Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,389,171	Δ1 bp	coding (56/849 nt)	yfbP →	uncharacterized protein YfbP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,389,169	0	C	.	100.0%	405.7 / NA	93	coding (54/849 nt)	yfbP	uncharacterized protein YfbP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (45/48);  total (45/48)

ATCCGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGCCCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACG  >  NC_000913/2389032‑2389302                                                                                                                                          |                                                                                                                                      aTCCGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGccg                                                                                                                                     <  2:1156102/140‑2 (MQ=255) aTCCGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGccg                                                                                                                                     <  2:1003744/140‑2 (MQ=255)   ccGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGccggg                                                                                                                                   <  2:1384901/140‑4 (MQ=255)   ccGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGccggg                                                                                                                                   <  2:1259994/140‑4 (MQ=255)      gTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGcc                                                                                                                               >  2:1161791/1‑140 (MQ=255)             gttgGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTtcct                                                                                                                        >  1:117629/1‑140 (MQ=255)                ggtggGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCg                                                                                                                     >  1:112408/1‑140 (MQ=255)                 gtggGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGa                                                                                                                    <  2:163167/140‑1 (MQ=255)                   gggATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAAc                                                                                                                  >  2:718388/1‑140 (MQ=255)                     gATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACgg                                                                                                                >  1:679179/1‑140 (MQ=255)                        tAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGAtt                                                                                                             >  2:1358866/1‑140 (MQ=255)                            aCATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTAcc                                                                                                         <  1:1049947/140‑1 (MQ=255)                            aCATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTAcc                                                                                                         <  2:250446/140‑1 (MQ=255)                            aCATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTAcc                                                                                                         <  2:109921/140‑1 (MQ=255)                                ttATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTAc                                                                                                     >  1:240151/1‑140 (MQ=255)                                 tatataAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACCTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACt                                                                                                    >  1:1070875/1‑140 (MQ=255)                                        aCAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGAt                                                                                             >  1:1393368/1‑140 (MQ=255)                                         cAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATg                                                                                            <  1:1358866/140‑1 (MQ=255)                                         cAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATg                                                                                            <  1:10789/140‑1 (MQ=255)                                           gATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgca                                                                                          >  2:1075030/1‑140 (MQ=255)                                           gATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgca                                                                                          <  2:109126/140‑1 (MQ=255)                                           gATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgca                                                                                          >  2:702571/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCg                                                                                                        <  1:737505/125‑1 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCg                                                                                                        >  2:737505/1‑125 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  2:349963/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  2:274663/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  2:145458/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  1:1078186/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  2:501451/1‑140 (MQ=255)                                            aTAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcag                                                                                         >  2:812068/1‑140 (MQ=255)                                              aaGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATgcagca                                                                                       <  1:812068/140‑1 (MQ=255)                                                 cGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCatat                                                                                    >  2:437519/1‑140 (MQ=255)                                                    aTGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGGAGCATATGGt                                                                                 >  1:973787/1‑140 (MQ=255)                                                    aTGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGt                                                                                 >  2:1154547/1‑140 (MQ=255)                                                    aTGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGt                                                                                 >  1:1199796/1‑140 (MQ=255)                                                         tACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACgg                                                                            >  1:1277149/1‑140 (MQ=255)                                                            aTAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGgaga                                                                         <  1:1154547/140‑1 (MQ=255)                                                            aTAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGgaga                                                                         <  1:1075030/140‑1 (MQ=255)                                                             tAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGAc                                                                        <  2:973787/140‑1 (MQ=255)                                                              aaaTTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACt                                                                       >  1:432077/1‑140 (MQ=255)                                                                 tttttATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGtt                                                                    <  1:763744/140‑1 (MQ=255)                                                                 tttttATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGtt                                                                    <  1:396526/140‑1 (MQ=255)                                                                 tttttATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGtt                                                                    <  2:117629/140‑1 (MQ=255)                                                                      aTGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGt                                                               <  2:679179/140‑1 (MQ=255)                                                                      aTGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGt                                                               <  1:702571/140‑1 (MQ=255)                                                                            aGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTAc                                                         <  2:581804/140‑1 (MQ=255)                                                                            aGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTAc                                                         <  1:718388/140‑1 (MQ=255)                                                                             ggAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACt                                                        <  1:145458/140‑1 (MQ=255)                                                                                 cATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGcc                                                    <  2:112408/140‑1 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  >  1:669262/1‑140 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  <  2:240151/140‑1 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  >  1:394966/1‑140 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  <  1:1161791/140‑1 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  <  2:991889/140‑1 (MQ=255)                                                                                   tgatgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCAGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTa                                                  <  2:665424/140‑1 (MQ=255)                                                                                      tgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTa                                                          >  2:645727/1‑129 (MQ=255)                                                                                      tgaAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTa                                                          <  1:645727/129‑1 (MQ=255)                                                                                         aaCTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTc                                            >  1:313872/1‑140 (MQ=255)                                                                                          aCTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCa                                           <  1:166979/140‑1 (MQ=255)                                                                                           cTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAg                                          <  1:274663/140‑1 (MQ=255)                                                                                               ttCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGc                                      <  2:1323171/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  1:1338535/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  1:102217/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  2:432077/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  1:796291/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  1:349963/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  2:1199796/140‑1 (MQ=255)                                                                                                   tCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  2:1070875/140‑1 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAg                                          <  1:660101/131‑1 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAg                                          <  1:1420546/131‑1 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAg                                          >  2:660101/1‑131 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAg                                          >  2:1420546/1‑131 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaaa                                 <  2:665634/140‑1 (MQ=255)                                                                                                    cGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaaa                                 >  2:467974/1‑140 (MQ=255)                                                                                                     gCAGTAGTGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAAc                                <  2:313872/140‑1 (MQ=255)                                                                                                         tagtGATATTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTAcc                            >  1:1276085/1‑140 (MQ=255)                                                                                                              atatTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGc                                      >  2:792775/1‑125 (MQ=255)                                                                                                              atatTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGc                                      <  1:792775/125‑1 (MQ=255)                                                                                                              atatTTCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAg                       >  1:156018/1‑140 (MQ=255)                                                                                                                 tttCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAgtgt                    >  1:78057/1‑140 (MQ=255)                                                                                                                  ttCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTAc                             >  1:15838/1‑130 (MQ=255)                                                                                                                  ttCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTAc                             <  2:15838/130‑1 (MQ=255)                                                                                                                  ttCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGtgtg                   <  2:669262/140‑1 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  >  1:423587/1‑124 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATaa                                  <  2:423587/124‑1 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAAc                                <  2:1055056/126‑1 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAAc                                >  1:1055056/1‑126 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGc                  >  2:643463/1‑140 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGc                  >  2:1013025/1‑140 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGc                  >  1:313729/1‑140 (MQ=255)                                                                                                                   tCACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGc                  >  2:262842/1‑140 (MQ=255)                                                                                                                    cACCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCg                 <  2:1078186/140‑1 (MQ=255)                                                                                                                     aCCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGa                >  1:795347/1‑140 (MQ=255)                                                                                                                     aCCTGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGa                >  1:505960/1‑140 (MQ=255)                                                                                                                        tGGCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAAc             >  1:746387/1‑140 (MQ=255)                                                                                                                         ggCATTGATGGAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACg            <  1:467974/140‑1 (MQ=255)                                                                                                                                   gAATTTG‑CCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACg  <  2:394966/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                      ATCCGGTTACTTGTTGGTGGGATTAAAACATTTATATAAACAGATAAGCGGATGTTTACATAAATTTTTATGTGAAGGAACATGATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGCCCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACG  >  NC_000913/2389032‑2389302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑