BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,659,082	(T)_8→7	noncoding (91/91 nt)	gadF →	small regulatory RNA GadF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,659,075	0	T	.	100.0%	622.6 / NA	142	noncoding (84/91 nt)	gadF	small regulatory RNA GadF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (67/75); total (67/75)

Only 100 of 151 total aligned reads displayed.

TGCAGATGCTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACATTTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAGAACCGTTATTTCT  >  NC_000913/3658938‑3659210

tGCAGATGCTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAttt                                                                                                                                       >  2:424096/1‑140 (MQ=255)

  cAGATGCTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAttttt                                                                                                                                     >  2:1104578/1‑140 (MQ=255)

       gCTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGATTGCTGGCAGGAACTGTTGGCAGAACGGCAACAtttttttgtc                                                                                                                                >  1:10473/1‑137 (MQ=255)

        cTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAtttttttgtcg                                                                                                                               >  2:14096/1‑136 (MQ=255)

        cTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAtttttttgtcg                                                                                                                               <  1:424096/140‑5 (MQ=255)

        cTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAtttttttgtcg                                                                                                                               <  1:82026/140‑5 (MQ=255)

        cTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTAAGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACAtttttttgtcg                                                                                                                               >  2:1268233/1‑136 (MQ=255)

            tttCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGa                                                                                                                          <  1:1261774/140‑1 (MQ=255)

             ttCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGAc                                                                                                                         <  1:444859/140‑1 (MQ=255)

                   aCCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCAcc                                                                                                                   <  1:1127616/140‑1 (MQ=255)

                       ccGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGt                                                                                                               <  1:504764/140‑1 (MQ=255)

                         ggTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCg                                                                                                             <  1:1150690/140‑1 (MQ=255)

                         ggTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCg                                                                                                             >  2:280640/1‑140 (MQ=255)

                         ggTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCg                                                                                                             >  1:1210835/1‑140 (MQ=255)

                          gTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGa                                                                                                                          <  2:211344/126‑1 (MQ=255)

                          gTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGa                                                                                                                          >  1:211344/1‑126 (MQ=255)

                          gTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGa                                                                                                            >  1:155160/1‑140 (MQ=255)

                           tGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGAt                                                                                                           <  1:29168/140‑1 (MQ=255)

                               tACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACt                                                                                                       <  2:240673/140‑1 (MQ=255)

                                   aaaGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGc                                                                                                   <  2:184048/140‑1 (MQ=255)

                                    aaGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGcc                                                                                                  <  1:1103626/140‑1 (MQ=255)

                                    aaGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGcc                                                                                                  <  2:165091/140‑1 (MQ=255)

                                     aGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCt                                                                                                 >  2:1310349/1‑140 (MQ=255)

                                      ggAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTg                                                                                                >  1:500030/1‑140 (MQ=255)

                                      ggAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTg                                                                                                <  1:631148/140‑1 (MQ=255)

                                        agagGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTa                                                                                              <  2:137391/140‑1 (MQ=255)

                                         gagGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTa                                                                                              >  2:1162613/1‑139 (MQ=255)

                                         gagGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTAt                                                                                             >  1:824687/1‑140 (MQ=255)

                                          agGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTa                                                                                              >  2:139153/1‑138 (MQ=255)

                                          agGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTa                                                                                              <  1:139153/138‑1 (MQ=255)

                                          agGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATc                                                                                            >  1:139549/1‑140 (MQ=255)

                                          agGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATc                                                                                            >  2:110969/1‑140 (MQ=255)

                                           ggCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGACGATCACTGTGCCTGTATcc                                                                                           >  1:853254/1‑140 (MQ=255)

                                            gCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATcc                                                                                           <  2:1210570/139‑1 (MQ=255)

                                            gCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATcc                                                                                           >  1:1210570/1‑139 (MQ=255)

                                             cTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCa                                                                                         <  1:1149757/140‑1 (MQ=255)

                                                    gACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACt                                                                                  <  1:379797/140‑1 (MQ=255)

                                                    gACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACt                                                                                  >  2:719248/1‑140 (MQ=255)

                                                      cTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTgg                                                                                >  2:209174/1‑140 (MQ=255)

                                                          aTTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGa                                                                            <  2:824687/140‑1 (MQ=255)

                                                          aTTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGa                                                                            <  2:1208835/140‑1 (MQ=255)

                                                           ttCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGAc                                                                           <  1:719248/140‑1 (MQ=255)

                                                             ccccTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACaa                                                                         <  2:649557/140‑1 (MQ=255)

                                                             ccccTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACaa                                                                         <  1:35753/140‑1 (MQ=255)

                                                                cTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAAccc                                                                      >  2:836711/1‑140 (MQ=255)

                                                                cTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAAccc                                                                      <  2:500030/140‑1 (MQ=255)

                                                                cTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAAccc                                                                      >  1:1106548/1‑140 (MQ=255)

                                                                     aTGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTa                                                                 <  2:1213192/140‑1 (MQ=255)

                                                                        tgtATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGAc                                                                           >  2:486148/1‑127 (MQ=255)

                                                                        tgtATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGAc                                                                           <  1:486148/127‑1 (MQ=255)

                                                                        tgtATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGc                                                              >  2:1345175/1‑140 (MQ=255)

                                                                        tgtATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGc                                                              >  1:905647/1‑140 (MQ=255)

                                                                        tgtATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGc                                                              >  1:341332/1‑140 (MQ=255)

                                                                          tATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCg                                                            <  2:501612/140‑1 (MQ=255)

                                                                             ccaccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTg                                                         >  2:1060250/1‑140 (MQ=255)

                                                                             ccaccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTg                                                         >  1:474646/1‑140 (MQ=255)

                                                                             ccaccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTg                                                         >  1:1251172/1‑140 (MQ=255)

                                                                             ccaccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCACACTATGCCGCTg                                                         >  2:569444/1‑140 (MQ=255)

                                                                              caccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTgg                                                        >  1:585840/1‑140 (MQ=255)

                                                                              caccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTgg                                                        >  1:1182516/1‑140 (MQ=255)

                                                                                ccaGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTTCTGGCTGACAACCCCACTATGCCGCTGGt                                                       >  1:201497/1‑139 (MQ=255)

                                                                                  aGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAAccc                                                                      >  2:1147861/1‑122 (MQ=255)

                                                                                  aGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTgg                                                        >  2:896929/1‑136 (MQ=255)

                                                                                  aGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTg                                                    >  2:1045408/1‑140 (MQ=255)

                                                                                  aGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTg                                                    >  2:385235/1‑140 (MQ=255)

                                                                                   gTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGt                                                   <  2:585840/140‑1 (MQ=255)

                                                                                    tAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTa                                                  >  2:851877/1‑140 (MQ=255)

                                                                                    tAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTa                                                  >  1:1184928/1‑140 (MQ=255)

                                                                                    tAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTa                                                  >  1:183883/1‑140 (MQ=255)

                                                                                      gAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTaaa                                                <  1:385235/140‑1 (MQ=255)

                                                                                      gAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTaaa                                                <  2:418059/140‑1 (MQ=255)

                                                                                      gAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTaaa                                                <  1:221081/140‑1 (MQ=255)

                                                                                      gAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCACACTATGCCGCTGGTCTGTaaa                                                <  1:569444/140‑1 (MQ=255)

                                                                                       aaCCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAAt                                               <  1:1310349/140‑1 (MQ=255)

                                                                                       aaCCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACCGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGc                                                           >  1:968013/1‑128 (MQ=255)

                                                                                         cccTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATcc                                             >  1:67256/1‑140 (MQ=255)

                                                                                          ccTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTGCTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATccc                                            <  2:341332/140‑1 (MQ=255)

                                                                                          ccTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATccc                                            <  2:7019/140‑1 (MQ=255)

                                                                                          ccTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGACGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATccc                                            <  2:853254/140‑1 (MQ=255)

                                                                                           cTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCt                                           <  2:474646/140‑1 (MQ=255)

                                                                                            ttCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTc                                          <  1:1345175/140‑1 (MQ=255)

                                                                                              cGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGt                                                       <  1:1308005/125‑1 (MQ=255)

                                                                                              cGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCat                                        >  2:280778/1‑140 (MQ=255)

                                                                                              cGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCat                                        >  2:1166088/1‑140 (MQ=255)

                                                                                              cGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCat                                        >  2:647105/1‑140 (MQ=255)

                                                                                                  gCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATAtct                                    >  2:15179/1‑140 (MQ=255)

                                                                                                       aaTGCTGGCAGGAACTGTTGGGAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTctcct                               >  1:1416505/1‑140 (MQ=255)

                                                                                                       aaTGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTctcct                               >  1:1013093/1‑140 (MQ=255)

                                                                                                        aTGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTctcctc                              >  2:896913/1‑140 (MQ=255)

                                                                                                        aTGCTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTctcctc                              >  1:844711/1‑140 (MQ=255)

                                                                                                           cTGGCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCACACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTcgcg                           <  2:949447/140‑1 (MQ=255)

                                                                                                             ggCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCcgcgcgcg                         <  2:1013093/140‑1 (MQ=255)

                                                                                                             ggCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTcgcgcg                         <  2:1029433/140‑1 (MQ=255)

                                                                                                             ggCAGGAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTcgcgcg                         <  1:647105/140‑1 (MQ=255)

                                                                                                                 ggAACTGTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAAt                     <  1:101617/140‑1 (MQ=255)

                                                                                                                       gTTGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAg               <  1:1363721/140‑1 (MQ=255)

                                                                                                                        ttGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACGTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAGa              >  1:676848/1‑140 (MQ=255)

                                                                                                                        ttGGCAGAACGGCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAGa              >  1:282440/1‑140 (MQ=255)

                                                                                                                                  ggCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAGAACCGTTAttt    >  1:695450/1‑140 (MQ=255)

                                                                                                                                  ggCAACA‑TTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCACAATTTaaa                >  2:224791/1‑128 (MQ=255)

TGCAGATGCTGATTTCATTACCCCCGGTGATTACTAAAGGAGAGGCTAAAACGACTTTATTCCCCTGGTATGTGTATCCACCAGTAGAACCCTTCGTTGCCCGAATGCTGGCAGGAACTGTTGGCAGAACGGCAACATTTTTTTTGTCGTTGACCTCACCATGTCGATCACTGTGCCTGTATCCCACCTTACTGGCTGACAACCCCACTATGCCGCTGGTCTGTAAATCCCTCATATCTCTCCTCGCGCGCAATTTAAAGAACCGTTATTTCT  >  NC_000913/3658938‑3659210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`