| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542682 = | 75 (0.650) | 36 (0.350) | 32/158 | NT | 32.3% | intergenic (+49/‑433) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | 4542996 = | 84 (0.810) | intergenic (+363/‑119) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||
Only 100 of 278 total aligned reads displayed.
GGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTA > NC_000913/4542584‑4542780 | tatttctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatt > 1:602669‑M1/99‑99 (MQ=255)gggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAAT > 1:239025‑M1/1‑99 (MQ=255)gggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAAT > 1:1793010‑M1/1‑99 (MQ=255) tttctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatttt > 2:100517‑M1/98‑99 (MQ=255) ttctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTgg > 1:1863870‑M1/96‑99 (MQ=255) aagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGG > 2:2607386‑M1/1‑99 (MQ=255) ctaaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTgggg > 1:2858484‑M1/94‑99 (MQ=255) agaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGG > 2:1769541‑M1/1‑99 (MQ=255) taaatcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGc < 1:2146771‑M1/7‑1 (MQ=255) aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑A < 1:2602381‑M1/99‑1 (MQ=255) tcgacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑aaa < 1:1656791‑M1/11‑1 (MQ=255) gacatgggcagtcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAAc > 2:1623989‑M1/88‑99 (MQ=255) atCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Ttttg > 2:891726‑M1/1‑95 (MQ=255) atCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Atttt < 1:188642‑M1/99‑5 (MQ=255) ctcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttga > 1:2240423‑M1/1‑93 (MQ=255) ctcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGt > 1:892049/1‑99 (MQ=255) tAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactca < 1:2481551‑M1/99‑11 (MQ=255) aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCata > 1:154697/1‑99 (MQ=255) aaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcata > 2:1159218‑M1/1‑87 (MQ=255) aaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCatat < 2:1068606/99‑1 (MQ=255) cGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcataga > 2:1992228‑M1/1‑85 (MQ=255) cGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcataga > 2:2278488‑M1/1‑85 (MQ=255) tcgttctgtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCat > 2:952032‑M1/76‑99 (MQ=255) aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCata > 1:330811/1‑99 (MQ=255) aaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCataa > 1:2024548/1‑99 (MQ=255) aaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaa > 1:1355958‑M1/1‑81 (MQ=255) ttAAAAAGTGGAGAGGCTCTATTTAACTTGTTGTAAATAAAGTTAAAAAAAGAAATAAATACTAGACAATTGGGACC‑AAACTGTAAATATCatagataa > 2:293908/1‑99 (MQ=255) gtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCataaataa < 2:2449349‑M1/30‑1 (MQ=255) tAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagca > 1:2449349‑M1/1‑77 (MQ=255) tAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAg < 2:287529/99‑1 (MQ=255) gtacactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAg > 2:2686767‑M1/69‑99 (MQ=255) aaaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcat < 1:1022879‑M1/99‑24 (MQ=255) cactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGtt < 1:1736334‑M1/33‑1 (MQ=255) acactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGtt > 2:2054106‑M1/67‑99 (MQ=255) cactttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTa > 2:694547‑M1/66‑99 (MQ=255) actttgttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTa > 1:1577464‑M1/66‑99 (MQ=255) aaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcg < 2:803047‑M1/99‑26 (MQ=255) aaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTa > 2:1087369/1‑99 (MQ=255) aagagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTAc > 2:1901670/1‑99 (MQ=255) agagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACg < 1:2543194/99‑1 (MQ=255) agaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAAACTGTCCATATCATAAATAAGTTACGt > 2:2823605/1‑99 (MQ=255) aagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTAtt < 1:505144/99‑1 (MQ=255) ttttgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTAttt < 1:1621083‑M1/41‑1 (MQ=255) gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaac < 1:2181768‑M1/99‑34 (MQ=255) gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaa < 1:855177‑M1/99‑34 (MQ=255) gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaa < 1:2348287‑M1/99‑34 (MQ=255) tgtaaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTAttttt > 2:637561‑M1/57‑99 (MQ=255) aaacgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTtct < 1:2276565‑M1/46‑1 (MQ=255) tGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCa > 2:1807180/1‑99 (MQ=255) acgagtttgactgccaacactgcacagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCa < 2:1871544‑M1/48‑1 (MQ=255) aTTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcag > 1:1777969‑M1/1‑58 (MQ=255) tttAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGc > 1:1240009/1‑99 (MQ=255) tttAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGc > 2:447808/1‑99 (MQ=255) ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatt > 2:1687678‑M1/1‑51 (MQ=255) tATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttattt < 1:1207325‑M1/99‑50 (MQ=255) tATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaaaa > 1:1917025/1‑99 (MQ=255) tATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaaaa < 2:2527653/99‑1 (MQ=255) attgccaacactgcacagttttcacataaaagatgaaacatTTGGGGCC‑AAACTGTATATATCATAAATAAGTTACAAATTATGTCTCAAGCATaaaaa < 2:522585‑M1/58‑1 (MQ=255) taataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaa > 2:221412/1‑99 (MQ=255) taaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaa < 1:1466045‑M1/99‑59 (MQ=255) ctgcacagttttcccccaaaagatgaaacattTTGGGGCC‑ATGCTGTCCATATCATAATTAAGTTACGTAGTTTTTCTCAAGCATAAAAATATTaaaaa > 2:376943‑M1/33‑99 (MQ=255) ctgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa > 2:2569494‑M1/32‑99 (MQ=255) aaaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaa > 1:2956742‑M1/1‑40 (MQ=255) tgcacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGTATTAAAATATTAAAAAAc > 1:2818912‑M1/31‑99 (MQ=255) aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaata > 2:2139267‑M1/1‑39 (MQ=255) aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc > 2:2242318/1‑99 (MQ=255) aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc > 1:2708056/1‑99 (MQ=255) aGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaata > 1:747435‑M1/1‑38 (MQ=255) cacagttttcccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa > 2:1661427‑M1/29‑99 (MQ=255) acagttttcccccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa < 1:554607‑M1/71‑1 (MQ=255) tAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACa > 2:703661/1‑99 (MQ=255) aaaaaaaCAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa > 2:1514569/1‑99 (MQ=255) aaaaaaCAAATAAATACAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctat < 2:58429‑M1/99‑67 (MQ=255) aaaaaCAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctat > 1:1300618‑M1/1‑32 (MQ=255) aaCAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGc > 2:237107/1‑99 (MQ=255) cccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCa > 2:417739‑M1/20‑99 (MQ=255) ccccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCAt < 1:2400327‑M1/81‑1 (MQ=255) cAAATAAATACAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgtta > 2:1736334‑M1/1‑27 (MQ=255) cccaaaagatgaaacatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATc > 2:2149746‑M1/18‑99 (MQ=255) ccaaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATc < 2:2288503‑M1/82‑1 (MQ=255) aataaataCAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCt > 1:2637718/1‑99 (MQ=255) ataaataCAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTa > 1:1093178/1‑99 (MQ=255) aaaagatgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTa < 2:1251792‑M1/84‑1 (MQ=255) taaataCAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTaa < 1:2100873/99‑1 (MQ=255) aaataCAAGACAATTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatcttta > 1:1398177‑M1/1‑22 (MQ=255) aataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatcttta < 2:1296547‑M1/99‑79 (MQ=255) ataCAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagttaatttgttggcttaatattctattgttatctttat < 1:3016983‑M1/99‑80 (MQ=255) taCAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGt > 1:3034401/1‑99 (MQ=255) tgaaacattTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGtt > 2:2012560‑M1/10‑99 (MQ=255) cAAGACAATTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttattta > 2:346176‑M1/1‑17 (MQ=255) cAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt > 2:1570403/1‑99 (MQ=255) gACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGat < 1:1975261/99‑1 (MQ=255) gACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGat > 1:2002087/1‑99 (MQ=255) acatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAGAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGata < 1:1970201‑M1/95‑1 (MQ=255) acatTTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGata < 1:377626‑M1/95‑1 (MQ=255) aCAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGata > 2:1406815/1‑99 (MQ=255) attTTGGGGCC‑AAACTGTCCATATCAAAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGatat > 2:1323595‑M1/4‑99 (MQ=255) aTTGGGGCC‑tttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatttatagatgtt > 1:433516‑M1/1‑10 (MQ=255) aTTGGGGCC‑Attttgactcatagaggaaagcatcgcggacaaactttttcagtttatttgttggcttaatattctattgttatctttatttatagatgt > 1:905788‑M1/1‑10 (MQ=255) TTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTa < 1:2461688‑M1/99‑1 (MQ=255) | GGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCC‑AAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTA > NC_000913/4542584‑4542780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |