Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp 100% [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 147 [0] [0] 144 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)123 (1.040) 81/174 NT 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 144 total aligned reads displayed.

GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235
                                                                                                  |                                                                                                  
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    <  1:1967250‑M2/1‑1 (MQ=255)
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    <  1:3029497‑M2/1‑1 (MQ=255)
 ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   <  1:1168541‑M2/2‑1 (MQ=255)
   ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACtt                                                                                                 >  1:1844114‑M2/96‑99 (MQ=255)
      agagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAg                                                                                              >  2:416351‑M2/93‑99 (MQ=255)
       gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             <  2:2595730‑M2/8‑1 (MQ=255)
        agcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGaa                                                                                            <  1:2265229‑M2/9‑1 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  1:1275205‑M2/10‑1 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           >  1:1629737‑M2/90‑99 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           >  1:363055‑M2/90‑99 (MQ=255)
          cagacaacggagaaatgtcatgatattgttacgtcaaggcaacaagaaattggtcttcaccaggattacatcatgattatggcgaaacACTTCAGAAcc                                                                                          >  2:149690‑M2/89‑99 (MQ=255)
           agacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCg                                                                                         >  1:1116571‑M2/88‑99 (MQ=255)
             acaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTg                                                                                       >  1:1693243‑M2/86‑99 (MQ=255)
              caacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                      <  2:351403‑M2/15‑1 (MQ=255)
              caacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                      >  1:2159922‑M2/85‑99 (MQ=255)
               aacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTggg                                                                                     <  2:1117706‑M2/16‑1 (MQ=255)
                acggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGt                                                                                    >  1:654129‑M2/83‑99 (MQ=255)
                   gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  1:1278249‑M2/80‑99 (MQ=255)
                    tgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATg                                                                                >  2:1456528‑M2/79‑99 (MQ=255)
                     gaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                               >  1:548153‑M2/78‑99 (MQ=255)
                      aaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGcc                                                                              <  2:451115‑M2/23‑1 (MQ=255)
                       aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             >  1:2148257‑M2/76‑99 (MQ=255)
                       aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             <  2:2296245‑M2/24‑1 (MQ=255)
                       aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             <  2:2350775‑M2/24‑1 (MQ=255)
                           tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         >  2:310971‑M2/72‑99 (MQ=255)
                           tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         >  1:2456438‑M2/72‑99 (MQ=255)
                             atggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                       <  2:27867‑M2/30‑1 (MQ=255)
                              tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      <  1:761579‑M2/31‑1 (MQ=255)
                                   ttgttacgtttaggtcacaagaaatttgtctgcacaaggattacatcatgattaaggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  2:2863024‑M2/64‑99 (MQ=255)
                                   ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  1:1744286‑M2/64‑99 (MQ=255)
                                   ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  2:515078‑M2/64‑99 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          >  1:1027152‑M2/57‑99 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  1:960084‑M2/43‑1 (MQ=255)
                                           tttaggtaacaagtaatttgtctgcacaaggaggacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTCGGt                                                         >  2:2662308‑M2/56‑99 (MQ=255)
                                            ttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCGTTGAAATCGAACAGGTTGGTa                                                        <  2:2576520‑M2/45‑1 (MQ=255)
                                             taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  2:2763578‑M2/46‑1 (MQ=255)
                                               ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  2:2242641‑M2/52‑99 (MQ=255)
                                               ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                     >  1:2067504‑M2/52‑99 (MQ=255)
                                                 taacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGca                                                   >  1:1811652‑M2/50‑99 (MQ=255)
                                                  aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcac                                                  >  1:1582357‑M2/49‑99 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  2:2552498‑M2/48‑99 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  2:1290171‑M2/48‑99 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 <  2:937802‑M2/52‑1 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  2:1047119‑M2/48‑99 (MQ=255)
                                                    caagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAg                                                >  1:1053641‑M2/47‑99 (MQ=255)
                                                    caagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAg                                                >  1:138975‑M2/47‑99 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  1:2979511‑M2/54‑1 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:2080578‑M2/54‑1 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:2432752‑M2/54‑1 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  2:1667343‑M2/54‑1 (MQ=255)
                                                      agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              >  2:2741081‑M2/45‑99 (MQ=255)
                                                        aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            <  2:2055049‑M2/57‑1 (MQ=255)
                                                        aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                            <  1:2070542‑M2/57‑1 (MQ=255)
                                                         aatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCg                                           >  2:2966947‑M2/42‑99 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          >  1:478237‑M2/41‑99 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  2:2245836‑M2/59‑1 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          >  1:2581011‑M2/41‑99 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          >  2:321373‑M2/41‑99 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  1:2999337‑M2/59‑1 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  2:1129374‑M2/40‑99 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         <  1:871201‑M2/60‑1 (MQ=255)
                                                            ttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACg                                        <  2:133449‑M2/61‑1 (MQ=255)
                                                            ttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACg                                        >  1:939491‑M2/39‑99 (MQ=255)
                                                             tgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACgg                                       <  1:1572983‑M2/62‑1 (MQ=255)
                                                               tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGca                                     >  1:2436544‑M2/36‑99 (MQ=255)
                                                               tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGca                                     >  2:1914880‑M2/36‑99 (MQ=255)
                                                                     caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               <  1:582676‑M2/70‑1 (MQ=255)
                                                                     caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAt                               >  2:1975392‑M2/30‑99 (MQ=255)
                                                                      aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                              <  1:1522447‑M2/71‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  2:76324‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  1:2841432‑M2/72‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:2429214‑M2/72‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:167058‑M2/72‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  1:2416059‑M2/72‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:2602511‑M2/72‑1 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        <  2:195529‑M2/77‑1 (MQ=255)
                                                                             acatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                       >  2:2935212‑M2/22‑99 (MQ=255)
                                                                              catcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcg                      >  2:248288‑M2/21‑99 (MQ=255)
                                                                               atcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgc                     >  2:3091603‑M2/20‑99 (MQ=255)
                                                                               atcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgc                     >  2:542835‑M2/20‑99 (MQ=255)
                                                                                 catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   <  1:2489983‑M2/82‑1 (MQ=255)
                                                                                 catgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCgcgc                   >  1:2896475‑M2/18‑99 (MQ=255)
                                                                                  atgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCt                  >  1:3005434‑M2/17‑99 (MQ=255)
                                                                                    gattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGa                <  1:2257843‑M2/85‑1 (MQ=255)
                                                                                     attatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGaa               >  2:2802274‑M2/14‑99 (MQ=255)
                                                                                     attatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGaa               >  2:2859024‑M2/14‑99 (MQ=255)
                                                                                     attatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGaa               >  2:2136569‑M2/14‑99 (MQ=255)
                                                                                       tatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACa             <  1:1488264‑M2/88‑1 (MQ=255)
                                                                                        atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  2:1639205‑M2/89‑1 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  1:370486‑M2/93‑1 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        >  2:1865671‑M2/7‑99 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        <  1:2949603‑M2/93‑1 (MQ=255)
                                                                                             gaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       <  2:1851803‑M2/94‑1 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  1:2969089‑M2/5‑99 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  1:1727758‑M2/5‑99 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  1:1141209‑M2/5‑99 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:1917838‑M2/5‑99 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  1:644011‑M2/5‑99 (MQ=255)
                                                                                                acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  2:330250‑M2/97‑1 (MQ=255)
                                                                                                  aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  >  1:510030/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: