| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,535,126 | G→A | 100% | P248L (CCG→CTG) | envZ ← | sensory histidine kinase EnvZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,535,126 | 0 | G | A | 100.0% | 513.3 / NA | 120 | P248L (CCG→CTG) | envZ | sensory histidine kinase EnvZ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (69/51); total (69/51) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 124 total aligned reads displayed.
ATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTA > NC_000913/3535030‑3535221 | tgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAgcagcg < 1:2996785/99‑1 (MQ=255) tgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAgcagcg > 2:942735/1‑99 (MQ=255) ggCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGt < 1:2401097/99‑1 (MQ=255) ggCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGt < 1:1140347/99‑1 (MQ=255) ggCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGt > 1:1378491/1‑99 (MQ=255) ggCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGt < 1:1025329/99‑1 (MQ=255) gagTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGACAGCAGCGTg > 2:1291995/3‑99 (MQ=255) gCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTg > 1:2198369/1‑99 (MQ=255) gCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCaa > 2:2646978/1‑99 (MQ=255) gCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCaa > 1:2979881/1‑99 (MQ=255) gCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCAACTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCaa < 2:3767025/99‑1 (MQ=255) cACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAg > 2:1199413/1‑99 (MQ=255) aCTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGt > 2:1440359/1‑99 (MQ=255) aCTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGt < 1:1903166/99‑1 (MQ=255) ctctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTc < 2:346388/99‑1 (MQ=255) ctctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTc > 2:3814034/1‑99 (MQ=255) tctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCg > 1:1105006/1‑99 (MQ=255) tctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCg > 1:23583/1‑99 (MQ=255) ctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGt < 1:260303/99‑1 (MQ=255) ctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGt > 2:3748585/1‑99 (MQ=255) ttCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTg > 2:2877878/1‑99 (MQ=255) tCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGa < 2:2413119/99‑1 (MQ=255) cGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGAc < 1:3887930/99‑1 (MQ=255) atatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACtt > 2:2914446/1‑99 (MQ=255) atatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACtt > 2:3181626/1‑99 (MQ=255) atatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACtt > 1:2681806/1‑99 (MQ=255) tatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTa > 2:2592196/1‑99 (MQ=255) tatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTa < 2:1355215/99‑1 (MQ=255) tatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTa < 1:1195466/99‑1 (MQ=255) tatCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTa > 1:3087871/1‑99 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTAc > 2:3217404/1‑99 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTAc > 1:3045619/1‑99 (MQ=255) tCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTAcc > 2:153104/1‑99 (MQ=255) tttATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTAcccc < 1:2968191/99‑1 (MQ=255) tttATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTAcccc > 1:502238/1‑99 (MQ=255) ttGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGcc > 2:423987/1‑99 (MQ=255) gATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCAt > 1:1040487/1‑99 (MQ=255) aTCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATc > 2:734856/1‑99 (MQ=255) tCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATca > 2:2063833/1‑99 (MQ=255) cGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcag < 1:2181183/99‑1 (MQ=255) cGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcag < 1:3741588/99‑1 (MQ=255) gATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagc > 1:3345970/1‑99 (MQ=255) gATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagc < 1:1588892/99‑1 (MQ=255) aTTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagca > 2:529435/1‑99 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag > 1:3030715/1‑99 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag > 1:1459482/1‑99 (MQ=255) ttCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATcagcag > 2:1866805/1‑99 (MQ=255) tGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGt > 2:669386/1‑99 (MQ=255) tGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGt < 2:77884/99‑1 (MQ=255) tGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGt > 2:3879799/1‑99 (MQ=255) ccAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGc > 1:1858611/1‑99 (MQ=255) aGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCgg < 1:2512892/99‑1 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt > 1:2961796/1‑99 (MQ=255) gATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGt < 1:833607/99‑1 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 1:896193/1‑99 (MQ=255) tAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCa > 1:3493307/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc < 2:120566/99‑1 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc > 2:3273368/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc > 2:3059401/1‑99 (MQ=255) gCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATc < 1:1429497/99‑1 (MQ=255) tCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGcc > 1:1818531/1‑99 (MQ=255) tGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGt < 2:1364768/99‑1 (MQ=255) tGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGt > 2:1466816/1‑99 (MQ=255) gctcgctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGtt > 1:667207/1‑99 (MQ=255) ctcgctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTg > 2:1756479/1‑99 (MQ=255) tcgctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGc < 2:2528260/99‑1 (MQ=255) tcgctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGc < 2:2315326/99‑1 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa > 1:1756968/1‑99 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa > 1:807893/1‑99 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa < 2:264892/99‑1 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa < 2:1431197/99‑1 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa < 1:1359688/99‑1 (MQ=255) tcatcaTCTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTaa > 1:1876843/1‑99 (MQ=255) atcatcTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAaca < 1:1319542/99‑1 (MQ=255) atcatcTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAaca > 2:3618036/1‑99 (MQ=255) catcTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAcc > 2:2767867/1‑99 (MQ=255) catcTCAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAcc < 1:1236998/99‑1 (MQ=255) ctcAGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgc < 1:2413919/99‑1 (MQ=255) aGTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgccgc > 2:1261563/1‑99 (MQ=255) gTCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAgccgcc > 2:3530664/1‑99 (MQ=255) tCGCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCa < 2:2681806/99‑1 (MQ=255) tCGCCAGGCGAATACGCGTCAGCAGCCTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCa < 2:1195276/99‑1 (MQ=255) gCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCata < 1:2344654/99‑1 (MQ=255) gCCAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCata < 1:3394673/99‑1 (MQ=255) cAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATg < 1:1983900/99‑1 (MQ=255) cAGGCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATg > 2:736420/1‑99 (MQ=255) ggCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGt > 1:2557061/1‑99 (MQ=255) ggCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGt < 1:1615792/99‑1 (MQ=255) ggCGAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGt < 2:1379885/99‑1 (MQ=255) gAATACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTaa > 2:810103/1‑99 (MQ=255) aaTACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTaaa < 2:2146891/99‑1 (MQ=255) aaTACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTaaa > 2:869804/1‑99 (MQ=255) aTACGCGTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAg < 1:66636/99‑1 (MQ=255) cgcgTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCa < 1:3396944/99‑1 (MQ=255) cgcgTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCa > 1:468376/1‑99 (MQ=255) cgcgTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCa < 2:952205/99‑1 (MQ=255) gTCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACgg > 1:2678046/1‑99 (MQ=255) tCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACggg > 2:2704678/1‑99 (MQ=255) tCAGCAGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACggg < 1:353566/99‑1 (MQ=255) agcagcGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTa > 2:2966935/1‑99 (MQ=255) | ATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTA > NC_000913/3535030‑3535221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |