| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 4,542,020 | IS5 (–) +4 bp | 65.7% | intergenic (+461/‑14) | fimB → / → fimE | regulator for fimA/regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 66 (0.580) | 51/174 | NT | 61.7% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4542023 | 39 (0.360) | intergenic (+464/‑14) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 87 (0.750) | 64/176 | NT | 66.9% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4542020 = | 41 (0.370) | intergenic (+461/‑17) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
Only 100 of 258 total aligned reads displayed.
GCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATT > NC_000913/4541926‑4542121 | tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgg > 1:1262326‑M2/95‑99 (MQ=255) cacaTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGgga < 1:1102264‑M2/99‑4 (MQ=255) cacaTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGgga < 1:1231409‑M2/99‑4 (MQ=255) caTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGta < 1:2441644/99‑1 (MQ=255) caTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGta < 2:3048617/99‑1 (MQ=255) aTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGtac < 2:1981662/99‑1 (MQ=255) cACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtg > 1:2075608‑M2/1‑91 (MQ=255) cACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGtacta < 1:2805923/99‑1 (MQ=255) tCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTActacta < 2:476904/99‑1 (MQ=255) ccGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaa > 2:585472‑M2/1‑87 (MQ=255) gtgtgtGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaata < 1:1793157‑M2/99‑15 (MQ=255) ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATtgt > 1:22328‑M2/81‑99 (MQ=255) tgtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATtgt > 1:2852122/1‑99 (MQ=255) gtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATtgtg > 1:767253/1‑99 (MQ=255) gTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcgggg < 1:2007075‑M2/99‑22 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAAc < 1:1651768‑M2/27‑1 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAAc > 1:884330‑M2/73‑99 (MQ=255) tCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaat > 1:1416757‑M2/1‑74 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAAcgtcgt < 1:347693‑M2/32‑1 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTAt < 1:2530362‑M2/35‑1 (MQ=255) aTCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATc < 2:610996/99‑1 (MQ=255) tCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcg < 2:2924800‑M2/99‑34 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCt < 1:953135‑M2/37‑1 (MQ=255) cTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCtt < 1:57567/99‑1 (MQ=255) tATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggc < 2:2105031‑M2/99‑36 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTa < 1:1242101‑M2/39‑1 (MQ=255) ttGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctg < 2:303151‑M2/99‑38 (MQ=255) tGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctga < 1:1025508‑M2/99‑39 (MQ=255) tGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctga > 2:2124144‑M2/1‑61 (MQ=255) gggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgac > 2:1205010‑M2/1‑60 (MQ=255) ggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact < 1:1320123‑M2/99‑41 (MQ=255) ggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGt < 2:1070065/99‑1 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGt > 2:1380037‑M2/56‑99 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGt < 1:1393946‑M2/44‑1 (MQ=255) cTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTaa > 1:446691/1‑99 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTaaa > 2:2838031‑M2/53‑99 (MQ=255) tAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag < 1:211692‑M2/99‑44 (MQ=255) tAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag > 1:1622793‑M2/1‑56 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAaaga > 1:2402663‑M2/51‑99 (MQ=255) ttttGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 2:670199‑M2/99‑47 (MQ=255) ttttGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAaagaa > 2:2569903/1‑99 (MQ=255) tttGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAaagaag < 2:21753/99‑1 (MQ=255) tttGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAaagaag > 1:2695795/1‑99 (MQ=255) ttGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGt < 1:565480/99‑1 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGt < 2:2064070‑M2/52‑1 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGtt > 2:1368792‑M2/47‑99 (MQ=255) aCCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCa < 1:2535680/99‑1 (MQ=255) aTTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGcc > 1:488912/1‑99 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatga < 1:271167‑M2/63‑1 (MQ=255) gTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg > 1:1576117‑M2/1‑38 (MQ=255) atgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatgatg > 1:2325895‑M2/35‑99 (MQ=255) atgatctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatgatg < 2:1872132‑M2/65‑1 (MQ=255) tttCCTATAGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt > 2:1488544‑M2/1‑37 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGc > 1:1720435‑M2/30‑99 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCg > 2:580006‑M2/29‑99 (MQ=255) taGGTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc < 1:1948522‑M2/99‑70 (MQ=255) atatcagggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGt > 1:53442‑M2/27‑99 (MQ=255) gTATTCATTCAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat > 1:2922509‑M2/1‑27 (MQ=255) attcattcAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt < 1:2768161‑M2/99‑75 (MQ=255) attcattcAAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt < 2:3004429‑M2/99‑75 (MQ=255) attcattcAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGtt < 2:169322/99‑1 (MQ=255) ttcattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTa < 2:428325/99‑1 (MQ=255) gggacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTa > 1:1351019‑M2/21‑99 (MQ=255) tcattcaAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt > 1:2950338‑M2/1‑23 (MQ=255) gacttgttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACg > 2:744743‑M2/19‑99 (MQ=255) cattcaAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 2:903298‑M2/99‑78 (MQ=255) ttcaAATATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 2:1565760‑M2/99‑80 (MQ=255) ttcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCaa > 1:1542002‑M2/13‑99 (MQ=255) aaTATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 1:186172‑M2/1‑16 (MQ=255) aaTATATCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 2:752053‑M2/99‑84 (MQ=255) tcgcaccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAAc < 1:246679‑M2/88‑1 (MQ=255) tatatCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACg > 2:2955562/1‑99 (MQ=255) tatCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 2:2742907‑M2/99‑88 (MQ=255) tatCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 2:2339269‑M2/99‑88 (MQ=255) tatCTCAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 2:1292106‑M2/99‑88 (MQ=255) accttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGa > 2:712801‑M2/8‑99 (MQ=255) tctcAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg > 2:2252422‑M2/1‑10 (MQ=255) ccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAg < 2:2784653‑M2/93‑1 (MQ=255) ccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAg < 2:1348620‑M2/93‑1 (MQ=255) ccttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAg < 1:822483‑M2/93‑1 (MQ=255) ctcAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGc < 2:1756564/99‑1 (MQ=255) ttccTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGcc > 2:1962166‑M2/5‑99 (MQ=255) tcAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc < 1:1495407‑M2/99‑92 (MQ=255) aGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt > 2:842263‑M2/1‑6 (MQ=255) cTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCaga < 2:1085683‑M2/98‑1 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga < 2:2601340‑M2/99‑96 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga < 2:2526040‑M2/99‑96 (MQ=255) ttAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCagag < 2:2466697/99‑1 (MQ=255) ttAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCagag > 1:636377/1‑99 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 1:1008744‑M2/1‑3 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 2:1851211‑M2/1‑3 (MQ=255) tAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAgaga < 1:2200954/99‑1 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:319987‑M2/99‑98 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 2:160262‑M2/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 2:91968‑M2/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatatcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:3010366‑M2/99‑98 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 2:513162‑M2/99‑99 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 1:1885457‑M2/99‑99 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 1:2348705‑M2/99‑99 (MQ=255) ggAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGatt > 1:2661755/1‑99 (MQ=255) | GCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATT > NC_000913/4541926‑4542121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |