| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 71,175 | A→G | 100% | R263R (CGA→CGG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 71,175 | 0 | A | G | 100.0% | 143045.3 / ‑6.7 | 53754 | R263R (CGA→CGG) | araC | DNA‑binding transcriptional dual regulator AraC |
| Reads supporting (aligned to +/- strand): ref base A (39/43); new base G (27005/26619); total (27061/26693) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 53754 total aligned reads displayed.
GCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAA > NC_000913/71078‑71272 | ccAGGCGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑aa > 1:1000057/2‑99 (MQ=255) cAGGCGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑aaa > 1:2320574/1‑99 (MQ=255) cAGGCGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑aaa < 1:447205/99‑1 (MQ=255) gCGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑aaaaaa > 2:297194/1‑99 (MQ=255) gCGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑aaaaaa > 1:2428868/1‑99 (MQ=255) cGAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAAt < 1:2963820/99‑1 (MQ=255) gAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATg > 1:393731/1‑99 (MQ=255) gAAGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATg < 1:1493472/99‑1 (MQ=255) aaGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGc > 2:775313/1‑99 (MQ=255) aaGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGc > 1:2743/1‑99 (MQ=255) aaGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGc > 2:1923122/1‑99 (MQ=255) aaGCTGCTTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGc < 2:2210535/99‑1 (MQ=255) gctgctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCAc < 1:1656340/99‑1 (MQ=255) gctgctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCAc > 2:1163723/1‑99 (MQ=255) ctgctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCAcc > 1:1713807/1‑99 (MQ=255) tgctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCg < 1:660765/99‑1 (MQ=255) tgctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCg < 2:398509/99‑1 (MQ=255) gctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCgg > 1:994112/1‑99 (MQ=255) gctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCgg < 1:2209903/99‑1 (MQ=255) ctTTTGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCggg < 2:2866782/99‑1 (MQ=255) tttGAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGc < 1:2100281/99‑1 (MQ=255) tttGAGCACCACCCGGATGCCTATCACCACCGTCGGTCGCAATTTTGGTTTTGACGATCAACTCTTTTTCTCGCCGGTCTTT‑CCAAAATGCACCGGGGc > 2:457612/1‑99 (MQ=255) gAGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAg > 2:1382879/1‑99 (MQ=255) aGCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGc < 2:889426/99‑1 (MQ=255) gCACCACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGcc < 1:105705/99‑1 (MQ=255) ccaCCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCcga > 2:1869424/3‑99 (MQ=255) ccaCCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCcga < 2:1711332/97‑1 (MQ=255) aCCCGGATGCCTTTCGCCACCGTCGGTCCCAATGTTGGTTTTGATGATCAACTCTATTTCTCGCGGGTATTTAAAAAAATGCACCGGGGCCAGCCcgag < 2:2591600/99‑1 (MQ=255) cGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCcgagcgag < 2:2100205/99‑1 (MQ=255) cGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCcgagcgag > 1:1438376/1‑99 (MQ=255) ggATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGt < 1:71583/99‑1 (MQ=255) gATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGtt > 1:77278/1‑99 (MQ=255) gATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGtt > 1:1544833/1‑99 (MQ=255) tGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGttcc > 1:2638175/1‑97 (MQ=255) tGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGttcc < 2:946083/99‑3 (MQ=255) tGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGttcc < 2:1110817/99‑3 (MQ=255) tGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGttcc > 2:275800/1‑97 (MQ=255) gCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCg < 2:1325932/99‑1 (MQ=255) gCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCg > 1:2155951/1‑99 (MQ=255) cTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTg < 2:2809504/99‑1 (MQ=255) tATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGc > 1:1601338/1‑99 (MQ=255) tATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGc > 1:338753/1‑99 (MQ=255) tCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCg > 2:67003/1‑99 (MQ=255) tCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTCCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCg > 2:614528/1‑99 (MQ=255) cGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCgg < 1:1275105/99‑1 (MQ=255) gCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGt < 2:1553036/99‑1 (MQ=255) gCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGt < 2:561465/99‑1 (MQ=255) cACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtg > 2:1981172/1‑99 (MQ=255) cACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtg > 2:724095/1‑99 (MQ=255) aCCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtgt > 2:2920246/1‑99 (MQ=255) ccGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtgtg > 2:1817085/1‑99 (MQ=255) ccGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtgtg > 2:2646385/1‑99 (MQ=255) tcggtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTgaag > 2:160712/1‑99 (MQ=255) ggtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTgaagaa < 1:1329027/99‑1 (MQ=255) ggtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTgaagaa > 1:1877079/1‑99 (MQ=255) gtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaa > 1:55600/1‑99 (MQ=255) gtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaa > 1:3017103/1‑99 (MQ=255) tcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaa > 1:2854214/1‑99 (MQ=255) tcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaa < 1:1110681/99‑1 (MQ=255) tcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaa > 1:82485/1‑99 (MQ=255) tcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaa > 1:2043879/1‑99 (MQ=255) aTGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGa > 1:2373295/1‑99 (MQ=255) tGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGaa > 1:937146/1‑99 (MQ=255) tGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGaa < 2:2038786/99‑1 (MQ=255) tGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGaa > 1:2531741/1‑99 (MQ=255) ttGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatg > 1:60965/1‑99 (MQ=255) ggTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatgat > 2:1498690/1‑99 (MQ=255) gTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatgatg > 1:2264610/1‑99 (MQ=255) gTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatgatg > 1:1770858/1‑99 (MQ=255) ttttGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGt < 1:1988709/99‑1 (MQ=255) tGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGc > 1:2482547/1‑99 (MQ=255) gACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGcc > 1:1931576/1‑99 (MQ=255) aCGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCg > 1:1222517/1‑99 (MQ=255) gATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTc < 2:1270660/99‑1 (MQ=255) aTCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCa > 2:302814/1‑99 (MQ=255) aTCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCa > 1:501682/1‑99 (MQ=255) aTCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCa > 1:1820113/1‑99 (MQ=255) aTCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCa > 2:1049217/1‑99 (MQ=255) tCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCaa < 1:1382918/99‑1 (MQ=255) tCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCaa < 1:2580750/99‑1 (MQ=255) cAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAg < 2:1218721/99‑1 (MQ=255) aaCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGt < 1:881672/99‑1 (MQ=255) aaCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGt > 2:242376/1‑99 (MQ=255) aCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGtt > 1:2691670/1‑99 (MQ=255) aCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGtt > 1:280248/1‑99 (MQ=255) aCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGtt > 2:510703/1‑99 (MQ=255) ctctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTg < 2:831660/99‑1 (MQ=255) ctctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTg > 2:1442566/1‑99 (MQ=255) ctctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTg < 2:2370057/99‑1 (MQ=255) ctctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTg < 2:2534929/99‑1 (MQ=255) tctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGt > 2:215621/1‑99 (MQ=255) tctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGt < 2:2479154/99‑1 (MQ=255) aTTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCAt > 1:1168587/1‑99 (MQ=255) tttCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATa > 2:2263167/1‑99 (MQ=255) ctcGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAAtt > 2:176308/1‑99 (MQ=255) cgcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTgg < 2:345997/99‑1 (MQ=255) cgcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTgg < 2:2318160/99‑1 (MQ=255) gcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGt > 2:1660496/1‑99 (MQ=255) gcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGt < 1:2910224/99‑1 (MQ=255) gcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGt > 2:2706466/1‑99 (MQ=255) | GCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAA > NC_000913/71078‑71272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |