Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,105,694	A→G	K94R (AAG→AGG)	ymdA →	uncharacterized protein YmdA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,105,694	0	A	G	100.0%	320.7 / NA	86	K94R (AAG→AGG)	ymdA	uncharacterized protein YmdA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (49/37);  total (49/37)

ACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCG  >  NC_000913/1105560‑1105830                                                                                                                                       |                                                                                                                                         aCCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGgctgg                                                                                                                                     <  1:1123569/140‑1 (MQ=255)      tAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGgctgg                                                                                                                                     >  1:480935/1‑135 (MQ=255)      tAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGgctgg                                                                                                                                     <  2:480935/135‑1 (MQ=255)      tAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGgct                                                                                                                                       <  1:360105/133‑1 (MQ=255)      tAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGgct                                                                                                                                       >  2:360105/1‑133 (MQ=255)      tAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTa                                                                                                                                <  1:1078838/140‑1 (MQ=255)                cTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCg                                                                                                                      >  1:599714/1‑140 (MQ=255)                 tGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGa                                                                                                                     <  2:1011722/140‑1 (MQ=255)                 tGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGa                                                                                                                     <  2:245853/140‑1 (MQ=255)                 tGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGa                                                                                                                     >  2:28885/1‑140 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   >  1:964783/1‑140 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   >  2:107034/1‑140 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   <  1:1325783/140‑1 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   >  2:522549/1‑140 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   >  1:1171789/1‑140 (MQ=255)                   cccACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAat                                                                                                                   >  2:555493/1‑140 (MQ=255)                             ggTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAGACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGt                                                                                                         >  1:885454/1‑140 (MQ=255)                             ggTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGt                                                                                                         >  1:462961/1‑140 (MQ=255)                               ttCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGttt                                                                                                       >  1:1279184/1‑140 (MQ=255)                                  tATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTg                                                                                                    >  1:1253415/1‑140 (MQ=255)                                  tATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTg                                                                                                    <  2:599714/140‑1 (MQ=255)                                    ttCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGaa                                                                                                  >  2:1413823/1‑140 (MQ=255)                                         ggCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATATACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACt                                                                                             >  2:319566/1‑140 (MQ=255)                                         ggCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACt                                                                                             >  1:1226962/1‑140 (MQ=255)                                         ggCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACt                                                                                             >  1:818638/1‑140 (MQ=255)                                         ggCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACt                                                                                             >  2:1418/1‑140 (MQ=255)                                         ggCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGCATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACt                                                                                             >  1:417706/1‑140 (MQ=255)                                              aaCCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGt                                                                                        >  1:867349/1‑140 (MQ=255)                                              aaCCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGt                                                                                        >  2:1148229/1‑140 (MQ=255)                                              aaCCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGt                                                                                        >  2:618831/1‑140 (MQ=255)                                                  tACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCt                                                                                    <  2:417706/140‑1 (MQ=255)                                                               cGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATg                                                                       >  2:959596/1‑140 (MQ=255)                                                                 ttAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCg                                                                     >  1:528251/1‑140 (MQ=255)                                                                     tGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGAttt                                                                 <  2:1253415/140‑1 (MQ=255)                                                                      gAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTa                                                                <  1:555493/140‑1 (MQ=255)                                                                      gAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTa                                                                <  1:1277209/140‑1 (MQ=255)                                                                      gAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTa                                                                <  2:528251/140‑1 (MQ=255)                                                                      gAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTa                                                                >  1:945816/1‑140 (MQ=255)                                                                         cGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAAcc                                                             >  2:1369083/1‑140 (MQ=255)                                                                         cGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAAcc                                                             >  2:813858/1‑140 (MQ=255)                                                                         cGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAAcc                                                             >  2:242622/1‑140 (MQ=255)                                                                         cGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAAcc                                                             >  1:934289/1‑140 (MQ=255)                                                                         cGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAAcc                                                             >  1:1431/1‑140 (MQ=255)                                                                           gCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCaa                                                           <  2:1431/140‑1 (MQ=255)                                                                              aTGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCaaaaa                                                        >  1:852453/1‑140 (MQ=255)                                                                                gTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGc                                                      <  2:975610/140‑1 (MQ=255)                                                                                gTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGc                                                      <  1:959596/140‑1 (MQ=255)                                                                                   aaaaaCGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCctg                                                   <  1:28885/140‑1 (MQ=255)                                                                                        cgcgCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTa                                              <  1:107034/140‑1 (MQ=255)                                                                                         gcgcAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGc                                                      <  2:1275375/131‑1 (MQ=255)                                                                                         gcgcAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGc                                                      >  1:1275375/1‑131 (MQ=255)                                                                                           gcAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTacac                                           >  2:1197540/1‑140 (MQ=255)                                                                                           gcAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTacac                                           >  2:613106/1‑140 (MQ=255)                                                                                              aaTAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTa                                        <  2:818638/140‑1 (MQ=255)                                                                                                tAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                      <  2:1146214/140‑1 (MQ=255)                                                                                                tAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                      <  2:1171789/140‑1 (MQ=255)                                                                                                tAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                      <  2:934289/140‑1 (MQ=255)                                                                                                tAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                      <  1:522549/140‑1 (MQ=255)                                                                                                tAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                      <  2:945816/140‑1 (MQ=255)                                                                                                 aGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGa                                     >  2:419969/1‑140 (MQ=255)                                                                                                       aGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaag                               <  2:1279184/140‑1 (MQ=255)                                                                                                       aGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaag                               >  2:596261/1‑140 (MQ=255)                                                                                                       aGTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaag                               >  2:340619/1‑140 (MQ=255)                                                                                                        gTAAAAGTGCAGTATCTTGATATACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaaga                              <  1:319566/140‑1 (MQ=255)                                                                                                        gTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaaga                              <  1:242622/140‑1 (MQ=255)                                                                                                        gTAAAAGTGCAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaaga                              <  1:104423/140‑1 (MQ=255)                                                                                                              gTGCAGTATATTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGgtgt                        >  2:222257/1‑140 (MQ=255)                                                                                                                 cAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaaga                              <  1:378373/131‑1 (MQ=255)                                                                                                                 cAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACaaga                              >  2:378373/1‑131 (MQ=255)                                                                                                                 cAGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAag                     >  1:1178878/1‑140 (MQ=255)                                                                                                                  aGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGaa                                    <  1:55132/124‑1 (MQ=255)                                                                                                                  aGTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGaa                                    >  2:55132/1‑124 (MQ=255)                                                                                                                   gTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAagga                   <  1:804641/140‑1 (MQ=255)                                                                                                                   gTATCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAagga                   >  1:665873/1‑140 (MQ=255)                                                                                                                     aTCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAaggagg                 <  2:462961/140‑1 (MQ=255)                                                                                                                      tCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGc                >  2:947480/1‑140 (MQ=255)                                                                                                                      tCTTGATAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGc                >  1:705377/1‑140 (MQ=255)                                                                                                                            tAAACAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATg          >  1:111349/1‑140 (MQ=255)                                                                                                                              aaCAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGaa        >  1:668542/1‑140 (MQ=255)                                                                                                                               aCAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGaaa       <  1:1413823/140‑1 (MQ=255)                                                                                                                                cAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGTAACAAGAAGGTGTAAGGAGGCGTTATGaaaa      <  1:1418/140‑1 (MQ=255)                                                                                                                                cAGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGaaaa      >  2:890305/1‑140 (MQ=255)                                                                                                                                 aGAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAc     >  1:268891/1‑140 (MQ=255)                                                                                                                                  gAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcg    >  1:1245903/1‑140 (MQ=255)                                                                                                                                  gAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcg    <  2:111349/140‑1 (MQ=255)                                                                                                                                  gAAAAGGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcg    <  1:618831/140‑1 (MQ=255)                                                                                                                                   aaaagGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAag                     <  2:1121940/122‑1 (MQ=255)                                                                                                                                   aaaagGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAag                     >  1:1121940/1‑122 (MQ=255)                                                                                                                                   aaaagGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcgc   <  2:668542/140‑1 (MQ=255)                                                                                                                                   aaaagGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcgc   >  2:1138712/1‑140 (MQ=255)                                                                                                                                    aaagGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAcgcg  <  1:1148229/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                         ACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCG  >  NC_000913/1105560‑1105830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑