Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,162,896	T→C	G7G (GGT→GGC)	baeS →	sensory histidine kinase BaeS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,162,896	0	T	C	100.0%	301.3 / NA	82	G7G (GGT→GGC)	baeS	sensory histidine kinase BaeS
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/41);  total (41/41)

CACCTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGTATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAA  >  NC_000913/2162765‑2163031                                                                                                                                    |                                                                                                                                        cgccTGGCTTAGCATGGCGTTGATCGTCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCAGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCgg                                                                                                                                 <  2:321227/138‑1 (MQ=255) cacCTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCgg                                                                                                                                 <  1:830941/140‑1 (MQ=255)    cTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCaa                                                                                                                              >  2:461476/1‑140 (MQ=255)     tGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCaaa                                                                                                                             >  1:862941/1‑140 (MQ=255)      ggCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGAAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAAc                                                                                                                            >  2:834587/1‑140 (MQ=255)       gCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACt                                                                                                                           >  1:1002013/1‑140 (MQ=255)       gCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACt                                                                                                                           >  2:475294/1‑140 (MQ=255)       gCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACt                                                                                                                           >  1:602176/1‑140 (MQ=255)          tAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGtt                                                                                                                        >  1:974478/1‑140 (MQ=255)            gCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTc                                                                                                                      >  2:101684/1‑140 (MQ=255)            gCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTc                                                                                                                      >  1:654696/1‑140 (MQ=255)             cATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCt                                                                                                                     >  2:139993/1‑140 (MQ=255)              aTGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTg                                                                                                                    >  1:537704/1‑140 (MQ=255)              aTGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTg                                                                                                                    >  2:809359/1‑140 (MQ=255)                 gCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCg                                                                                                                 >  1:128757/1‑140 (MQ=255)                 gCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCg                                                                                                                 >  2:767580/1‑140 (MQ=255)                  cGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGa                                                                                                                >  1:33163/1‑140 (MQ=255)                       atcatcGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTc                                                                                                           >  2:373477/1‑140 (MQ=255)                         catcGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGc                                                                                                         <  2:862941/140‑1 (MQ=255)                          atcGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGcc                                                                                                        <  1:809359/140‑1 (MQ=255)                          atcGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGcc                                                                                                        <  2:33163/140‑1 (MQ=255)                            cGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCAc                                                                                                      <  1:373477/140‑1 (MQ=255)                            cGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCAc                                                                                                      >  2:413435/1‑140 (MQ=255)                            cGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCAc                                                                                                      >  1:860576/1‑140 (MQ=255)                                  tCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCAt                                                                                                >  2:552185/1‑140 (MQ=255)                                   ccGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCAtt                                                                                               >  1:758384/1‑140 (MQ=255)                                         ttCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAAGTGTTTCTGGCGATTTTCGCCAc                                                                                                      >  2:719388/1‑127 (MQ=255)                                         ttCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCAc                                                                                                      <  1:719388/127‑1 (MQ=255)                                         ttCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTg                                                                                         >  1:807124/1‑140 (MQ=255)                                           cATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCt                                                                                       <  1:196996/140‑1 (MQ=255)                                           cATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCt                                                                                       >  1:373219/1‑140 (MQ=255)                                           cATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCt                                                                                       <  2:508930/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     >  1:170224/1‑140 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  2:124077/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:53454/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:461476/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:135470/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:443488/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:104026/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  2:1002013/140‑1 (MQ=255)                                             tCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTACTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCTGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  2:974478/140‑1 (MQ=255)                                              cTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGAt                                                                                    <  2:654696/140‑1 (MQ=255)                                              cTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGAt                                                                                    <  2:807124/140‑1 (MQ=255)                                                  gCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGt                                                                                <  2:602176/140‑1 (MQ=255)                                                   ccAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTg                                                                                              >  2:987948/1‑125 (MQ=255)                                                   ccAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTg                                                                                              <  1:987948/125‑1 (MQ=255)                                                   ccAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     >  2:72890/1‑134 (MQ=255)                                                   ccAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:72890/134‑1 (MQ=255)                                                      gagTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     >  1:629761/1‑131 (MQ=255)                                                      gagTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  2:629761/131‑1 (MQ=255)                                                       agTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCa                                                                           >  2:686420/1‑140 (MQ=255)                                                       agTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCa                                                                           <  1:413435/140‑1 (MQ=255)                                                        gTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     >  2:402826/1‑129 (MQ=255)                                                        gTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGa                                                                                     <  1:402826/129‑1 (MQ=255)                                                        gTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCAc                                                                          >  1:279824/1‑140 (MQ=255)                                                           ccGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTgg                                                                       >  2:65356/1‑140 (MQ=255)                                                              aaCGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCg                                                                    <  1:834587/140‑1 (MQ=255)                                                                 gATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTACATTGTCTTGCTGATCAGTATGCACTGGGCGGTg                                                                 >  2:907219/1‑140 (MQ=255)                                                                   tACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCg                                                               >  2:147840/1‑140 (MQ=255)                                                                             aaTGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTg                                                                 <  2:764719/128‑1 (MQ=255)                                                                             aaTGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTg                                                                 >  1:764719/1‑128 (MQ=255)                                                                               tGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGa                                                   >  1:989384/1‑140 (MQ=255)                                                                                 tAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTTATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGc                                                 >  2:950908/1‑140 (MQ=255)                                                                                  aGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCg                                                <  1:552185/140‑1 (MQ=255)                                                                                   gCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGt                                               <  2:860576/140‑1 (MQ=255)                                                                                   gCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGt                                               <  2:989384/140‑1 (MQ=255)                                                                                          cgcgGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTa                                        <  1:139993/140‑1 (MQ=255)                                                                                           gcggcgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTgg                                             >  2:1043297/1‑134 (MQ=255)                                                                                           gcggcgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTgg                                             <  1:1043297/134‑1 (MQ=255)                                                                                              gcgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGa                                    <  2:279824/140‑1 (MQ=255)                                                                                              gcgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGa                                    <  2:170224/140‑1 (MQ=255)                                                                                              gcgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGa                                    <  1:147840/140‑1 (MQ=255)                                                                                               cgAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTTATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGAt                                   <  1:950908/140‑1 (MQ=255)                                                                                                     aGGAGCGCGCAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATc                             <  1:101684/140‑1 (MQ=255)                                                                                                          cgcgcAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCa                        <  2:377085/140‑1 (MQ=255)                                                                                                            cgcAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATg                      >  1:128384/1‑140 (MQ=255)                                                                                                              cAATGAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGt                    >  1:854098/1‑140 (MQ=255)                                                                                                                  gAAGTTCTGGCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATg                <  2:758384/140‑1 (MQ=255)                                                                                                                           gCGACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGAt       >  1:995963/1‑140 (MQ=255)                                                                                                                             gACCCGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCTATTa     <  1:281354/140‑1 (MQ=255)                                                                                                                               cccGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACa   <  1:907219/140‑1 (MQ=255)                                                                                                                                ccGGCATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACaa  >  2:445516/1‑140 (MQ=255)                                                                                                                                    |                                                                                                                                        CACCTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGAAGTTCTGGCGACCCGGTATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAA  >  NC_000913/2162765‑2163031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑