=34)                              gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGc                           >  2:1973266/1‑99 (MQ=34)                                  gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCaa                       <  2:541722/99‑1 (MQ=33)                                  gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCaa                       <  2:1831247/99‑1 (MQ=34)                                   aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAAt                      >  2:1665054/1‑99 (MQ=34)                                    aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATg                     <  1:1311658/99‑1 (MQ=34)                                    aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATg                     >  1:1568755/1‑99 (MQ=33)                                     cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGt                    >  2:2324973/1‑99 (MQ=34)                                       tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTc                  >  2:240759/1‑99 (MQ=34)                                       tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTc                  >  2:2478790/1‑99 (MQ=34)                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCa                 <  2:730449/99‑1 (MQ=33)                                          taCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGAAGACTGGCGTCCAGACTTCTAAGCATCCCACCTA‑TCCTACACATCAAGGCCCCATTTTCCgt               >  2:673748/2‑99 (MQ=11)                                           aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCGTCCACACGTCTCAGCCACCCACCTG‑ACCTACACATCAAGGCTCAATGTTCAgtg              <  2:586999/99‑1 (MQ=11)                                            cATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAgtgt             <  1:2151551/99‑1 (MQ=34)                                              ttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCa           >  2:350143/1‑99 (MQ=33)                                               tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCaa          <  2:615666/99‑1 (MQ=33)                                                 aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc        >  2:468718/1‑99 (MQ=33)                                                 aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc        >  1:2391505/1‑99 (MQ=34)                                                 aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc        <  1:181625/99‑1 (MQ=34)                                                   gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTTCACACGT‑TACGGCCACCACCCAGATCTACACATCAAGGCTCAATGTTCAGTGTCAAGCta      <  2:1886842/99‑1 (MQ=1)                                                   gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCta      <  2:1963394/99‑1 (MQ=34)                                                    ggtggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat     >  1:276778/1‑99 (MQ=34)                                                      tggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg   <  2:1787336/99‑1 (MQ=34)                                                      tggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg   >  1:2294658/1‑99 (MQ=34)                                                       ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt  >  2:1235950/1‑99 (MQ=34)                                                       ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt  <  1:501026/99‑1 (MQ=34)                                                       |                                                                                                    ACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGT  >  NC_000913/3424555‑3424707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑