Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,029,739 (A)8→7 coding (231/1191 nt) rlmI ← 23S rRNA m(5)C1962 methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,029,7320A.100.0% 238.1 / NA 56coding (238/1191 nt)rlmI23S rRNA m(5)C1962 methyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (28/28);  total (28/28)

GCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGATGGTTT  >  NC_000913/1029594‑1029857
                                                                                                                                          |                                                                                                                             
gcaCCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGaa                                                                                                                              >  1:600192/1‑140 (MQ=255)
gcaCCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGaa                                                                                                                              >  1:590786/1‑140 (MQ=255)
      gAAAACTACCGAAACGATCGATAGTAATACCCCGCAGGCCCTCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACTCCATTTTTGTGCTTGTTGCAAACGGCGGGaaaaaaag                                                                                                                        <  2:921764/140‑2 (MQ=255)
           ttACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATg                                                                                                                  >  1:893101/1‑140 (MQ=255)
               cGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGa                                                                                                              <  1:677926/140‑1 (MQ=255)
                gAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGAt                                                                                                             <  2:600192/140‑1 (MQ=255)
                gAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGAt                                                                                                             <  2:590786/140‑1 (MQ=255)
                      atcgatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGaaaaaaagcaa                                                                                                                     >  2:427868/1‑123 (MQ=255)
                      atcgatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGaaaaaaagcaa                                                                                                                     <  1:427868/127‑5 (MQ=255)
                       tcgatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCa                                                                                                      >  1:308694/1‑140 (MQ=255)
                         gatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGTGAAAAAAAGCAATGTCGATAGACTCAGa                                                                                                    <  2:305950/140‑1 (MQ=255)
                         gatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGa                                                                                                    <  1:589746/140‑1 (MQ=255)
                             gTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACggg                                                                                                >  2:23053/1‑140 (MQ=255)
                               aaTACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTc                                                                                              <  2:198083/140‑1 (MQ=255)
                                aTACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCa                                                                                             <  2:563526/140‑1 (MQ=255)
                                 tACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCaa                                                                                            >  1:36716/1‑140 (MQ=255)
                                     cGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGt                                                                                        >  2:281504/1‑140 (MQ=255)
                                     cGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGt                                                                                        >  1:1037289/1‑140 (MQ=255)
                                     cGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGt                                                                                        >  2:647130/1‑140 (MQ=255)
                                     cGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGGCGATAGACTCAGACGGGCCAAAAGt                                                                                        >  2:130753/1‑140 (MQ=255)
                                     cGGCAGGCCATCAGATTATCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACg                                                                                                  >  2:441289/1‑130 (MQ=255)
                                     cGGCAGGCCATCAGATTATCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACg                                                                                                  <  1:441289/130‑1 (MQ=255)
                                      ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGa                                                                                                    >  1:583538/1‑127 (MQ=255)
                                      ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGa                                                                                                    <  2:583538/127‑1 (MQ=255)
                                      ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTc                                                                                       >  1:710732/1‑140 (MQ=255)
                                      ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTc                                                                                       >  1:216986/1‑140 (MQ=255)
                                      ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGACAAACGTc                                                                                       >  1:1033845/1‑140 (MQ=255)
                                        cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCa                                                                                             <  1:675165/132‑1 (MQ=255)
                                        cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCa                                                                                             >  2:675165/1‑132 (MQ=255)
                                        cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCa                                                                                     >  2:187299/1‑140 (MQ=255)
                                        cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCa                                                                                     >  1:627085/1‑140 (MQ=255)
                                        cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGGCAAACGTCCa                                                                                     >  1:911140/1‑140 (MQ=255)
                                            ccATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGAcg                                                                                 <  1:281504/140‑1 (MQ=255)
                                             cATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGGAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGGCCCGAcgc                                                                                >  2:150700/1‑140 (MQ=255)
                                                     tctcCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCgg                                                                        >  1:183394/1‑140 (MQ=255)
                                                              aTTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGaa                                                               <  2:183394/140‑1 (MQ=255)
                                                              aTTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGaa                                                               >  2:686813/1‑140 (MQ=255)
                                                               ttAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAg                                                              <  2:308694/140‑1 (MQ=255)
                                                                       tAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGaa                                                      <  1:91434/140‑1 (MQ=255)
                                                                       tAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGaa                                                      <  2:216986/140‑1 (MQ=255)
                                                                          cTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATaa                                                   >  1:708816/1‑140 (MQ=255)
                                                                          cTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGGCAAACGTCCAGACGCGCGCCCGGACTTGCGAAGCTGGCGAATaa                                                   >  2:1006217/1‑140 (MQ=255)
                                                                             tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAgcg                                                >  2:775880/1‑140 (MQ=255)
                                                                             tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAgcg                                                >  2:97110/1‑140 (MQ=255)
                                                                             tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAgcg                                                >  1:161661/1‑140 (MQ=255)
                                                                               gAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGcgcc                                              <  2:315896/140‑1 (MQ=255)
                                                                               gAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGcgcc                                              <  2:110988/140‑1 (MQ=255)
                                                                               gAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGcgcc                                              <  1:168630/140‑1 (MQ=255)
                                                                                aGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGcgccg                                             >  2:867882/1‑140 (MQ=255)
                                                                                        tttttGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTaa                                     <  1:867882/140‑1 (MQ=255)
                                                                                          tttGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAAcc                                   <  1:775880/140‑1 (MQ=255)
                                                                                                ccagccagTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTc                             >  2:291583/1‑140 (MQ=255)
                                                                                                     cagTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCtga                        <  1:150700/140‑1 (MQ=255)
                                                                                                     cagTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCtga                        <  1:647130/140‑1 (MQ=255)
                                                                                                       gTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCtgatg                      <  1:23053/140‑1 (MQ=255)
                                                                                                       gTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCtgatg                      <  2:893101/140‑1 (MQ=255)
                                                                                                                     gtgCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGa        <  2:708816/140‑1 (MQ=255)
                                                                                                                     gtgCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGa        <  1:291583/140‑1 (MQ=255)
                                                                                                                     gtgCTTGTTGCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGa        <  2:911140/140‑1 (MQ=255)
                                                                                                                         ttgttgCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGATGGt    <  2:710732/140‑1 (MQ=255)
                                                                                                                           gttgCAAACGGCGGGAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGATGGgtt  >  2:565975/1‑140 (MQ=255)
                                                                                                                                          |                                                                                                                             
GCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAATATCGATGGTTT  >  NC_000913/1029594‑1029857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: