Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp 100% [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 120 [0] [0] 116 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)92 (0.870) 66/174 NT 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 120 total aligned reads displayed.

GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATA  >  NC_000913/1397282‑1397478
                                                                                                  |                                                                                                  
ggTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC                                                                                                    >  1:1871741‑M1/1‑99 (MQ=255)
ggTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC                                                                                                    >  1:766989‑M1/1‑99 (MQ=255)
ggTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC                                                                                                    >  2:276359‑M1/1‑99 (MQ=255)
 gTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACa                                                                                                   >  2:2613329‑M1/1‑98 (MQ=255)
  ttttCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACac                                                                                                  >  1:100948‑M1/1‑97 (MQ=255)
  ttttCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACac                                                                                                  >  2:1795180‑M1/1‑97 (MQ=255)
   tttCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACact                                                                                                 <  2:1089005‑M1/99‑4 (MQ=255)
   tttCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACact                                                                                                 <  2:2241869‑M1/99‑4 (MQ=255)
     tCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttc                                                                                               >  1:2099257‑M1/1‑94 (MQ=255)
       agagCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcag                                                                                             >  2:1193264‑M1/1‑92 (MQ=255)
        gagCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcaga                                                                                            >  2:2211176‑M1/1‑91 (MQ=255)
         agCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaa                                                                                           >  2:2719654‑M1/1‑90 (MQ=255)
          gCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaac                                                                                          <  1:347759‑M1/99‑11 (MQ=255)
          gCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaac                                                                                          >  2:2460102‑M1/1‑89 (MQ=255)
          gCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaac                                                                                          <  2:1449726‑M1/99‑11 (MQ=255)
               cAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg                                                                                     <  1:1317025‑M1/99‑16 (MQ=255)
                aaCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtggg                                                                                    <  2:1381293‑M1/99‑17 (MQ=255)
                aaCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtggg                                                                                    <  1:1490418‑M1/99‑17 (MQ=255)
                 aCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggt                                                                                   >  1:1754562‑M1/1‑82 (MQ=255)
                  cGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtg                                                                                  >  2:2445751‑M1/1‑81 (MQ=255)
                   ggTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtga                                                                                 >  1:963886‑M1/1‑80 (MQ=255)
                    gTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTAAGGCGAAACacttcagaaccgtgggtgat                                                                                <  1:2560338‑M1/99‑21 (MQ=255)
                       aaaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcc                                                                             >  2:1019085‑M1/1‑76 (MQ=255)
                       aaaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcc                                                                             >  1:1023552‑M1/1‑76 (MQ=255)
                        aaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcct                                                                            <  2:356816‑M1/99‑25 (MQ=255)
                        aaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcct                                                                            <  2:921886‑M1/99‑25 (MQ=255)
                           gTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttg                                                                         >  1:2583211‑M1/1‑72 (MQ=255)
                            tCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttga                                                                        >  2:1586953‑M1/1‑71 (MQ=255)
                            tCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttga                                                                        >  1:1660413‑M1/1‑71 (MQ=255)
                               tGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaat                                                                     >  2:410119‑M1/1‑68 (MQ=255)
                                  tATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcga                                                                  >  1:1662351‑M1/1‑65 (MQ=255)
                                   aTTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaa                                                                 <  1:552396‑M1/99‑36 (MQ=255)
                                        tACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggt                                                            >  2:1452211‑M1/1‑59 (MQ=255)
                                        tACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggt                                                            >  2:857792‑M1/1‑59 (MQ=255)
                                          cGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAATCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttg                                                          <  2:2186360‑M1/99‑43 (MQ=255)
                                          cGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttg                                                          >  2:2553273‑M1/1‑57 (MQ=255)
                                            tttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggt                                                        >  1:2613629‑M1/1‑55 (MQ=255)
                                            tttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggt                                                        >  1:1303545‑M1/1‑55 (MQ=255)
                                            tttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggt                                                        <  1:1381653‑M1/99‑45 (MQ=255)
                                              tAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtat                                                      <  2:1256097‑M1/99‑47 (MQ=255)
                                              tAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtat                                                      <  1:49803‑M1/99‑47 (MQ=255)
                                                 gTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgc                                                   >  1:1327110‑M1/1‑50 (MQ=255)
                                                  tAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgca                                                  <  2:1191773‑M1/99‑51 (MQ=255)
                                                   aaCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcac                                                 >  1:2749564‑M1/1‑48 (MQ=255)
                                                   aaCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcac                                                 >  2:1584233‑M1/1‑48 (MQ=255)
                                                      aaGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacaga                                              <  2:1468388‑M1/99‑55 (MQ=255)
                                                       aGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagat                                             >  1:1681051‑M1/1‑44 (MQ=255)
                                                        gtaattTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatg                                            <  1:853888‑M1/97‑57 (MQ=255)
                                                        gAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatg                                            <  2:2558916‑M1/99‑57 (MQ=255)
                                                          aaTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcg                                          >  2:1274515‑M1/1‑41 (MQ=255)
                                                           aTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcga                                         >  1:2281379‑M1/1‑40 (MQ=255)
                                                           aTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcga                                         <  2:215576‑M1/99‑60 (MQ=255)
                                                           aTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcga                                         <  2:2446762‑M1/99‑60 (MQ=255)
                                                            tttGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgac                                        >  2:2615401‑M1/1‑39 (MQ=255)
                                                             ttGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacg                                       >  1:812100‑M1/1‑38 (MQ=255)
                                                                tCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggca                                    <  1:124267‑M1/99‑65 (MQ=255)
                                                                    cacaAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccac                                <  1:2136571‑M1/99‑69 (MQ=255)
                                                                      caAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacat                              >  1:2188034‑M1/1‑29 (MQ=255)
                                                                        aGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc                            <  2:1339666‑M1/99‑73 (MQ=255)
                                                                        aGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc                            >  1:163643‑M1/1‑27 (MQ=255)
                                                                        aGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc                            <  2:1758002‑M1/99‑73 (MQ=255)
                                                                          gATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctg                          >  2:1443762‑M1/1‑25 (MQ=255)
                                                                          gATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctg                          >  1:2134391‑M1/1‑25 (MQ=255)
                                                                          gATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctg                          >  1:1997832‑M1/1‑25 (MQ=255)
                                                                          gATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattccg                          >  1:756035‑M1/1‑25 (MQ=255)
                                                                            ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca                        >  2:835123‑M1/1‑23 (MQ=255)
                                                                            ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca                        >  1:1383793‑M1/1‑23 (MQ=255)
                                                                            ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgca                        <  1:1377377‑M1/99‑77 (MQ=255)
                                                                             tACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcat                       >  2:84585‑M1/1‑22 (MQ=255)
                                                                             tACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcat                       <  1:1856803‑M1/99‑78 (MQ=255)
                                                                               catcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcg                     <  2:1956167‑M1/99‑80 (MQ=255)
                                                                               catcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcg                     <  1:2268566‑M1/99‑80 (MQ=255)
                                                                                atcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgc                    <  1:2061588‑M1/99‑81 (MQ=255)
                                                                                  catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc                  <  2:1536943‑M1/99‑83 (MQ=255)
                                                                                  catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc                  <  2:1062090‑M1/99‑83 (MQ=255)
                                                                                  catGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc                  >  1:1073522‑M1/1‑17 (MQ=255)
                                                                                    tGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctg                >  1:1971163‑M1/1‑15 (MQ=255)
                                                                                      aTTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaa              <  2:2143015‑M1/99‑87 (MQ=255)
                                                                                        tATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaaca            >  2:601421‑M1/1‑11 (MQ=255)
                                                                                         aTGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacat           <  1:1009289‑M1/99‑90 (MQ=255)
                                                                                         aTGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacat           <  1:956475‑M1/99‑90 (MQ=255)
                                                                                           ggCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcg         <  1:1812073‑M1/99‑92 (MQ=255)
                                                                                            gCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgt        >  1:1499190‑M1/1‑7 (MQ=255)
                                                                                            gCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgt        >  2:1347638‑M1/1‑7 (MQ=255)
                                                                                             cGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtc       <  1:845307‑M1/99‑94 (MQ=255)
                                                                                             cGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtc       >  2:329688‑M1/1‑6 (MQ=255)
                                                                                              gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct      <  2:1188302‑M1/99‑95 (MQ=255)
                                                                                              gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct      <  1:1302903‑M1/99‑95 (MQ=255)
                                                                                              gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct      <  1:1046606‑M1/99‑95 (MQ=255)
                                                                                               aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc     >  1:1688118‑M1/1‑4 (MQ=255)
                                                                                               aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc     <  1:1761517‑M1/99‑96 (MQ=255)
                                                                                                aaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcg    >  2:2355695‑M1/1‑3 (MQ=255)
                                                                                                aaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcg    >  1:2432614‑M1/1‑3 (MQ=255)
                                                                                                 acacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcga   >  1:2070291‑M1/1‑2 (MQ=255)
                                                                                                 acacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcga   <  2:1308561‑M1/99‑98 (MQ=255)
                                                                                                 acacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcga   <  2:1363588‑M1/99‑98 (MQ=255)
                                                                                                 acacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcga   <  2:2434446‑M1/99‑98 (MQ=255)
                                                                                                  cacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgat  <  2:300962‑M1/99‑99 (MQ=255)
                                                                                                  cacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgat  >  1:2707049‑M1/1‑1 (MQ=255)
                                                                                                  cacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgat  >  1:259204‑M1/1‑1 (MQ=255)
                                                                                                  |                                                                                                  
GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATA  >  NC_000913/1397282‑1397478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: