Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,879,516	T→C	Y86C (TAT→TGT)	cas1 ←	multifunctional nuclease Cas1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,879,516	0	T	C	100.0%	269.3 / NA	73	Y86C (TAT→TGT)	cas1	multifunctional nuclease Cas1
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/33);  total (40/33)

GGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTG  >  NC_000913/2879383‑2879650                                                                                                                                      |                                                                                                                                       ggCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAacac                                                                                                                                  >  2:126930/1‑140 (MQ=255)          aGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCg                                                                                                                         <  1:57572/140‑1 (MQ=255)          aGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCg                                                                                                                         <  2:46574/140‑1 (MQ=255)               ctacAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTcc                                                                                                                    <  2:640902/137‑1 (MQ=255)                tcCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTccc                                                                                                                   <  2:719199/140‑1 (MQ=255)                tcCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTccc                                                                                                                   <  2:39227/140‑1 (MQ=255)                tcCAAACCGAAGTTCAAACATTTTACCTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTccc                                                                                                                   <  2:923566/140‑1 (MQ=255)                   aaaCCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCccca                                                                                                                <  2:844518/140‑1 (MQ=255)                     aCCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccacc                                                                                                              <  2:697276/140‑1 (MQ=255)                     aCCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccacc                                                                                                              <  1:443425/140‑1 (MQ=255)                     aCCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccacc                                                                                                              <  1:126930/140‑1 (MQ=255)                       cGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCg                                                                                                                         <  1:555609/127‑1 (MQ=255)                       cGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCg                                                                                                                         >  2:555609/1‑127 (MQ=255)                       cGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccaccca                                                                                                            <  2:899831/140‑1 (MQ=255)                             tCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACcaa                                                                                                      <  2:313710/140‑1 (MQ=255)                                     tttACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccacc                                                                                                              >  1:159430/1‑124 (MQ=255)                                     tttACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCcccacc                                                                                                              <  2:159430/124‑1 (MQ=255)                                       tacgtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATAc                                                                                                         <  2:14749/127‑1 (MQ=255)                                       tacgtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATAc                                                                                                         >  1:14749/1‑127 (MQ=255)                                            acgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTg                                                                                       >  1:134909/1‑140 (MQ=255)                                               aCCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTgcgc                                                                                    >  2:485055/1‑140 (MQ=255)                                                ccTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCa                                                                                   <  1:613477/140‑1 (MQ=255)                                                     aGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAg                                                                              <  2:895798/140‑1 (MQ=255)                                                     aGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAg                                                                              <  2:891678/140‑1 (MQ=255)                                                          cAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTa                                                                         >  1:808948/1‑140 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACGAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          >  1:403746/1‑140 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          >  2:259689/1‑140 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          <  1:24777/140‑1 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          >  1:709799/1‑140 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          >  1:659248/1‑140 (MQ=255)                                                                         agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa                                                          >  1:405491/1‑140 (MQ=255)                                                                           cAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAcc                                                        <  2:709799/140‑1 (MQ=255)                                                                                   gCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTAcc                                                <  1:485055/140‑1 (MQ=255)                                                                                     cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAg                                              >  1:356229/1‑140 (MQ=255)                                                                                     cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAg                                              >  2:345517/1‑140 (MQ=255)                                                                                        aTAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGtt                                           <  1:769125/140‑1 (MQ=255)                                                                                            agcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAg                                       <  2:659248/140‑1 (MQ=255)                                                                                            agcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAg                                       <  2:405491/140‑1 (MQ=255)                                                                                             gcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGc                                      <  2:966823/140‑1 (MQ=255)                                                                                             gcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGc                                      <  2:219576/140‑1 (MQ=255)                                                                                              cagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCa                                     <  1:406558/140‑1 (MQ=255)                                                                                                  ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCatgat                                 >  2:208682/1‑140 (MQ=255)                                                                                                  ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCatgat                                 >  2:490081/1‑140 (MQ=255)                                                                                                     tCTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCa                              >  2:948016/1‑140 (MQ=255)                                                                                                      cTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAg                             >  2:135967/1‑140 (MQ=255)                                                                                                      cTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAg                             >  1:228252/1‑140 (MQ=255)                                                                                                      cTGAACGCGCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAg                             >  2:41616/1‑140 (MQ=255)                                                                                                           cgcgCACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAAc                        >  1:579709/1‑140 (MQ=255)                                                                                                              gcACCTCCAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGa                     <  1:948016/140‑1 (MQ=255)                                                                                                                    ccAGGCTGACCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAAc               <  1:259689/140‑1 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGTAACCGAGCCAACAGGAatat       >  1:540037/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAg                    >  1:862848/1‑127 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAg                    <  2:862848/127‑1 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGcc                  >  1:214976/1‑129 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGcc                  <  2:214976/129‑1 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCa                 <  2:432514/130‑1 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCa                 >  1:432514/1‑130 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:911260/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:966321/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:39419/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:810239/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:202741/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:635515/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:590646/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:658859/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:773381/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:806395/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:392037/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:380173/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:298442/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  2:140803/1‑140 (MQ=255)                                                                                                                            aCCAGAAGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGAAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat       >  1:979475/1‑140 (MQ=255)                                                                                                                                 aaGCACAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTg  <  1:298442/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                       GGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTG  >  NC_000913/2879383‑2879650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑