Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,588,033	C→T	V88V (GTG→GTA)	ydeR ←	putative fimbrial protein YdeR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,588,033	0	C	T	100.0%	314.2 / NA	87	V88V (GTG→GTA)	ydeR	putative fimbrial protein YdeR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (47/40);  total (47/40)

GAGTGATCTCATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTCACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAGCTTCTTTG  >  NC_000913/1587897‑1588168                                                                                                                                         |                                                                                                                                        gAGTGATCTCATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACg                                                                                                                                      >  2:1220797/1‑140 (MQ=255)        ctcATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCg                                                                                                                               >  1:1246651/1‑140 (MQ=255)           atcaACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCa                                                                                                                            <  2:1137030/140‑1 (MQ=255)            tcaACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCAc                                                                                                                           <  1:769071/140‑1 (MQ=255)              aacaaTAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTg                                                                                                                         >  2:782395/1‑140 (MQ=255)                caaTAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGc                                                                                                                                 <  1:63556/130‑1 (MQ=255)                caaTAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGc                                                                                                                                 >  2:63556/1‑130 (MQ=255)                 aaTAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCAc                                                                                                                      <  1:1184005/140‑1 (MQ=255)                 aaTAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCAc                                                                                                                      >  1:635147/1‑140 (MQ=255)                   tAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACtt                                                                                                                    >  2:949186/1‑140 (MQ=255)                   tAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACtt                                                                                                                    >  1:281898/1‑140 (MQ=255)                     aCCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGt                                                                                                                  >  1:971971/1‑140 (MQ=255)                     aCCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGt                                                                                                                  >  2:771017/1‑140 (MQ=255)                          tttGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCaa                                                                                                             >  2:49815/1‑140 (MQ=255)                           ttGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAAc                                                                                                            >  2:1120313/1‑140 (MQ=255)                             gCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTTCCTTCATTTTTGTAATAGCCCGTATTGTCAGTTGAGCCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCg                                                                                                          <  2:979615/140‑1 (MQ=255)                                 tCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACa                                                                                                      >  2:309707/1‑140 (MQ=255)                                   gCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAAt                                                                                                    <  1:482824/140‑1 (MQ=255)                                   gCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAAt                                                                                                    <  1:47083/140‑1 (MQ=255)                                   gCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAAt                                                                                                    <  1:949186/140‑1 (MQ=255)                                        tttttAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGtt                                                                                               >  2:1165828/1‑140 (MQ=255)                                        tttttAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGtt                                                                                               <  2:443446/140‑1 (MQ=255)                                           ttAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAAt                                                                                            <  2:1322367/140‑1 (MQ=255)                                            tAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCaa                                                                                                             >  1:891623/1‑122 (MQ=255)                                            tAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCaa                                                                                                             <  2:891623/122‑1 (MQ=255)                                             aaCGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGa                                                                                          <  2:971971/140‑1 (MQ=255)                                             aaCGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGa                                                                                          <  1:1220797/140‑1 (MQ=255)                                             aaCGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGa                                                                                          <  1:49815/140‑1 (MQ=255)                                               cGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACa                                                                                        >  1:260454/1‑140 (MQ=255)                                               cGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACa                                                                                        <  2:260454/140‑1 (MQ=255)                                               cGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACa                                                                                        <  2:739947/140‑1 (MQ=255)                                                  agcaTCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAg                                                                                     <  2:281898/140‑1 (MQ=255)                                                  agcaTCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAg                                                                                     >  1:153207/1‑140 (MQ=255)                                                       ccTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAata                                                                                <  2:1081215/140‑1 (MQ=255)                                                          ggTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATtg                                                                             >  1:242078/1‑140 (MQ=255)                                                          ggTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATtg                                                                             >  1:610740/1‑140 (MQ=255)                                                            tCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATtgtg                                                                           <  2:635147/140‑1 (MQ=255)                                                             cATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgc                                                                          <  1:309707/140‑1 (MQ=255)                                                             cATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgc                                                                          <  1:1205516/140‑1 (MQ=255)                                                              aTCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgcc                                                                         >  2:469522/1‑140 (MQ=255)                                                                cccTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACa                                                                                        >  2:121990/1‑123 (MQ=255)                                                                cccTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACa                                                                                        <  1:121990/123‑1 (MQ=255)                                                                cccTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccag                                                                       >  2:1260355/1‑140 (MQ=255)                                                                cccTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccag                                                                       >  1:951138/1‑140 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcca                                                                    <  2:824557/138‑1 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcca                                                                    >  1:1095141/1‑138 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcca                                                                    <  2:1095141/138‑1 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcca                                                                    >  1:824557/1‑138 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     <  2:1054233/137‑1 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     >  1:1054233/1‑137 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     <  1:219786/137‑1 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     >  2:534884/1‑137 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     <  1:534884/137‑1 (MQ=255)                                                                     aGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTgccagcc                                                                     >  2:219786/1‑137 (MQ=255)                                                                       ctctATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATg                                                                <  1:1371566/140‑1 (MQ=255)                                                                          tATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAg                                                             >  1:254645/1‑140 (MQ=255)                                                                             cTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAAc                                                          <  2:254645/140‑1 (MQ=255)                                                                             cTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAAc                                                          >  1:795778/1‑140 (MQ=255)                                                                               gAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCa                                                        <  1:1260355/140‑1 (MQ=255)                                                                                 atatTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAgg                                                      <  2:153207/140‑1 (MQ=255)                                                                                 atatTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAgg                                                      <  1:1120313/140‑1 (MQ=255)                                                                                      ttCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGgttgtt                                                 >  2:966810/1‑140 (MQ=255)                                                                                      ttCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGgttgtt                                                 >  1:322358/1‑140 (MQ=255)                                                                                       tCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGttgttg                                                >  1:1378252/1‑140 (MQ=255)                                                                                          gCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGTCAGCCAGATGCAGAACCAGGTTGTTGCAg                                             >  1:346777/1‑140 (MQ=255)                                                                                              tACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGCTGTTGCAGATTg                                         >  2:812691/1‑140 (MQ=255)                                                                                               aCCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCGCTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTgc                                        <  2:610740/140‑1 (MQ=255)                                                                                                ccTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTgcg                                       <  2:951138/140‑1 (MQ=255)                                                                                                   tCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGt                                    <  2:1246651/140‑1 (MQ=255)                                                                                                        tttGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATaaa                               >  1:382501/1‑140 (MQ=255)                                                                                                        tttGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATaaa                               >  1:289929/1‑140 (MQ=255)                                                                                                         ttGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAg                              <  2:1378252/140‑1 (MQ=255)                                                                                                          tGTAATAACCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGa                             >  1:1143866/1‑140 (MQ=255)                                                                                                              ataaCCCGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATccc                         >  1:977609/1‑140 (MQ=255)                                                                                                                    cGTATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGAt                   <  1:771017/140‑1 (MQ=255)                                                                                                                      tATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATaaa                               >  1:859779/1‑126 (MQ=255)                                                                                                                      tATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATaaa                               <  2:859779/126‑1 (MQ=255)                                                                                                                      tATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATccc                         >  2:690620/1‑132 (MQ=255)                                                                                                                      tATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATccc                         <  1:690620/132‑1 (MQ=255)                                                                                                                      tATTGTCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTa                 >  2:295550/1‑140 (MQ=255)                                                                                                                           tCAGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGtt            >  2:1371079/1‑140 (MQ=255)                                                                                                                           tCAGTTGAACCCGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGtt            >  2:376722/1‑140 (MQ=255)                                                                                                                             aGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCgaga                    >  1:231594/1‑130 (MQ=255)                                                                                                                             aGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCgaga                    <  2:231594/130‑1 (MQ=255)                                                                                                                             aGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAg          <  1:147585/140‑1 (MQ=255)                                                                                                                             aGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAg          >  2:454361/1‑140 (MQ=255)                                                                                                                             aGTTGAACCTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAg          >  2:1291149/1‑140 (MQ=255)                                                                                                                                     cTGTTACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAGCTTCTTTg  >  1:413066/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                        GAGTGATCTCATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGTACCTTCATTTTTGTAATAACCCGTATTGTCAGTTGAACCTGTCACGATTGCCGTCACTGCACTTGTTTCAACCGGACAATCGGTTAATGACAAAGTAATATTGTGCCAGCCAGATGCAGAACCAGGTTGTTGCAGATTGCGCGTATAAAGATCCCCGAGATTAACGTTAGCTTCTTTG  >  NC_000913/1587897‑1588168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑