BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3186096 =	NA (NA)	13 (0.090)	11/176	NT	6.9%	noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	4542114 =	165 (1.170)	13 (0.090)	11/176	NT	6.9%	coding (78/597 nt)	fimE	regulator for fimA

Only 100 of 218 total aligned reads displayed.

TCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAG  >  NC_000913/4542016‑4542212

caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctac                                                                                                    <  1:549950‑M2/1‑1 (MQ=255)

 aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCa                                                                                                   >  1:3637564‑M2/98‑99 (MQ=255)

  aGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCag                                                                                                  >  2:3655086/1‑99 (MQ=255)

     TAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAgaga                                                                                               <  1:3815786‑M2/99‑1 (MQ=255)

     TAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAgaga                                                                                               <  2:1046845‑M2/99‑1 (MQ=255)

     TAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAgaga                                                                                               <  2:2559107‑M2/99‑1 (MQ=255)

      AGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGAt                                                                                              <  1:3774911‑M2/99‑1 (MQ=255)

      AGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGAt                                                                                              >  1:1377487‑M2/1‑99 (MQ=255)

      AGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGAt                                                                                              >  2:3854830‑M2/1‑99 (MQ=255)

        gAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGatta                                                                                            <  2:3671951/99‑1 (MQ=255)

        gAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGatta                                                                                            >  2:436308/1‑99 (MQ=255)

           tactacTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTg                                                                                         <  1:437464/99‑1 (MQ=255)

              tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCt                                                                                      <  1:1959542/99‑1 (MQ=255)

                ctaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTa                                                                                    >  2:231448/1‑99 (MQ=255)

                ctaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGAGCAACGGGAGCCAGAGATTATTGTCTTa                                                                                    <  2:351839/99‑1 (MQ=255)

                 taTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTAt                                                                                   >  2:833895/1‑99 (MQ=255)

                  aTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTAtt                                                                                  <  2:467839/99‑1 (MQ=255)

                  aTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTAtt                                                                                  <  1:155207/99‑1 (MQ=255)

                   ttGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTc                                                                                 >  1:3400768/1‑99 (MQ=255)

                    tgtgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCt                                                                                <  2:738395/99‑1 (MQ=255)

                    actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGATTATTGTCTTATTCt                                                                                >  2:1327187‑M2/79‑99 (MQ=255)

                     ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGATTATTGTCTTATTCTg                                                                               >  2:861995‑M2/78‑99 (MQ=255)

                      tgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGt                                                                              <  1:499822/99‑1 (MQ=255)

                      tgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGt                                                                              <  2:2655171/99‑1 (MQ=255)

                       gAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGtt                                                                             <  1:2689352/99‑1 (MQ=255)

                        aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTg                                                                            <  2:37859/99‑1 (MQ=255)

                         gTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTgg                                                                           <  1:1046967/99‑1 (MQ=255)

                         gTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTgg                                                                           <  2:2408527/99‑1 (MQ=255)

                          tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGc                                                                          <  2:3752957/99‑1 (MQ=255)

                          tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGc                                                                          >  1:714229/1‑99 (MQ=255)

                          tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGc                                                                          <  1:2955055/99‑1 (MQ=255)

                            aaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCat                                                                        >  1:402855/1‑99 (MQ=255)

                            aaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCat                                                                        >  1:2315791/1‑99 (MQ=255)

                            aaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCat                                                                        >  1:2794204/1‑99 (MQ=255)

                            aaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCat                                                                        >  2:2303597/1‑99 (MQ=255)

                              cgtcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCatat                                                                      <  1:3854091/99‑1 (MQ=255)

                              cgtcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCatat                                                                      <  1:1300567/99‑1 (MQ=255)

                               gtcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATc                                                                     <  1:311440/99‑1 (MQ=255)

                               gtcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATc                                                                     >  1:3747199/1‑99 (MQ=255)

                                tcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGtggatttgcccctatatttccagacatc                                                                    <  1:1146270‑M2/99‑29 (MQ=255)

                                   ttATCTTACCGGTAAAGAAGTTCAGGTCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCa                                                                 >  1:3087114/1‑99 (MQ=255)

                                   ttATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCa                                                                 <  2:1259959/99‑1 (MQ=255)

                                   ttATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCa                                                                 >  2:771580/1‑99 (MQ=255)

                                     aTCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATg                                                               >  2:905773/1‑99 (MQ=255)

                                      tCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATgg                                                              >  2:2815631/1‑99 (MQ=255)

                                      tCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATgg                                                              >  1:3619866/1‑99 (MQ=255)

                                        ttACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGa                                                            <  2:177828/99‑1 (MQ=255)

                                        ttACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGa                                                            >  2:1685064/1‑99 (MQ=255)

                                         tACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGAt                                                           <  2:322190/99‑1 (MQ=255)

                                         tACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGAt                                                           >  1:2588011/1‑99 (MQ=255)

                                         aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGAt                                                           >  2:630018‑M2/58‑99 (MQ=255)

                                           ccGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGc                                                         >  2:1528098/1‑99 (MQ=255)

                                            cGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg                                                        >  1:2509614/1‑99 (MQ=255)

                                            cGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg                                                        <  1:1766035/99‑1 (MQ=255)

                                            cGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg                                                        >  1:162477/1‑99 (MQ=255)

                                              gTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTa                                                      >  2:172983/1‑99 (MQ=255)

                                               tAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTAt                                                     <  1:2487331/99‑1 (MQ=255)

                                                 aagaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTa                                                   >  2:2801753/1‑99 (MQ=255)

                                                 aagaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTa                                                   >  1:2270447/1‑99 (MQ=255)

                                                 aagaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTa                                                   <  1:3165253/99‑1 (MQ=255)

                                                  agaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAg                                                  >  1:2414394/1‑99 (MQ=255)

                                                   gaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGt                                                 <  2:2091261/99‑1 (MQ=255)

                                                    aagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTg                                                >  1:3038199/1‑99 (MQ=255)

                                                      gTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGaa                                              <  2:3023476/99‑1 (MQ=255)

                                                        tCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACt                                            <  1:2754025/99‑1 (MQ=255)

                                                         cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTg                                           <  1:671536/99‑1 (MQ=255)

                                                           ggCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCt                                         >  1:1593806/1‑99 (MQ=255)

                                                           ggCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCt                                         >  1:346692/1‑99 (MQ=255)

                                                            gtgatattggttgtctggagattcagggggccagtctaCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCtt                                        >  2:2768305‑M2/39‑99 (MQ=255)

                                                             ccATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTg                                       >  1:177363/1‑99 (MQ=255)

                                                             ccATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTg                                       >  1:2223105/1‑99 (MQ=255)

                                                              cATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGa                                      >  1:2094571/1‑99 (MQ=255)

                                                               atgatgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGAt                                     <  2:3378009/99‑1 (MQ=255)

                                                                tgatgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATc                                    <  2:1124597/99‑1 (MQ=255)

                                                                  atgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTg                                  >  1:851465/1‑99 (MQ=255)

                                                                     cAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCAt                               <  1:200189/99‑1 (MQ=255)

                                                                      aGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGtggatttgcccctatatttccagacatctgttatcacttcacccattacaagcccgctgccgcaga                              >  1:1262124‑M2/1‑33 (MQ=255)

                                                                       ggCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTa                             <  1:1461862/99‑1 (MQ=255)

                                                                       ggCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTa                             <  2:1339377/99‑1 (MQ=255)

                                                                        gCGGTTTGTTATGGGGCAACGGTAGCACGAGATTGTTGTGTTATTCTGTTGTCATATCGGCTAGGGATGCGTATTAGTGGACTGTTTCATCTGCCTTAt                            >  2:3277219/1‑99 (MQ=255)

                                                                        gCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTAt                            <  2:19222/99‑1 (MQ=255)

                                                                        gCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTAt                            >  1:1476773/1‑99 (MQ=255)

                                                                          ggTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCa                          <  1:3288431/99‑1 (MQ=255)

                                                                          ggTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCa                          <  2:1830669/99‑1 (MQ=255)

                                                                           gTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAg                         >  1:1640421/1‑99 (MQ=255)

                                                                           gTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAg                         <  2:592621/99‑1 (MQ=255)

                                                                            tttGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAgg                        >  2:431108/1‑99 (MQ=255)

                                                                             ttGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGga                       <  1:1215391/99‑1 (MQ=255)

                                                                              tGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGgac                      <  2:605589/99‑1 (MQ=255)

                                                                                         gccagtctaCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTaa           >  2:1461698‑M2/10‑99 (MQ=255)

                                                                                         aaCGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTaa           >  2:2854216/1‑99 (MQ=255)

                                                                                          aCGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAt          <  2:3269794/99‑1 (MQ=255)

                                                                                          aCGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAt          <  1:1847354/99‑1 (MQ=255)

                                                                                           cGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATg         >  1:3897539/1‑99 (MQ=255)

                                                                                             ggAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGaa       >  2:1882516/1‑99 (MQ=255)

                                                                                             ggAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGaa       >  1:78472/1‑99 (MQ=255)

                                                                                              gAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAg      >  1:3238635/1‑99 (MQ=255)

                                                                                               aGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAgg     <  2:3186333/99‑1 (MQ=255)

                                                                                                 ccAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTa   >  1:2062227/1‑99 (MQ=255)

                                                                                                 aCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTa   <  1:1102660‑M2/98‑1 (MQ=255)

TCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAG  >  NC_000913/4542016‑4542212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.