| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,180,017 | A→C | K8Q (AAA→CAA) | rplJ → | 50S ribosomal subunit protein L10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,180,017 | 0 | A | C | 98.2% | 401.5 / ‑2.3 | 108 | K8Q (AAA→CAA) | rplJ | 50S ribosomal subunit protein L10 |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (54/52); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACA > NC_000913/4179883‑4180149 | ttCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGaccaacaa > 2:602026/1‑140 (MQ=255) ttATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGAt < 1:296747/140‑1 (MQ=255) ttATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGAt < 2:1156314/140‑1 (MQ=255) ttATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGAt > 2:705803/1‑140 (MQ=255) ttATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGAt < 2:130363/140‑1 (MQ=255) ttATATTCTGGCTTGTTTCTGCTCACCGTAATCAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGAt < 1:623520/140‑1 (MQ=255) cTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCt < 1:162490/140‑1 (MQ=255) gCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGaa > 1:657571/1‑140 (MQ=255) gCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGaa > 1:969273/1‑140 (MQ=255) tttCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAg > 1:134154/1‑140 (MQ=255) cTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGa < 2:1190882/140‑1 (MQ=255) gCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAg > 1:1060169/1‑140 (MQ=255) gCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAg > 1:1201612/1‑140 (MQ=255) ccGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGcc > 2:327759/1‑140 (MQ=255) ccGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGcc > 1:642583/1‑140 (MQ=255) ccGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGcc > 1:193496/1‑140 (MQ=255) cGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCa > 2:49595/1‑140 (MQ=255) cGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCa > 2:166788/1‑140 (MQ=255) cGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCa > 1:1123375/1‑140 (MQ=255) tAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGc > 1:855519/1‑128 (MQ=255) tAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGc < 2:855519/128‑1 (MQ=255) aaTTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAg > 2:850348/1‑140 (MQ=255) aaGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgc < 1:602026/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGTTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:187717/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:803617/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:781145/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:710349/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:1015814/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 2:989998/140‑1 (MQ=255) aGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:584902/140‑1 (MQ=255) aGACGCTCTCCCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:1305577/140‑1 (MQ=255) aCGCTCTCTCCGTTTGGAGGAGTGAAGTGATGTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCACAGCTAATGGCTTTAAATCTTCAAGACCAACACGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCt > 2:334536/1‑140 (MQ=255) aCGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCt < 2:344951/140‑1 (MQ=255) aCGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCt < 1:705803/140‑1 (MQ=255) ctctctCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTc > 1:485641/1‑140 (MQ=255) tctctcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCt < 2:326979/140‑1 (MQ=255) tctctcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCAAAGTAGCCAAAGGCGCGCTGTCt > 1:990629/1‑140 (MQ=255) ctctcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTg > 2:29239/1‑140 (MQ=255) tcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGGTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg > 2:1269578/1‑130 (MQ=255) tcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGgcgcg < 1:1269578/130‑1 (MQ=255) tcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGc < 2:382728/138‑1 (MQ=255) tcCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGc > 1:382728/1‑138 (MQ=255) tGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCagtag < 1:550108/137‑1 (MQ=255) tGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCagtag > 2:550108/1‑137 (MQ=255) gaggagTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCg < 1:49595/140‑1 (MQ=255) gaggagTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCg > 2:587104/1‑140 (MQ=255) ggagTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGa > 1:1302749/1‑140 (MQ=255) ggagTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGa > 1:146568/1‑140 (MQ=255) agtgaagtgaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGAtt > 2:1421429/1‑140 (MQ=255) tgaagtgaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTcc > 1:920731/1‑140 (MQ=255) tgaagtgaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTcc > 2:430508/1‑140 (MQ=255) agtgaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGt < 2:1236224/140‑1 (MQ=255) gaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGc < 1:850348/140‑1 (MQ=255) gaGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGc < 1:642459/140‑1 (MQ=255) aGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCg < 1:484102/140‑1 (MQ=255) aGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCg < 2:964217/140‑1 (MQ=255) tCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTaa < 1:327759/140‑1 (MQ=255) tCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTaa > 2:983870/1‑140 (MQ=255) agagagATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAAc > 1:53246/3‑140 (MQ=255) cAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACt < 2:311410/140‑1 (MQ=255) agagATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTg < 2:642583/140‑1 (MQ=255) tttCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATa > 2:574706/1‑140 (MQ=255) tttCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATa > 1:181154/1‑140 (MQ=255) ttCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATaa < 2:1060169/140‑1 (MQ=255) tGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGa > 1:423148/1‑140 (MQ=255) tGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGa > 1:870206/1‑140 (MQ=255) gCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTg < 1:1418536/126‑1 (MQ=255) gCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTg > 2:1418536/1‑126 (MQ=255) gCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACt > 2:263218/1‑140 (MQ=255) aaaCATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGa < 2:485641/140‑1 (MQ=255) aaCATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGaa < 1:334536/140‑1 (MQ=255) aaCATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGaa < 2:487937/140‑1 (MQ=255) aGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTa > 2:1399593/1‑140 (MQ=255) aGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTa > 1:372513/1‑140 (MQ=255) aGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCACGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTa > 1:489394/1‑140 (MQ=255) gAGCAAAGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTaaa > 2:781155/1‑140 (MQ=255) cAAAGCTAATGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCa > 1:701767/1‑140 (MQ=255) aaaGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAg > 1:397083/1‑140 (MQ=255) aaaGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAg > 2:105844/1‑140 (MQ=255) aaGCTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAgg > 1:1071919/1‑140 (MQ=255) cTAATGGCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTcg > 2:932070/1‑140 (MQ=255) aTGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGa < 2:701767/140‑1 (MQ=255) ggCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAg < 2:193496/140‑1 (MQ=255) ggCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAg < 1:115815/140‑1 (MQ=255) ggCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAg < 1:1169922/140‑1 (MQ=255) ggCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAg < 1:166788/140‑1 (MQ=255) gCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGc < 2:572546/140‑1 (MQ=255) gCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGc < 1:1421429/140‑1 (MQ=255) gCTTTAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCACGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGc < 2:489394/140‑1 (MQ=255) tttAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGc > 1:1139303/1‑138 (MQ=255) tttAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGc < 2:1139303/138‑1 (MQ=255) tttAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTg < 2:1201612/140‑1 (MQ=255) tttAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTg < 2:53246/140‑1 (MQ=255) tttAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTg > 2:967225/1‑140 (MQ=255) tAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGc < 1:983870/140‑1 (MQ=255) tAAATCTTCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGc < 2:36375/140‑1 (MQ=255) ttCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATAc > 2:1394584/1‑140 (MQ=255) tCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACa < 2:397083/140‑1 (MQ=255) tCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACa > 2:63915/1‑140 (MQ=255) tCAAGACCAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACa > 1:440724/1‑140 (MQ=255) | TTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGGCAAACATCCAGGAGCAAAGCTAATGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACA > NC_000913/4179883‑4180149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |