| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 71,214 | T→C | 78.6% | F276F (TTT→TTC) | araC → | DNA‑binding transcriptional dual regulator AraC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 71,214 | 0 | T | C | 78.6% | 1317.9 / inf | 579 | F276F (TTT→TTC) | araC | DNA‑binding transcriptional dual regulator AraC |
| Reads supporting (aligned to +/- strand): ref base T (66/58); new base C (225/230); total (291/288) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.78e-01 | |||||||||||
Only 100 of 587 total aligned reads displayed.
ATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAGGG > NC_000913/71116‑71311 | aTGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGttt < 1:913937/99‑1 (MQ=255) ccTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGt > 1:2748010/1‑99 (MQ=255) ccTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGt > 2:1676312/1‑99 (MQ=255) ccTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGt < 1:1812970/99‑1 (MQ=255) tATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGc < 1:370880/99‑1 (MQ=255) aTCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGcc < 2:1945839/99‑1 (MQ=255) cGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCgg < 1:2689393/99‑1 (MQ=255) gCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGt > 2:2210774/1‑99 (MQ=255) ccACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGtt < 1:3093993/99‑1 (MQ=255) ccACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGtt < 2:481565/99‑1 (MQ=255) aCCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTtgt < 2:1524498/99‑1 (MQ=255) cGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTga < 1:1253002/99‑1 (MQ=255) cggtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTgaaga < 1:1870964/99‑1 (MQ=255) ggtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTgaagaa > 1:3159143/1‑99 (MQ=255) gtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaa > 2:1581242/1‑99 (MQ=255) gtcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaa < 1:2947634/99‑1 (MQ=255) tcgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaa < 2:1833414/99‑1 (MQ=255) cgCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGaaaaa < 1:583710/99‑1 (MQ=255) gCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAg < 2:1994119/99‑1 (MQ=255) cAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGt < 2:1091074/99‑1 (MQ=255) cAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGt > 1:1692640/1‑99 (MQ=255) aaTGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTg > 2:628897/1‑99 (MQ=255) aaTGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTg > 1:1067031/1‑99 (MQ=255) tGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGaa > 2:760639/1‑99 (MQ=255) tGTTGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGaa > 1:1532550/1‑99 (MQ=255) ttGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatg < 2:2504672/99‑1 (MQ=255) ttGGTTTTGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAatg < 1:331065/99‑1 (MQ=255) gTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAatgatg > 1:1014556/1‑99 (MQ=255) gTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAatgatg < 2:1123141/99‑1 (MQ=255) ttttGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGt > 2:360212/1‑99 (MQ=255) ttttGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGt > 2:538017/1‑99 (MQ=255) tGACGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGc < 2:2295111/99‑1 (MQ=255) aCGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCg > 1:829815/1‑99 (MQ=255) aCGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCg > 1:2718050/1‑99 (MQ=255) aCGATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCg < 1:653368/99‑1 (MQ=255) aCGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCg > 2:2331790/1‑99 (MQ=255) gATCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTc < 2:1645538/99‑1 (MQ=255) aTCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCa > 2:135400/1‑99 (MQ=255) tCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCaa > 2:2079128/1‑99 (MQ=255) tCAACTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCaa > 2:2141203/1‑99 (MQ=255) aaCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGt < 1:2470167/99‑1 (MQ=255) aaCTCTATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGt > 2:1003074/1‑99 (MQ=255) tctATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGt > 1:3034355/1‑99 (MQ=255) tctATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGt < 2:2564802/99‑1 (MQ=255) tATTTCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCa < 2:3059321/99‑1 (MQ=255) tttCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATa < 1:1449262/99‑1 (MQ=255) ttCTCGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATaa < 2:933170/99‑1 (MQ=255) tctcGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAAt < 2:898352/99‑1 (MQ=255) ctcGCGGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAAtt > 2:729236/1‑99 (MQ=255) tcGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTg < 2:26484/99‑1 (MQ=255) tcGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTg > 1:2158101/1‑99 (MQ=255) cgcgGGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTgg < 2:3166080/99‑1 (MQ=255) gcgGGTATTTAAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTgg > 2:2421394/1‑99 (MQ=255) cgggTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTa > 1:2793703/4‑99 (MQ=255) gggTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTac < 2:1176840/97‑2 (MQ=255) gAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTaa > 2:1739875/1‑99 (MQ=255) ggTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTacc > 1:2231331/2‑97 (MQ=255) ggTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTacc > 1:2077779/2‑97 (MQ=255) gTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACg < 2:2602011/99‑1 (MQ=255) gTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTaccg > 1:171903/1‑96 (MQ=255) tATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGa > 2:2875082/1‑99 (MQ=255) aTTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGaa < 2:826575/99‑1 (MQ=255) ttt‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAAt > 1:733591/1‑99 (MQ=255) tt‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgct < 1:1613271‑M1/99‑4 (MQ=255) aaaaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaa > 1:951628‑M1/1‑92 (MQ=255) aaaaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaa < 1:1772698‑M1/99‑8 (MQ=255) aaaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaat < 2:1273334‑M1/99‑9 (MQ=255) aaaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaat < 2:1440583‑M1/99‑9 (MQ=255) aaTGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACaa > 2:1498231/1‑99 (MQ=255) aaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaatt < 1:1104674‑M1/99‑10 (MQ=255) aaTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaatt < 2:2693438‑M1/99‑10 (MQ=255) aTGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAAt < 1:321608/99‑1 (MQ=255) aTGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattc > 1:251442‑M1/1‑89 (MQ=255) tGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcg > 1:2556325‑M1/1‑88 (MQ=255) tGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcg > 1:2596408‑M1/1‑88 (MQ=255) tGCACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcg > 2:2831763‑M1/1‑88 (MQ=255) cACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGa < 1:3128884/99‑1 (MQ=255) cACCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgta < 1:1141756‑M1/99‑14 (MQ=255) aCCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGAc < 1:2295021/99‑1 (MQ=255) aCCGGGGCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaa < 2:2437391‑M1/99‑15 (MQ=255) ggggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatca < 1:2888160‑M1/99‑18 (MQ=255) ggggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatca > 1:638056‑M1/1‑82 (MQ=255) ggggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatca < 1:2015082‑M1/99‑18 (MQ=255) gggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcat > 2:1892640‑M1/1‑81 (MQ=255) gggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcat < 2:576898‑M1/99‑19 (MQ=255) ggCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatg < 1:1968717‑M1/99‑20 (MQ=255) gCCAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgt < 1:1898472‑M1/99‑21 (MQ=255) ccAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtc > 1:1387557‑M1/1‑78 (MQ=255) cAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGAc > 2:2769054/1‑99 (MQ=255) cAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtca < 2:298360‑M1/99‑23 (MQ=255) cAGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtca < 2:683180‑M1/99‑23 (MQ=255) aGCCCGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcat > 1:1325821‑M1/1‑76 (MQ=255) cccGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatag < 1:2656729‑M1/99‑26 (MQ=255) cccGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatag < 1:472785‑M1/99‑26 (MQ=255) ccGAGCGAGTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatagc > 2:1724043‑M1/1‑73 (MQ=255) cgagcgagTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatagct > 1:234028‑M1/1‑72 (MQ=255) gcgagTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatagctgtt < 2:1783853‑M1/99‑31 (MQ=255) agTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATa > 1:1482517/1‑99 (MQ=255) agTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatagctgtttcc > 1:1294323‑M1/1‑66 (MQ=255) gTTCCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTACCGAgctcgaattcgtaatcatgtcatagctgtttcct > 1:2420992‑M1/1‑65 (MQ=255) | ATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTT‑AAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAGGG > NC_000913/71116‑71311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |