Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	554,581	T→C	intergenic (‑144/‑30)	ppiB ← / → cysS	peptidyl‑prolyl cis‑trans isomerase B/cysteine‑‑tRNA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	554,581	0	T	C	100.0%	240.3 / NA	65	intergenic (‑144/‑30)	ppiB/cysS	peptidyl‑prolyl cis‑trans isomerase B/cysteine‑‑tRNA ligase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/27);  total (38/27)

TCCTGTTCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAATTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGATCTC  >  NC_000913/554445‑554715                                                                                                                                         |                                                                                                                                       tCCTGTTCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTAc                                                                                                                                     >  2:282939/1‑140 (MQ=255)  ccTGTTCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTAcc                                                                                                                                    <  2:110441/140‑1 (MQ=255)    tGTTCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCca                                                                                                                                  >  2:580822/1‑140 (MQ=255)      ttCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCcaca                                                                                                                                <  1:580822/140‑1 (MQ=255)      ttCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCcaca                                                                                                                                <  1:130608/140‑1 (MQ=255)            ttGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTc                                                                                                                          >  2:532042/1‑140 (MQ=255)                           aCCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCg                                                                                                           <  2:390890/140‑1 (MQ=255)                            cccAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGa                                                                                                          <  1:282939/140‑1 (MQ=255)                                                gggTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATAct                                                                                      >  1:846957/1‑140 (MQ=255)                                                 ggtggtGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATActc                                                                                     >  2:367206/1‑140 (MQ=255)                                                   tggtgTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTg                                                                                   >  2:123371/1‑140 (MQ=255)                                                    ggtgTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGa                                                                                  >  2:716164/1‑140 (MQ=255)                                                      tgtTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCa                                                                                           >  1:398778/1‑129 (MQ=255)                                                      tgtTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCa                                                                                           <  2:398778/129‑1 (MQ=255)                                                      tgtTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGaca                                                                                >  2:279768/1‑140 (MQ=255)                                                            aGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCaa                                                                          <  1:879909/140‑1 (MQ=255)                                                               aTAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCaaaaa                                                                       >  1:173760/1‑140 (MQ=255)                                                                tAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAag                                                                      >  1:362351/1‑140 (MQ=255)                                                                 aaCCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAaga                                                                     >  2:90707/1‑140 (MQ=255)                                                                  aCCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    <  1:367206/140‑1 (MQ=255)                                                                  aCCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    >  1:166227/1‑140 (MQ=255)                                                                  aCCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    >  1:842451/1‑140 (MQ=255)                                                                  aCCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    <  2:833673/140‑1 (MQ=255)                                                                   ccGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAgg                                                                   >  1:261990/1‑140 (MQ=255)                                                                      cACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGaca                                                                                >  2:49535/1‑124 (MQ=255)                                                                      cACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGaca                                                                                <  1:49535/124‑1 (MQ=255)                                                                      cACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAAt                                                                >  1:9706/1‑140 (MQ=255)                                                                       aCGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    <  1:401493/135‑1 (MQ=255)                                                                       aCGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAagag                                                                    >  2:401493/1‑135 (MQ=255)                                                                       aCGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAAtt                                                               <  1:123371/140‑1 (MQ=255)                                                                        cGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAAttt                                                              <  1:439061/140‑1 (MQ=255)                                                                                    caCGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACCGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCAc                                                  >  1:823608/1‑140 (MQ=255)                                                                                         aaTGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCgg                                             >  2:798334/1‑140 (MQ=255)                                                                                           tGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCgggg                                           >  2:703261/1‑140 (MQ=255)                                                                                           tGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCgggg                                           >  1:310760/1‑140 (MQ=255)                                                                                             tATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGaa                                         >  2:1000650/1‑140 (MQ=255)                                                                                             tATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGaa                                         >  2:574105/1‑140 (MQ=255)                                                                                             tATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGaa                                         >  2:63764/1‑140 (MQ=255)                                                                                              aTGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAg                                        >  2:115681/1‑140 (MQ=255)                                                                                               tGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGt                                       <  1:532042/140‑1 (MQ=255)                                                                                               tGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGt                                       <  1:279768/140‑1 (MQ=255)                                                                                                     ttCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCg                                     <  1:993648/136‑1 (MQ=255)                                                                                                     ttCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCg                                     >  2:993648/1‑136 (MQ=255)                                                                                                     ttCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCAt                                 >  2:1002926/1‑140 (MQ=255)                                                                                                     ttCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCAt                                 >  1:854576/1‑140 (MQ=255)                                                                                                     ttCGCGCGGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCAt                                 <  1:716164/140‑1 (MQ=255)                                                                                                       cgcgcgGGAAATATGGGTATTATACGCAACTCAACTACCCACCCATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGCCACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGt                               >  2:968774/1‑140 (MQ=255)                                                                                                       cgcgcgGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGt                               >  2:36335/1‑140 (MQ=255)                                                                                                         cgcgGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTAc                             >  1:1040559/1‑140 (MQ=255)                                                                                                         cgcgGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTAc                             <  2:78321/140‑1 (MQ=255)                                                                                                         cgcgGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTAc                             <  1:703261/140‑1 (MQ=255)                                                                                                          gcgGGAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACg                            <  1:644408/140‑1 (MQ=255)                                                                                                              gAAATATGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACgtgtg                        >  2:65957/1‑140 (MQ=255)                                                                                                                  tatGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGa                    <  2:842451/140‑1 (MQ=255)                                                                                                                    tGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTAc                             >  1:261323/1‑129 (MQ=255)                                                                                                                    tGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTAc                             <  2:261323/129‑1 (MQ=255)                                                                                                                    tGGGTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAAt                  <  2:9706/140‑1 (MQ=255)                                                                                                                      ggTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCa                <  1:1002926/140‑1 (MQ=255)                                                                                                                      ggTATTATACGCAACTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCa                <  1:115681/140‑1 (MQ=255)                                                                                                                                 caactcaactACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAt     <  2:1040559/140‑1 (MQ=255)                                                                                                                                 caactcaactACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAt     <  2:261990/140‑1 (MQ=255)                                                                                                                                  aaCTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAtc    >  2:618606/1‑140 (MQ=255)                                                                                                                                  aaCTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAtc    >  2:462242/1‑140 (MQ=255)                                                                                                                                  aaCTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAtc    >  2:867282/1‑140 (MQ=255)                                                                                                                                   aCTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAtct   <  1:36335/140‑1 (MQ=255)                                                                                                                                    cTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCg             >  2:66202/1‑129 (MQ=255)                                                                                                                                    cTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCg             <  1:66202/129‑1 (MQ=255)                                                                                                                                    cTCAACTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGAtctc  >  1:1005386/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                       TCCTGTTCCGTTTGATTGGTGCTTCAACCCAGTTCGGGTCATATATAGGGTGGTGTTATAGCATAACCGCACGATCGGATCATCACGCAATGTATGCTGATTCGCGCGGGAAATATGGGTATTATACGCAACTCAATTACCCACACATGTCTAAACGGAATCTTCGATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGATCTC  >  NC_000913/554445‑554715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑