Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 986,937 IS5 (+) +4 bp coding (43‑46/1089 nt) ompF ← outer membrane porin F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)142 (1.240) 73/196 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 986937 = 0 (0.000)coding (46/1089 nt) ompF outer membrane porin F
* ? NC_000913 = 275149NA (NA)131 (1.150) 78/196 0.3 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 986940 0 (0.000)coding (43/1089 nt) ompF outer membrane porin F

Only 100 of 142 total aligned reads displayed.

GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAAT  >  NC_000913/986937‑987032
                                                                                                                                                                                                  
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                 <  1:2812244/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                 <  1:2903178/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                 <  2:2964255/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                 <  1:2389439/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                 <  1:1989954/99‑1
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCGCCGCTTATTCGCACCTTCCCT                                                                                                >  2:2566047/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  2:660598/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                <  1:2784060/99‑1
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  1:563584/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  1:891107/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  2:1115008/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  2:1356041/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                >  2:1682222/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                <  1:1308831/99‑1
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                               >  2:1717612/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                               >  1:612873/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                               >  2:2793563/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                               <  2:4845/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGACATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                              <  2:1033898/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                              <  2:1947333/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                              >  1:473855/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                              >  1:2630319/1‑99
    CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                             <  1:2427515/99‑1
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                            >  1:1022705/1‑99
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                            <  1:2780293/99‑1
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                            <  1:178871/99‑1
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                           >  1:1646138/1‑99
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                           >  2:114480/1‑99
        GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAG                                                                                         <  2:2808673/99‑1
        GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAG                                                                                         >  1:2478948/1‑99
           TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAG                                                                                      <  2:1400624/99‑1
            TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGG                                                                                     <  2:2504364/99‑1
            TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGG                                                                                     <  2:1133304/99‑1
              ACGGGAGAAAAAATCGGCTCAAACATGAAGTAATGAAATGACTGAGTCAGCCGATAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACATACCAGGGA                                                                                   <  2:221724/99‑1
              ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGA                                                                                   <  2:1156009/99‑1
              ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGA                                                                                   <  1:2848518/99‑1
               CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGAC                                                                                  <  1:362735/99‑1
                 GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGA                                                                                <  2:2175884/99‑1
                  GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGAT                                                                               >  1:1632677/1‑99
                   AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATC                                                                              >  1:2577099/1‑99
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                            <  2:2370939/99‑1
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                            <  2:768399/99‑1
                      AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACT                                                                           <  1:100120/99‑1
                      AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACT                                                                           <  1:1989331/99‑1
                       AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTG                                                                          <  2:2275381/99‑1
                       AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTG                                                                          <  2:530508/99‑1
                       AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTG                                                                          >  2:1355362/1‑99
                        AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGC                                                                         <  2:2202178/99‑1
                        AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGC                                                                         >  2:554074/1‑99
                        AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGC                                                                         <  1:2943999/99‑1
                           TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAG                                                                      >  1:40949/1‑99
                             GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAA                                                                    <  2:1233645/99‑1
                              GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAAT                                                                   >  2:2708583/1‑99
                               CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATA                                                                  <  1:1200020/99‑1
                                TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATAT                                                                 >  1:2345130/1‑99
                                   AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGC                                                              >  1:2254885/1‑99
                                   AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGC                                                              >  2:2612657/1‑99
                                     CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGC                                                            <  1:1920478/99‑1
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                        >  1:2995112/1‑99
                                          AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACAATCACTGCCAGAATATTGCGCTTCAT                                                       <  2:1913778/99‑1
                                            AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCA                                                     >  1:2466218/1‑99
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                  <  2:2706309/99‑1
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                  <  2:1853710/99‑1
                                                   ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTA                                              <  1:2660138/99‑1
                                                   ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTA                                              <  2:1300157/99‑1
                                                     GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATT                                            >  1:2181384/1‑99
                                                      ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTA                                           >  1:2975252/1‑99
                                                      ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTA                                           <  1:416903/99‑1
                                                       CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTAC                                          <  2:1751352/99‑1
                                                        TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACC                                         <  1:2295071/99‑1
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                       <  2:1677445/99‑1
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                       <  2:2665991/99‑1
                                                           GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTC                                      >  2:100419/1‑99
                                                            TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCA                                     >  1:267869/1‑99
                                                             cgGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTCTTACCCTCAT                                    >  2:1021005/3‑99
                                                              AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATG                                   >  2:628573/1‑99
                                                                  GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTT                               <  2:2165486/99‑1
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                              >  1:1427844/1‑99
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                              <  2:338842/99‑1
                                                                      AGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTT                           <  2:2503826/99‑1
                                                                       GAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTT                          <  2:377969/99‑1
                                                                        AATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTA                         >  1:1697354/1‑99
                                                                         ATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTAT                        >  1:646082/1‑99
                                                                           TTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGA                      <  2:1460184/99‑1
                                                                              CCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACAC                   <  1:878263/99‑1
                                                                               CCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACC                  <  1:2718548/99‑1
                                                                                  CTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGC               <  2:2247945/99‑1
                                                                                  CTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGC               <  2:2798494/99‑1
                                                                                   TTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCC              <  1:354438/99‑1
                                                                                      TTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACT           >  2:2048012/1‑99
                                                                                      TTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACT           >  2:2045626/1‑99
                                                                                        CGCACCTTCCCTAACAGGGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCAGGGTTTTTTTTATGACACCGGCCACTGC         <  2:2868796/99‑1
                                                                                        CGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGC         <  2:1692447/99‑1
                                                                                         GCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCC        >  2:1743270/1‑99
                                                                                           ACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGT      <  1:752756/99‑1
                                                                                             CTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCA    >  1:2827936/1‑99
                                                                                             CTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCA    <  2:781145/99‑1
                                                                                              TTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAA   <  1:628573/99‑1
                                                                                               TCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAAT  <  2:1825522/99‑1
                                                                                               TCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAAT  <  2:10460/99‑1
                                                                                                                                                                                                  
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAAT  >  NC_000913/986937‑987032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.