BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,499,799	A→G	pseudogene (993/1199 nt)	yjgX ←	KpLE2 phage‑like element; putative phosphoethanolamine transferase YjgX, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,499,799	0	A	G	100.0%	438.0 / NA	116	pseudogene (993/1199 nt)	yjgX	KpLE2 phage‑like element; putative phosphoethanolamine transferase YjgX, N‑terminal fragment
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (45/71); total (45/71)

Only 100 of 116 total aligned reads displayed.

ACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGACGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGAAATGAC  >  NC_000913/4499666‑4499930

aCCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTAt                                                                                                                               >  1:324461/1‑140 (MQ=255)

aCCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTAt                                                                                                                               >  1:265112/1‑140 (MQ=255)

  cATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGt                                                                                                                             >  1:1401931/1‑140 (MQ=255)

   aTAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTc                                                                                                                            >  1:715129/1‑140 (MQ=255)

    tAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           <  2:79550/140‑1 (MQ=255)

    tAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           >  1:115142/1‑140 (MQ=255)

    tAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           >  2:475980/1‑140 (MQ=255)

    tAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           <  2:612528/140‑1 (MQ=255)

      aCAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACt                                                                                                                         <  2:636081/140‑1 (MQ=255)

      aCAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACt                                                                                                                         <  2:324461/140‑1 (MQ=255)

       cAGGTTAGTTA‑CTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTgg                                                                                                                       <  1:662234/140‑1 (MQ=255)

        aGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGNCGNGCTGATGAGGNGTTATGTCACTgg                                                                                                                       <  1:1266415/140‑1 (MQ=255)

        aGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTgg                                                                                                                       <  2:115142/140‑1 (MQ=255)

        aGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTgg                                                                                                                       <  2:62543/140‑1 (MQ=255)

        aGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTgg                                                                                                                       <  2:1070678/140‑1 (MQ=255)

         ggTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGc                                                                                                                      >  1:202030/1‑140 (MQ=255)

            tagttaTCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCggg                                                                                                                   >  2:1055679/1‑139 (MQ=255)

            tagttaTCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGt                                                                                                                   >  2:875706/1‑140 (MQ=255)

            tagttaTCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGt                                                                                                                   >  1:1339733/1‑140 (MQ=255)

                taTCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGtaata                                                                                                               <  2:622039/140‑1 (MQ=255)

                taTCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGtaata                                                                                                               <  1:1096269/140‑1 (MQ=255)

                  tCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTaataat                                                                                                             <  1:788837/140‑1 (MQ=255)

                  tCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTaataat                                                                                                             <  2:202030/140‑1 (MQ=255)

                   cTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATc                                                                                                            <  1:359917/140‑1 (MQ=255)

                   cTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATc                                                                                                            >  1:540829/1‑140 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           <  1:524520/124‑1 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCa                                                                                                                           >  2:524520/1‑124 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCa                                                                                                           >  1:1116489/1‑140 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCa                                                                                                           <  1:1035085/140‑1 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCa                                                                                                           <  1:218027/140‑1 (MQ=255)

                    ttCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGGAATAATCa                                                                                                           >  2:276107/1‑140 (MQ=255)

                       gTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTg                                                                                                        >  1:59927/1‑140 (MQ=255)

                        tCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTgg                                                                                                       >  2:293431/1‑140 (MQ=255)

                         cTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGc                                                                                                      <  2:1339733/140‑1 (MQ=255)

                         cTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGc                                                                                                      <  2:1036360/140‑1 (MQ=255)

                         cTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGc                                                                                                      <  1:488698/140‑1 (MQ=255)

                          tGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGca                                                                                                     <  1:631173/140‑1 (MQ=255)

                          tGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGca                                                                                                     <  2:1081551/140‑1 (MQ=255)

                           gTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGcac                                                                                                    <  1:900354/140‑1 (MQ=255)

                           gTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGcac                                                                                                    <  1:1055679/140‑1 (MQ=255)

                           gTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGcac                                                                                                    <  1:481363/140‑1 (MQ=255)

                            tCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGcaca                                                                                                   >  2:1294280/1‑140 (MQ=255)

                              aGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACt                                                                                                 >  1:815929/1‑140 (MQ=255)

                                cGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGGACACTGt                                                                                               >  2:82276/1‑140 (MQ=255)

                                cGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGt                                                                                               >  1:511916/1‑140 (MQ=255)

                                  gATTGAATGGTGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAg                                                                                             <  2:1308155/140‑1 (MQ=255)

                                   aTTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAg                                                                                             >  1:69721/1‑139 (MQ=255)

                                   aTTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGc                                                                                            <  2:1248691/140‑1 (MQ=255)

                                     tGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCt                                                                                          <  1:1273812/140‑1 (MQ=255)

                                      gAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTc                                                                                         <  1:647321/140‑1 (MQ=255)

                                      gAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTc                                                                                         >  1:505237/1‑140 (MQ=255)

                                            cGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGca                                                                                   <  2:901464/140‑1 (MQ=255)

                                               tataTTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAg                                                                                             <  2:95960/127‑1 (MQ=255)

                                                  atTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGAc                                                                             <  2:1391469/140‑1 (MQ=255)

                                                   ttttCAGTACAAATACCGGTCATCCACTGAAAAATCCCTGCGAAA‑GGCCGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCa                                                                           <  2:1058496/140‑1 (MQ=255)

                                                    tttCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCa                                                                           <  2:1217385/140‑1 (MQ=255)

                                                    tttCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCa                                                                           <  2:192941/140‑1 (MQ=255)

                                                    tttCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCa                                                                           <  1:853034/140‑1 (MQ=255)

                                                           aCAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAatgat                                                                    >  1:215758/1‑140 (MQ=255)

                                                           aCAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGGAATAATCAGGGGCACACTGTAGGCTCCCTGCTCATGACCATaaatat                                                                    >  2:240161/1‑136 (MQ=255)

                                                               aTACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTATTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGaaa                                                                >  1:167071/1‑139 (MQ=255)

                                                               aTACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAAc                                                                <  1:475980/140‑1 (MQ=255)

                                                               aTACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAAc                                                                <  1:293536/140‑1 (MQ=255)

                                                                    ggTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAAc                                                                >  1:831008/1‑135 (MQ=255)

                                                                    ggTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAAc                                                                <  2:831008/135‑1 (MQ=255)

                                                                    ggTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGaa                                                           >  1:647080/1‑139 (MQ=255)

                                                                    ggTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGAt                                                           >  1:923901/1‑140 (MQ=255)

                                                                       cATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTgg                                                        >  1:267154/1‑140 (MQ=255)

                                                                        aTCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGc                                                       >  2:721865/1‑140 (MQ=255)

                                                                         tCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATTACCATAATGATGAACAGGATTGGCa                                                      <  2:776685/140‑1 (MQ=255)

                                                                         tCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCa                                                      <  1:721865/140‑1 (MQ=255)

                                                                         tCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCa                                                      <  1:962230/140‑1 (MQ=255)

                                                                         tCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCa                                                      <  2:215758/140‑1 (MQ=255)

                                                                         tCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCa                                                      <  1:875706/140‑1 (MQ=255)

                                                                               gAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCg                                                >  2:127907/1‑140 (MQ=255)

                                                                               gAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCg                                                >  1:895147/1‑140 (MQ=255)

                                                                                    aTACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGAc                                           <  2:1207139/140‑1 (MQ=255)

                                                                                    aTACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGAc                                           >  2:1160552/1‑140 (MQ=255)

                                                                                          gCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGGCCTGTCGCTGACCGACaa                                     >  2:898251/1‑139 (MQ=255)

                                                                                          gCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCCGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAg                                     >  2:669746/1‑140 (MQ=255)

                                                                                             aaaTGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGccc                                  <  1:293431/140‑1 (MQ=255)

                                                                                               aTGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCaa                                <  2:923901/140‑1 (MQ=255)

                                                                                                  aCGGGCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGc                             <  2:567604/140‑1 (MQ=255)

                                                                                                    gggCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCa                           <  2:815929/140‑1 (MQ=255)

                                                                                                     ggCACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGGAATAATCAGGGGTGCCCCGTGGCCTCCCGGGACATGACCATAATGATGAACAGGATTGGCACTGTCGCCTGCCGACAGCCCAAAGCCAg                          >  2:1159569/1‑140 (MQ=255)

                                                                                                       cACTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGaa                        <  1:626407/140‑1 (MQ=255)

                                                                                                        aCTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGc                             <  2:961502/134‑1 (MQ=255)

                                                                                                        aCTGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGc                             >  1:961502/1‑134 (MQ=255)

                                                                                                          tGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAg                          <  2:150368/135‑1 (MQ=255)

                                                                                                          tGATTTTTCTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAg                          >  1:150368/1‑135 (MQ=255)

                                                                                                                  cTACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCAt             <  1:1294280/140‑1 (MQ=255)

                                                                                                                   tACTGACGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATg            <  2:511916/140‑1 (MQ=255)

                                                                                                                        aCGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGa                         <  2:1816/122‑1 (MQ=255)

                                                                                                                        aCGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGa                         >  1:1816/1‑122 (MQ=255)

                                                                                                                        aCGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGaa       <  2:167071/140‑1 (MQ=255)

                                                                                                                        aCGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGaa       <  1:1331265/140‑1 (MQ=255)

                                                                                                                        aCGGGCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATGGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGaa       >  1:167388/1‑140 (MQ=255)

                                                                                                                          gggCTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGAAAt     <  2:505237/140‑1 (MQ=255)

                                                                                                                             cTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGAAATGAc  <  1:898251/140‑1 (MQ=255)

                                                                                                                             cTGATGAGGCGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGAAATGAc  <  1:1266332/140‑1 (MQ=255)

ACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAAATGACGGGCACTGATTTTTCTACTGACGGGCTGATGAGACGTTATGTCACTGGCGGTAATAATCAGTGGCACACTGTAGCCTCCCTGCACATGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAGCATGGCGAAATGAC  >  NC_000913/4499666‑4499930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`