Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 366,300 Δ1 bp 100% coding (6/3075 nt) lacZ ← beta‑galactosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913366,3000G.99.6% 177489.6 / inf 49064coding (6/3075 nt)lacZbeta‑galactosidase
Reads supporting (aligned to +/- strand):  ref base G (92/98);  new base . (24803/24057);  total (24902/24162)
Fisher's exact test for biased strand distribution p-value = 5.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 51701 total aligned reads displayed.

GCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAG  >  NC_000913/366202‑366398
                                                                                                  |                                                                                                  
ggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATg                                                                                                    <  1:666153‑M2/15‑1 (MQ=255)
   cagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtcccgagctcGAATTCGTAATcatgtca                                                                                                 <  1:1130754‑M2/18‑4 (MQ=255)
   cagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATcatgtca                                                                                                 <  1:1817346‑M2/18‑4 (MQ=255)
    agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                                <  1:245128‑M2/19‑5 (MQ=255)
    agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                                >  1:2016072‑M2/81‑95 (MQ=255)
     gcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATa                                                                                              <  2:1572507‑M2/20‑1 (MQ=255)
     gcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATa                                                                                              >  2:2164290‑M2/80‑99 (MQ=255)
     gcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATa                                                                                              >  2:2351883‑M2/80‑99 (MQ=255)
      cccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAg                                                                                             >  1:2644553‑M2/79‑99 (MQ=255)
      cccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAg                                                                                             >  2:1381583‑M2/79‑99 (MQ=255)
       ccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGc                                                                                            <  2:1637690‑M2/22‑1 (MQ=255)
        cgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCt                                                                                           <  2:2416841‑M2/23‑1 (MQ=255)
        cgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCt                                                                                           >  2:2536971‑M2/77‑99 (MQ=255)
         gagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTg                                                                                          <  2:1445866‑M2/24‑1 (MQ=255)
         gagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTg                                                                                          <  1:1065594‑M2/24‑1 (MQ=255)
          agcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGt                                                                                         <  2:3237542‑M2/25‑1 (MQ=255)
          agcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGt                                                                                         <  1:3213858‑M2/25‑1 (MQ=255)
          agcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGt                                                                                         >  2:361815‑M2/75‑99 (MQ=255)
           gcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGtt                                                                                        <  2:2789906‑M2/26‑1 (MQ=255)
            cgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGttt                                                                                       >  1:3085721‑M2/73‑99 (MQ=255)
            cgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGttt                                                                                       <  2:1841304‑M2/27‑1 (MQ=255)
            cgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGttt                                                                                       <  1:1190687‑M2/27‑1 (MQ=255)
             gagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTc                                                                                      >  1:1689509‑M2/72‑99 (MQ=255)
             gagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTc                                                                                      <  2:177537‑M2/28‑1 (MQ=255)
              agttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTcc                                                                                     >  1:920924‑M2/71‑99 (MQ=255)
               gttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCt                                                                                    >  1:1750084‑M2/70‑99 (MQ=255)
               gttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCt                                                                                    <  2:124880‑M2/30‑1 (MQ=255)
                  ccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgtg                                                                                 <  1:2958343‑M2/33‑1 (MQ=255)
                  ccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgtg                                                                                 <  2:2225931‑M2/33‑1 (MQ=255)
                     tgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGa                                                                              <  2:3048909‑M2/36‑1 (MQ=255)
                        cggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAAt                                                                           <  2:3425221‑M2/39‑1 (MQ=255)
                        cggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAAt                                                                           <  1:1317922‑M2/39‑1 (MQ=255)
                         ggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAAtt                                                                          >  2:259745‑M2/60‑99 (MQ=255)
                            tgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGtt                                                                       >  1:2514606‑M2/57‑99 (MQ=255)
                             gtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTa                                                                      <  2:1968871‑M2/44‑1 (MQ=255)
                             gtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTa                                                                      <  1:603520‑M2/44‑1 (MQ=255)
                              tgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTAt                                                                     <  1:986040‑M2/45‑1 (MQ=255)
                              tgaagaaaaagtgaatgatgtagccgtcaagatgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTAt                                                                     <  2:118144‑M2/45‑1 (MQ=255)
                                 agaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCg                                                                  >  1:100007‑M2/52‑99 (MQ=255)
                                  gaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGc                                                                 >  1:2700518‑M2/51‑99 (MQ=255)
                                    aaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTc                                                               >  1:3280945‑M2/49‑99 (MQ=255)
                                     aaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTca                                                              <  2:1113744‑M2/52‑1 (MQ=255)
                                      aagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCGTGTGTGAAATTGTTATCCGCTcac                                                             >  1:3342026‑M2/47‑99 (MQ=255)
                                      aagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTcac                                                             >  2:2916317‑M2/47‑99 (MQ=255)
                                       agtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTcaca                                                            >  1:2892371‑M2/46‑99 (MQ=255)
                                           aatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTc                                                        <  2:1908378‑M2/58‑1 (MQ=255)
                                           aatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTc                                                        >  2:1312867‑M2/42‑99 (MQ=255)
                                              gatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcac                                                     <  1:2264139‑M2/61‑1 (MQ=255)
                                              gatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcac                                                     >  2:3110878‑M2/39‑99 (MQ=255)
                                               atgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcaca                                                    >  1:732717‑M2/38‑99 (MQ=255)
                                               atgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcaca                                                    <  1:3406110‑M2/62‑1 (MQ=255)
                                                tgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcacac                                                   >  1:2579991‑M2/37‑99 (MQ=255)
                                                  tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                                 >  2:2662665‑M2/35‑99 (MQ=255)
                                                  tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                                 <  2:298111‑M2/65‑1 (MQ=255)
                                                  tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                                 <  2:74468‑M2/65‑1 (MQ=255)
                                                  tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                                 <  1:798539‑M2/65‑1 (MQ=255)
                                                    gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                               <  1:283032‑M2/67‑1 (MQ=255)
                                                      cgtcaagttgtcatgattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                             <  1:538021‑M2/69‑1 (MQ=255)
                                                       gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                                            >  2:3173596‑M2/30‑99 (MQ=255)
                                                       gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                                            >  1:1506342‑M2/30‑99 (MQ=255)
                                                        tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                                           >  1:1949477‑M2/29‑99 (MQ=255)
                                                        tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                                           >  1:2144497‑M2/29‑99 (MQ=255)
                                                        tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                                           >  2:682012‑M2/29‑99 (MQ=255)
                                                         caagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGa                                          <  1:860161‑M2/72‑1 (MQ=255)
                                                          aagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAg                                         >  2:3488594‑M2/27‑99 (MQ=255)
                                                          aagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAg                                         <  1:474441‑M2/73‑1 (MQ=255)
                                                           agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                        <  2:555301‑M2/74‑1 (MQ=255)
                                                            gttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGcc                                       <  2:272480‑M2/75‑1 (MQ=255)
                                                             ttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCg                                      >  2:3361181‑M2/24‑99 (MQ=255)
                                                             ttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCg                                      >  2:2852054‑M2/24‑99 (MQ=255)
                                                               gtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGa                                    >  1:2326208‑M2/22‑99 (MQ=255)
                                                                tcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGaa                                   <  2:1507539‑M2/79‑1 (MQ=255)
                                                                 cataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAg                                  >  1:2388010‑M2/20‑99 (MQ=255)
                                                                  ataattggtaccgagatcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGc                                 >  2:489994‑M2/19‑99 (MQ=255)
                                                                   taattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCa                                <  2:871884‑M2/82‑1 (MQ=255)
                                                                      ttggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATaa                             >  1:2205035‑M2/15‑99 (MQ=255)
                                                                        ggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAg                           <  1:1381897‑M2/87‑1 (MQ=255)
                                                                        ggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAg                           >  2:1050947‑M2/13‑99 (MQ=255)
                                                                         gtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgt                          <  1:1443214‑M2/88‑1 (MQ=255)
                                                                         gtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgt                          >  1:3151435‑M2/12‑99 (MQ=255)
                                                                          taccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtg                         <  1:1629356‑M2/89‑1 (MQ=255)
                                                                            ccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa                       >  1:1565012‑M2/9‑99 (MQ=255)
                                                                               agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                    >  2:424730‑M2/6‑99 (MQ=255)
                                                                                gctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGc                   >  1:2767438‑M2/5‑99 (MQ=255)
                                                                                 ctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGcc                  >  1:406565‑M2/4‑99 (MQ=255)
                                                                                  tcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCt                 >  2:2099170‑M2/3‑99 (MQ=255)
                                                                                    gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGGAGCATAAAGTGTAAAGCCTgg               <  1:3535911/99‑1 (MQ=255)
                                                                                    gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgg               >  2:618894/1‑99 (MQ=255)
                                                                                    gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgg               >  2:1703360/1‑99 (MQ=255)
                                                                                    gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgg               <  2:3298298/99‑1 (MQ=255)
                                                                                     aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg              >  1:188645/1‑99 (MQ=255)
                                                                                     aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg              >  2:806015/1‑99 (MQ=255)
                                                                                     aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg              >  1:1257213/1‑99 (MQ=255)
                                                                                     aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg              >  2:2477167/1‑99 (MQ=255)
                                                                                         cGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGc          <  2:939285/99‑1 (MQ=255)
                                                                                           tAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCt        >  2:2290617/1‑99 (MQ=255)
                                                                                           tAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCt        <  1:3472201/99‑1 (MQ=255)
                                                                                            aaTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTa       <  1:2080359/99‑1 (MQ=255)
                                                                                             aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa      <  1:3022378/99‑1 (MQ=255)
                                                                                             aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa      <  2:2032914/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
GCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAG  >  NC_000913/366202‑366398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: