| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 4,542,237 | IS1 (+) +9 bp | 61.3% | coding (201‑209/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 92 (0.800) | 66/176 | NT | 60.4% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542245 | 54 (0.520) | coding (209/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 79 (0.690) | 60/176 | NT | 56.7% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542237 = | 54 (0.520) | coding (201/597 nt) | fimE | regulator for fimA | |||||
Only 100 of 106 total aligned reads displayed.
AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583524‑3583428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCATG < NC_000913/4542245‑4542148 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 1:2959335/1‑99AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:1613527/1‑99 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA > 2:2130341/1‑99 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA > 1:1867682/1‑99 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA < 2:1410816/99‑1 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA < 1:2963031/99‑1 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAAT > 1:1077891/1‑99 CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATC < 1:2084774/99‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGT < 2:874497/99‑1 ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTT < 2:792278/99‑1 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTC > 2:2543910/1‑99 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTC < 2:1210951/99‑1 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTC < 1:13904/99‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTT > 2:2165282/1‑99 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTT > 2:733932/1‑99 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGT > 2:1722470/1‑99 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGT < 1:1646786/99‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGT < 2:1472608/99‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGT < 2:826274/99‑1 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTC > 1:1281144/1‑99 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTC > 1:1807580/1‑99 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGG > 2:1457915/1‑99 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGC < 2:67960/99‑1 CTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGGATCACCGAAAATCCGTTCTTCAGTCGGCGA > 2:1605202/1‑99 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAA < 1:93197/99‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAA < 1:2232149/99‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAA < 2:2293288/99‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAA > 1:1632272/1‑99 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATA < 1:123067/99‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATA > 2:2861817/1‑99 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATA < 1:1307206/99‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATAT < 2:1205057/99‑1 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATT < 2:1916471/99‑1 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTAT > 2:2028205/1‑99 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTC < 2:2535721/99‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTC < 1:1241105/99‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTC < 1:429901/99‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTA > 2:2278654/1‑99 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCT < 2:319609/99‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCT < 2:1133006/99‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTT < 1:2404380/99‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCAT < 1:1337604/99‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCAT > 1:2403404/1‑99 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCAT > 2:1410437/1‑99 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATT > 2:753552/1‑99 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATT > 1:1039023/1‑99 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTA > 1:264271/1‑99 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAA > 1:889933/1‑99 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAG < 1:1306343/99‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAG < 2:1944647/99‑1 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGG > 1:2595762/1‑99 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGT < 2:1689933/99‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGT < 1:1983535/99‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAAGCCGTTCGTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGT < 2:671390/99‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAA > 2:1126737/1‑99 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAG > 2:730976/1‑99 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGG > 2:2411690/1‑99 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGT < 1:1049230/99‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTC > 2:1803789/1‑99 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTC > 1:1117490/1‑99 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCC > 2:902190/1‑99 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTG > 2:1810552/1‑99 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATA < 1:2608096/99‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAAT > 1:416881/1‑99 TCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATG < 1:1401530/99‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGC < 1:2720389/99‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCA > 1:731326/1‑99 ATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCA < 2:2758965/99‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAG > 2:2637603/1‑99 TACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAG > 1:1532188/1‑99 ACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGA > 2:1022541/1‑99 ACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGA > 1:1261147/1‑99 CACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGAT > 1:2047834/1‑99 ACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATC < 1:543930/99‑1 ACTAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATC < 1:1138874/99‑1 TAAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAA > 1:716064/1‑99 AAATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAG < 2:164992/99‑1 AATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGC > 2:309324/1‑99 ATCAGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCA > 1:394386/1‑99 TCAGTCAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAG < 2:627707/99‑1 AGTAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTT < 2:75525/99‑1 TAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCA < 2:1391603/99‑1 TAAGTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCA > 1:316076/1‑99 GTTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTA > 1:679196/1‑99 TTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAA > 2:797263/1‑99 TTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAA < 2:1095586/99‑1 TTGGCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAA < 2:1927703/99‑1 GGCAGCATCACCGAAAATACGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAGGGTAAAGGTCCTGATAATGCAGTTCAAGCAGTTGACTAATA > 2:761807/1‑99 GCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATAC < 2:2569138/99‑1 GCAGCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATAC > 1:2421702/1‑99 GCATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCA > 1:1382006/1‑99 ATCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATC < 1:2530118/99‑1 TCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCC > 2:2158844/1‑99 TCACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCC > 1:485493/1‑99 CACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCC > 1:2649781/1‑99 ACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCA < 2:1038025/99‑1 ACCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCA < 1:2154678/99‑1 CCGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCAT > 1:1047991/1‑99 CGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCATG < 2:3023465/99‑1 CGAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCATG < 2:2333498/99‑1 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583524‑3583428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAATCCGTTCTTCAGTCGGCGAATATTTATTCTACCTTCATTAAGGTCAAGGTCCTGATAATGCAGATCAAGCAGTTCACTAATACGCATCCCATG < NC_000913/4542245‑4542148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |