Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423682–3424234	3424602–3424238	5–921	62 [59]	[61] 62	[rrfD]–[rrlD]	[rrfD],[rrlD]

CACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGC  >  NC_000913/3424554‑3424701                                                  |                                                                                                    cacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                                                   >  2:1250203/1‑99 (MQ=31)   cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                 <  1:1139371/99‑1 (MQ=33)    tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                >  1:2096965/1‑99 (MQ=34)     gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                                               <  2:505936/99‑1 (MQ=34)      tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                              >  2:1721738/1‑99 (MQ=33)      tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                              >  2:1287337/1‑99 (MQ=34)      tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                              <  1:2869605/99‑1 (MQ=34)      tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                              <  1:2910157/99‑1 (MQ=33)       ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt                                             <  2:2671613/99‑1 (MQ=34)        cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc                                            <  1:2408195/99‑1 (MQ=34)        cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc                                            <  1:2351529/99‑1 (MQ=33)         gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTACA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                           >  2:1886759/1‑99 (MQ=18)         gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                           >  2:2587049/1‑99 (MQ=34)         gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                           <  1:1877571/99‑1 (MQ=34)         gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                           >  1:902665/1‑99 (MQ=34)           aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                         <  1:1919340/99‑1 (MQ=33)            aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                         <  2:2496514/99‑1 (MQ=16)            aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                        >  1:2747709/1‑99 (MQ=33)             cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                       <  2:1773964/99‑1 (MQ=34)             cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                       <  1:2628263/99‑1 (MQ=34)              ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt                                      >  2:180378/1‑99 (MQ=34)                ggATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                                    >  1:1313204/1‑99 (MQ=33)                ggATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                                    <  1:1630072/99‑1 (MQ=34)                     aCGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                               <  1:2141431/99‑1 (MQ=34)                      cGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                              >  2:2041353/1‑99 (MQ=33)                         gTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                           >  2:1359067/1‑99 (MQ=34)                          tCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATc                          <  1:2551511/99‑1 (MQ=33)                          tCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATc                          <  2:1814722/99‑1 (MQ=34)                             aCGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                       >  1:2420768/1‑99 (MQ=34)                              cGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                      <  2:1721687/99‑1 (MQ=33)                                ttAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCt                    >  1:2127061/1‑99 (MQ=34)                                ttAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCt                    >  2:150130/1‑99 (MQ=33)                                 tAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTc                   >  1:1798141/1‑99 (MQ=34)                                   gAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCaa                 >  2:1247581/1‑99 (MQ=34)                                   gAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCaa                 >  1:182393/1‑99 (MQ=34)                                   gAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCaa                 >  1:614929/1‑99 (MQ=34)                                   gAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCaa                 <  1:1971107/99‑1 (MQ=33)                                    aaCATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAAt                >  2:530358/1‑99 (MQ=34)                                     aCATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg               >  1:75366/1‑99 (MQ=34)                                     aCATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg               <  1:420935/99‑1 (MQ=34)                                     aCATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg               <  1:2828371/99‑1 (MQ=34)                                      cATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt              >  2:1851700/1‑99 (MQ=34)                                      cATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt              <  1:1135406/99‑1 (MQ=34)                                      cATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt              <  1:114437/99‑1 (MQ=34)                                      cATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt              >  1:1225238/1‑99 (MQ=34)                                      cATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt              <  1:2714345/99‑1 (MQ=33)                                       aTCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt             >  2:797891/1‑99 (MQ=34)                                       aTCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt             >  2:2136544/1‑99 (MQ=34)                                       aTCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt             <  2:2330903/99‑1 (MQ=33)                                         cAAAGATTAAA‑GGGTGGTATTTCAAGGGCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGATCAATGTTCa           >  2:2325504/1‑99 (MQ=255)                                         cAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa           <  2:1021833/99‑1 (MQ=34)                                           aaCATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt         >  1:283489/1‑99 (MQ=33)                                           aaCATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt         <  1:1080783/99‑1 (MQ=34)                                            aCATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg        <  2:2232281/99‑1 (MQ=34)                                            aCATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg        <  1:874111/99‑1 (MQ=34)                                            aCATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg        >  1:925443/1‑99 (MQ=34)                                             cATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt       >  2:2707955/1‑99 (MQ=34)                                             cATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt       <  2:956955/99‑1 (MQ=33)                                              aTTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc      >  2:133824/1‑99 (MQ=34)                                               ttAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa     <  1:461094/99‑1 (MQ=34)                                                tAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa    >  2:2885910/1‑99 (MQ=33)                                                  aa‑GGGTGGTATTTCACGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTCCACATCAAGGCTCAATGTTCAGTGTCAAGc  >  2:790546/1‑99 (MQ=16)                                                  |                                                                                                    CACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAA‑GGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGC  >  NC_000913/3424554‑3424701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑