Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,279,520	(T)7→6	intergenic (+172/‑344)	narK → / → narG	nitrate:nitrite antiporter NarK/nitrate reductase A subunit alpha

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,279,514	0	T	.	100.0%	352.7 / NA	81	intergenic (+166/‑350)	narK/narG	nitrate:nitrite antiporter NarK/nitrate reductase A subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (34/47);  total (34/47)

CTGCGGCTGCGTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGCTTTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTAATAGTT  >  NC_000913/1279381‑1279647                                                                                                                                      |                                                                                                                                      ctgcggctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGCtttttta                                                                                                                                 >  2:797965/1‑139 (MQ=255) ctgcggctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGCtttttta                                                                                                                                 >  2:1128236/1‑139 (MQ=255)    cggctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTGTCCTTTGCGCGGCATGATGTCGCGCttttttatgc                                                                                                                              >  2:978923/1‑136 (MQ=255)     ggctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCg                                                                                                                            >  1:693386/1‑140 (MQ=255)      gctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGt                                                                                                                           <  1:693780/140‑1 (MQ=255)      gctgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGt                                                                                                                           >  1:95859/1‑140 (MQ=255)        tgcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCa                                                                                                                         >  1:496791/1‑140 (MQ=255)         gcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAt                                                                                                                        <  2:693386/140‑1 (MQ=255)         gcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAt                                                                                                                        <  2:557771/140‑1 (MQ=255)         gcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAt                                                                                                                        <  2:347331/140‑1 (MQ=255)         gcgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAt                                                                                                                        <  1:1338871/140‑1 (MQ=255)          cgTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAtt                                                                                                                       <  2:1276052/140‑1 (MQ=255)            ttcattcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTa                                                                                                                     >  2:1281378/1‑140 (MQ=255)              cattcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGt                                                                                                                   <  2:496791/140‑1 (MQ=255)                ttcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAttt                                                                                                                      >  1:81942/1‑135 (MQ=255)                ttcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCAttt                                                                                                                      <  2:81942/135‑1 (MQ=255)                ttcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTa                                                                                                                 <  1:1128236/140‑1 (MQ=255)                 tcaCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTac                                                                                                                >  2:1273751/1‑140 (MQ=255)                  caCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTaca                                                                                                               <  2:994627/140‑1 (MQ=255)                  caCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTaca                                                                                                               <  1:80565/140‑1 (MQ=255)                   aCCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTacaa                                                                                                              <  1:92501/140‑1 (MQ=255)                    ccccAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTacaac                                                                                                             >  2:184989/1‑140 (MQ=255)                     cccAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTacaaca                                                                                                            >  1:1310038/1‑140 (MQ=255)                        aGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATAc                                                                                                         <  2:338276/140‑1 (MQ=255)                             cttacttTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATg                                                                                                    <  1:978923/140‑1 (MQ=255)                              ttacttTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGt                                                                                                   >  1:1156117/1‑140 (MQ=255)                                       tAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTaa                                                                                                      >  2:1376041/1‑128 (MQ=255)                                       tAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTaa                                                                                                      <  1:1376041/128‑1 (MQ=255)                                           cTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTAtt                                                                                      >  1:1027119/1‑140 (MQ=255)                                            tCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTAttt                                                                                     >  2:747971/1‑140 (MQ=255)                                            tCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTAttt                                                                                     >  1:562251/1‑140 (MQ=255)                                            tCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCAGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTAttt                                                                                     >  2:976043/1‑140 (MQ=255)                                               tGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGc                                                                                  <  2:1153222/140‑1 (MQ=255)                                               tGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGc                                                                                  >  2:210149/1‑140 (MQ=255)                                                   attcattcACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGa                                                                              <  2:562251/140‑1 (MQ=255)                                                      cattcaCTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGAttt                                                                           <  1:210149/140‑1 (MQ=255)                                                      cattcaCTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGAttt                                                                           >  1:361371/1‑140 (MQ=255)                                                        ttcaCTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGc                                                                                  >  2:1330216/1‑131 (MQ=255)                                                        ttcaCTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGc                                                                                  <  1:1330216/131‑1 (MQ=255)                                                            cTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATAATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTaa                                                                     >  2:1171250/1‑140 (MQ=255)                                                             ttGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAag                                                                    <  2:902383/140‑1 (MQ=255)                                                             ttGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAag                                                                    <  2:1027119/140‑1 (MQ=255)                                                             ttGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAag                                                                    >  2:787814/1‑140 (MQ=255)                                                              tGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAaga                                                                   <  1:1281378/140‑1 (MQ=255)                                                               gccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  <  2:671243/140‑1 (MQ=255)                                                               gccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  >  2:228472/1‑140 (MQ=255)                                                               gccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  <  1:1200918/140‑1 (MQ=255)                                                               gccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  >  1:136645/1‑140 (MQ=255)                                                                ccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGc                                                                 <  2:1156117/140‑1 (MQ=255)                                                                ccgccTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGc                                                                 <  2:912628/140‑1 (MQ=255)                                                                       ccTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAat                                                          >  1:1326965/1‑140 (MQ=255)                                                                           tAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGt                                                      <  1:228472/140‑1 (MQ=255)                                                                           tAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCAGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGt                                                      <  1:976043/140‑1 (MQ=255)                                                                             aaCCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  <  1:346570/126‑1 (MQ=255)                                                                             aaCCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAagag                                                                  >  2:346570/1‑126 (MQ=255)                                                                              aCCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTAc                                                   >  2:129150/1‑140 (MQ=255)                                                                              aCCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTAc                                                   >  1:1381772/1‑140 (MQ=255)                                                                              aCCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTAc                                                   <  1:773164/140‑1 (MQ=255)                                                                                cGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTAccc                                                 <  1:1273751/140‑1 (MQ=255)                                                                                  aaTTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCa                                                >  1:1018910/1‑139 (MQ=255)                                                                                  aaTTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCa                                                <  2:1018910/139‑1 (MQ=255)                                                                                  aaTTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCAt                                               >  1:1237430/1‑140 (MQ=255)                                                                                   aTTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATg                                              <  1:787814/140‑1 (MQ=255)                                                                                        ataGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGaa                                         <  2:1381772/140‑1 (MQ=255)                                                                                        ataGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGaa                                         <  1:3854/140‑1 (MQ=255)                                                                                         taGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATggg                                            <  1:365346/136‑1 (MQ=255)                                                                                         taGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATggg                                            >  2:365346/1‑136 (MQ=255)                                                                                          agagTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATa                                       <  1:747971/140‑1 (MQ=255)                                                                                          agagTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATa                                       <  2:1237430/140‑1 (MQ=255)                                                                                          agagTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATa                                       <  1:129150/140‑1 (MQ=255)                                                                                              tAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTcc                                   >  1:516634/1‑140 (MQ=255)                                                                                               aaaaTATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCt                                  >  2:1046256/1‑140 (MQ=255)                                                                                               aaaaTATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCt                                  <  2:136645/140‑1 (MQ=255)                                                                                                 aaTATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATAc                                      <  2:458402/134‑1 (MQ=255)                                                                                                 aaTATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATAc                                      >  1:458402/1‑134 (MQ=255)                                                                                                 aaTATTTGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTa                                >  1:927407/1‑140 (MQ=255)                                                                                                      ttGATTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATAcc                           >  2:313449/1‑140 (MQ=255)                                                                                                      ttGATTATCCTTTACGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATa                                       >  2:1374191/1‑128 (MQ=255)                                                                                                      ttGATTATCCTTTACGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATa                                       <  1:1374191/128‑1 (MQ=255)                                                                                                         aTTATCCTTTGCGCGGCATGATGTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCAt                        <  2:1254735/140‑1 (MQ=255)                                                                                                                          atgatgTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTaa       <  2:516634/140‑1 (MQ=255)                                                                                                                               gTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTAATAGtt  <  2:1310038/140‑1 (MQ=255)                                                                                                                               gTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTAATAGtt  <  2:927407/140‑1 (MQ=255)                                                                                                                               gTCGCGC‑TTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTAATAGtt  <  1:797965/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                      CTGCGGCTGCGTTCATTCACCCCAGTCACTTACTTTAGTAAGCTCCTGGGATTCATTCACTTGCCGCCTTCCTGTAAACCGAATTATATAGAGTAAAATATTTGATTATCCTTTGCGCGGCATGATGTCGCGCTTTTTTTATGCGTCATTTAGTTACAACATACTAATGTTATATGGTTTATTTCGCCGGATTTCATTAAGAGCCATTAATATGTTACCCATGGGGAATACTCCTTAATACCCATCTGCATAAAAATCTTAATAGTT  >  NC_000913/1279381‑1279647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑