| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 986,862 | IS1 (–) +9 bp | 31.1% | coding (113‑121/1089 nt) | ompF ← | outer membrane porin F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 29 (0.280) | 26/174 | NT | 26.5% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 986862 = | 72 (0.760) | coding (121/1089 nt) | ompF | outer membrane porin F | |||||
| * | ? | NC_000913 | = 986870 | 72 (0.750) | 36 (0.340) | 35/176 | NT | 31.0% | coding (113/1089 nt) | ompF | outer membrane porin F |
| ? | NC_000913 | = 1050545 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291303‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGAT > NC_000913/986862‑986955 taAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:1021095/3‑99TCAGTAGCTGAACAGGAGGGCCAGCTTATAGAAACAGAAGCCACTGGAGCACCTGAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:2510254/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:19460/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:953104/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:937122/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 2:621843/99‑1TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:552849/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:143377/99‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAC < 1:2580758/99‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAC > 1:71590/1‑99 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCGCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTT > 2:2188761/1‑99 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGT > 2:2017094/1‑99 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATC < 2:1963583/99‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTT > 2:701517/1‑99 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTT > 2:2575965/1‑99 GAAAGAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGT > 2:2861755/1‑99 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGT > 2:2616138/1‑99 AGAAACCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAATAAGTTGGCAGCATCACCCAACCGCTTTACCGTACAGATCGACTTTGTTGCCA < 2:270171/99‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTG < 2:2000432/99‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTA > 1:99680/1‑99 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATA > 1:998896/1‑99 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATA < 2:2084666/99‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATT < 2:2397181/99‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATT < 1:2443476/99‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTC < 1:1059238/99‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCT > 2:2991368/1‑99 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAG > 2:1797566/1‑99 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGT < 1:227880/99‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGT < 2:2269336/99‑1 CACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACC > 1:574349/1‑99 AATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTA > 1:3043909/1‑99 ATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTAC < 1:1881790/99‑1 CAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTA < 1:1028963/99‑1 AGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAA > 2:1896261/1‑99 GTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAG > 1:1956659/1‑99 GTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAG < 1:2987199/99‑1 TTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGC < 2:1404196/99‑1 TGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCA < 1:2151101/99‑1 TGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCA > 2:1813104/1‑99 TCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGAT < 2:2540504/99‑1 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291303‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGAT > NC_000913/986862‑986955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |