| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 4,542,223 | IS1 (–) +9 bp | 60.7% | coding (187‑195/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 55 (0.580) | 49/176 | NT | 57.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542223 = | 36 (0.420) | coding (187/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 56 (0.590) | 46/176 | NT | 58.2% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542231 | 36 (0.420) | coding (195/597 nt) | fimE | regulator for fimA | |||||
Only 100 of 175 total aligned reads displayed.
CTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCG > NC_000913/4542133‑4542329 | cTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTg < 2:1720916/99‑1 (MQ=255) gTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTgaa < 2:2328834/99‑1 (MQ=255) gTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGgg > 1:2117848‑M2/1‑97 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTgaa < 2:1881205‑M2/11‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTgaa > 1:76167‑M2/89‑99 (MQ=255) ttGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggt > 2:698380‑M2/1‑96 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTgaag > 1:739245‑M2/88‑99 (MQ=255) tcagggacttgttcgcaccttccTTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTgaagaa < 1:2246107‑M2/76‑1 (MQ=255) gCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAACTATTCGCCGACTGAAGAAc < 2:313892/99‑1 (MQ=255) gCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaat > 1:162121‑M2/1‑93 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACgg < 2:1368343‑M2/17‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccgtcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGAt < 2:75496‑M2/19‑1 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGAttt > 2:2248847‑M2/79‑99 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGAtttt < 2:279069‑M2/22‑1 (MQ=255) tgttcgcaccttccTTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTc > 1:1875899‑M2/15‑99 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTc < 1:633368‑M2/23‑1 (MQ=255) cATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAACTATTCGCCGACTGAAGAACGGATTTTCt < 2:725856/99‑1 (MQ=255) cATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaac > 2:1693366‑M2/1‑84 (MQ=255) cATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCt > 1:1944505/1‑99 (MQ=255) aTGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaact > 2:284318‑M2/1‑83 (MQ=255) tGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaactt < 1:1158260‑M2/99‑18 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTAc > 1:2174812‑M2/74‑99 (MQ=255) gggATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaactta > 2:405300‑M2/1‑81 (MQ=255) tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCg > 1:1362338‑M2/72‑99 (MQ=255) tGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattga > 2:215674‑M2/1‑77 (MQ=255) tGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattga < 1:282419‑M2/99‑23 (MQ=255) gCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCa < 2:637161/99‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCAc > 1:1515663‑M2/67‑99 (MQ=255) gTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatag < 2:1812186‑M2/99‑26 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCg > 1:2199229‑M2/64‑99 (MQ=255) ttAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgt > 1:2018093‑M2/1‑71 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGt < 2:934330‑M2/37‑1 (MQ=255) aaCTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatg < 2:1057966‑M2/99‑35 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGttt < 2:1600052‑M2/44‑1 (MQ=255) aCTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGttt > 2:506198/1‑99 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGtttt > 2:2108904‑M2/55‑99 (MQ=255) gCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTtga > 2:1275397/1‑99 (MQ=255) ttGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcaga > 2:1666686‑M2/1‑59 (MQ=255) tGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagat > 2:1210384‑M2/1‑58 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAg < 1:2092354‑M2/51‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAg < 1:304787‑M2/51‑1 (MQ=255) tCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCg > 1:301262/1‑99 (MQ=255) tCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCg < 1:1836101/99‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGt > 1:530368‑M2/46‑99 (MQ=255) tGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTg < 2:1620090/99‑1 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGa > 1:23233‑M2/44‑99 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGa > 1:561590‑M2/44‑99 (MQ=255) cATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgccc < 2:2482968‑M2/99‑49 (MQ=255) aTTATCAGGACCTTGACCTTAATGAAGGTAGAATAACTATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAg < 1:100852/99‑1 (MQ=255) cgagaccttgaccttaatGGAGGTAGAATAAATTCTTCCCGAATAggtaatgactccaacttattgatagtgttttatgtgcagataatgcccgatgac > 2:1336215‑M2/4‑45 (MQ=255) ggACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGa > 2:2415900/1‑99 (MQ=255) gaccttgacctcAATGAAGGTAGACTGAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGaa > 2:2272390/1‑99 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGaa < 2:1688275‑M2/66‑1 (MQ=255) accttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg < 1:475336‑M2/99‑59 (MQ=255) ccttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:1454363‑M2/1‑40 (MQ=255) ttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca > 2:1835786‑M2/1‑38 (MQ=255) ttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCt < 1:1730935/99‑1 (MQ=255) gaccttAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg < 2:746493‑M2/99‑64 (MQ=255) accttAATGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 2:1013228‑M2/99‑65 (MQ=255) ttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAccc > 1:1306077/1‑99 (MQ=255) atcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAccc < 1:1648383‑M2/76‑1 (MQ=255) atcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAccc > 2:1955104‑M2/24‑99 (MQ=255) tcagtaagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCa > 2:1140311‑M2/23‑99 (MQ=255) aaTGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc > 1:1964818‑M2/1‑30 (MQ=255) tGAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca < 2:130325‑M2/99‑72 (MQ=255) taagttggcagcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGaa > 1:1843133‑M2/19‑99 (MQ=255) gAAGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac < 1:1420019‑M2/99‑73 (MQ=255) aaGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc < 2:68797‑M2/99‑74 (MQ=255) aaGGTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc > 2:863691‑M2/1‑26 (MQ=255) aGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACg > 2:2042856/1‑99 (MQ=255) ggTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga < 2:1659445‑M2/99‑76 (MQ=255) ggTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 2:1231918‑M2/1‑24 (MQ=255) gTAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat < 1:1913322‑M2/99‑77 (MQ=255) tAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:2510714‑M2/1‑22 (MQ=255) tAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 2:2229521‑M2/1‑22 (MQ=255) tAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt < 1:464800‑M2/99‑78 (MQ=255) tAGAATAAATATTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:671070‑M2/1‑22 (MQ=255) tAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGc > 1:1699070/1‑99 (MQ=255) gAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTa > 2:196526/1‑99 (MQ=255) agcatcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAAc < 2:352421‑M2/90‑1 (MQ=255) aaataTTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga > 1:746557‑M2/1‑16 (MQ=255) atcaccCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTgg > 2:333952‑M2/7‑99 (MQ=255) aataTTCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa < 1:1060028‑M2/99‑85 (MQ=255) ttCGCCGACTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac < 1:435871‑M2/99‑89 (MQ=255) ttCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAg > 2:1850734/1‑99 (MQ=255) ttCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAg > 1:1801085/1‑99 (MQ=255) tCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAgg < 2:27072/99‑1 (MQ=255) cGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGgc < 2:457482/99‑1 (MQ=255) ccGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGgcgc < 2:2470820/99‑1 (MQ=255) cGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCt < 2:778985/99‑1 (MQ=255) gACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTg > 1:2285936/1‑99 (MQ=255) aCTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGTAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGa > 1:1866155/1‑99 (MQ=255) aCTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGa < 1:237917/99‑1 (MQ=255) aCTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGa < 1:807420/99‑1 (MQ=255) cTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAc > 1:1904710/1‑99 (MQ=255) tGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc < 2:1908423‑M2/99‑98 (MQ=255) tGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAcc > 1:934923/1‑99 (MQ=255) tGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAcc > 2:2335686/1‑99 (MQ=255) gaagaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCg < 2:1003249/99‑1 (MQ=255) gaagaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCg > 2:251961/1‑99 (MQ=255) | CTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCG > NC_000913/4542133‑4542329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |