BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,972,868	T→C	E332G (GAG→GGG)	lplT ←	lysophospholipid transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,972,868	0	T	C	100.0%	341.7 / NA	93	E332G (GAG→GGG)	lplT	lysophospholipid transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (47/46); total (47/46)

AATGCCAATGGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTG  >  NC_000913/2972732‑2973003

aatgccaatgGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCt                                                                                                                                      >  1:1077418/1‑140 (MQ=255)

   gccaatgGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTa                                                                                                                                   >  1:274528/1‑140 (MQ=255)

   gccaatgGACACGGCCGGGATCCCTACCATAACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTa                                                                                                                                   <  2:195122/140‑1 (MQ=255)

       atgGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCaa                                                                                                                               >  1:602299/1‑140 (MQ=255)

       atgGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCaa                                                                                                                               >  1:69884/1‑140 (MQ=255)

           gCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCa                                                                                                                           <  2:602299/140‑1 (MQ=255)

            cACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCAt                                                                                                                          >  1:195122/1‑140 (MQ=255)

                aCCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAg                                                                                                                      <  2:95878/140‑1 (MQ=255)

                 ccGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGc                                                                                                                     >  2:716070/1‑140 (MQ=255)

                   gggATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCgg                                                                                                                   <  1:1164172/140‑1 (MQ=255)

                    ggATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGa                                                                                                                  >  1:940578/1‑140 (MQ=255)

                         ccTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGAc                                                                                                             >  2:756857/1‑140 (MQ=255)

                         ccTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGAc                                                                                                             >  1:1376965/1‑140 (MQ=255)

                           tATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACaa                                                                                                           >  2:70930/1‑140 (MQ=255)

                             tctttcccGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATCCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACaaaa                                                                                                         <  2:1358926/134‑1 (MQ=255)

                             tCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACaaaa                                                                                                         >  2:711216/1‑140 (MQ=255)

                             tCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACaaaa                                                                                                         <  2:1203597/140‑1 (MQ=255)

                                ttACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAg                                                                                                      <  1:1086710/140‑1 (MQ=255)

                                     gCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGccccc                                                                                                 >  1:1303693/1‑140 (MQ=255)

                                     cccAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGccccc                                                                                                 <  2:35211/139‑1 (MQ=255)

                                      ccAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGcccccc                                                                                                >  2:1264649/1‑140 (MQ=255)

                                      ccAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGcccccc                                                                                                >  2:355799/1‑140 (MQ=255)

                                       cAGCGATAAAGTGCCCAGCACAAACAACAGGGCGCTTTTTCCGCCAGGGTTTTGTCCGCCAAGCGCTTTCCCCCCCCCGCCGCTTTTTTTCCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCa                                                                                               <  2:940578/140‑1 (MQ=255)

                                        aGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCAt                                                                                              >  1:1396290/1‑140 (MQ=255)

                                        aGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCAt                                                                                              >  1:255482/1‑140 (MQ=255)

                                          cGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCa                                                                                            >  2:868850/1‑140 (MQ=255)

                                           gAGTAAATGCCCAGCATCAACAACATGCCGTTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCAc                                                                                           <  2:993116/140‑1 (MQ=255)

                                            aGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACg                                                                                          <  1:1078941/140‑1 (MQ=255)

                                              tAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGcc                                                                                        >  2:1204119/1‑140 (MQ=255)

                                                aaTGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCaa                                                                                      <  2:829673/140‑1 (MQ=255)

                                                 aTGCCCGGCACCACCAACATGGCGCTGTTTTCGCAAGGGTTTTGGACTGAAACCGCTTCCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAAt                                                                                     <  2:2428/140‑1 (MQ=255)

                                                  tGCCAAGCTTCAACAACATGCCGCTTTTTTCGCAAGGGTTTTGAACTCCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATc                                                                                    <  2:274528/140‑1 (MQ=255)

                                                   ccccAGCATCAACAACAGGGCGCTTTTTCCGCAAAGGTTTTGTACTGCAATCGCATCCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCa                                                                                   <  2:694421/139‑1 (MQ=255)

                                                     gacagaccaacaaCATGGCGCTGTTTTCGCCAAGGCTTTGTCCTGCAACCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGc                                                                                 <  2:977932/133‑1 (MQ=255)

                                                     ccaccaTCAACAACAGGGCGCTGTTTCCGCAAAGGTTTTGTCCTGCAATCCCATCCCCCGCCCCGACGCTTTTTTTCCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGc                                                                                 <  2:1389077/140‑1 (MQ=255)

                                                     ccAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGc                                                                                 <  1:231161/140‑1 (MQ=255)

                                                       ggCACCAACAAAGTGGCCCTGTTTTCGCAAAGGTTTTGTACTGCAAGCGCATCCCCCGCCCCGACGCTTTTTTTCCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCAt                                                                               <  2:69884/139‑1 (MQ=255)

                                                       aGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCAt                                                                               >  2:386540/1‑140 (MQ=255)

                                                         cATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCaa                                                                                      <  1:1249335/131‑1 (MQ=255)

                                                         cATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCGTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCaa                                                                                      >  2:1249335/1‑131 (MQ=255)

                                                          aTCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaa                                                                            <  1:491219/140‑1 (MQ=255)

                                                           tCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaac                                                                           <  1:582927/140‑1 (MQ=255)

                                                           tCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaac                                                                           <  1:1045522/140‑1 (MQ=255)

                                                           ccaacaaCATGGCGCTGTTTCCGCAAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaac                                                                           <  2:23001/139‑1 (MQ=255)

                                                                 acaGGGCGCTTTTTCCGCCAAGTTTTTGTACTGCAACCCCATCCCCCGCCCCGACGCTTTTTTTCCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCa                                                                     <  2:1077418/140‑1 (MQ=255)

                                                                   aTGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaa                                                                            >  1:739192/1‑131 (MQ=255)

                                                                   aTGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaa                                                                            <  2:739192/131‑1 (MQ=255)

                                                                   aTGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATa                                                                   >  2:572375/1‑140 (MQ=255)

                                                                    tGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCAt                                                                               <  2:1380115/127‑1 (MQ=255)

                                                                    tGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCAt                                                                               >  1:1380115/1‑127 (MQ=255)

                                                                     ggCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGcctgtc                                                                 >  1:977932/1‑135 (MQ=255)

                                                                      gcgcTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGc                                                                <  2:87699/140‑1 (MQ=255)

                                                                       cgcTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaac                                                                           >  2:624965/1‑128 (MQ=255)

                                                                       cgcTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATcaac                                                                           <  1:624965/128‑1 (MQ=255)

                                                                       cgcTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCt                                                               >  1:462905/1‑140 (MQ=255)

                                                                       cgcTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCt                                                               >  1:1342446/1‑140 (MQ=255)

                                                                            ttttCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGgcag                                                          >  2:761322/1‑140 (MQ=255)

                                                                            ttttCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGgcag                                                          <  1:1264649/140‑1 (MQ=255)

                                                                            ttttCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGgcag                                                          >  2:310388/1‑140 (MQ=255)

                                                                             tttCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGgcagc                                                         <  2:1376965/140‑1 (MQ=255)

                                                                             tttCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGgcagc                                                         >  2:811309/1‑140 (MQ=255)

                                                                                 gCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGCAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCt                                                     >  1:75516/1‑140 (MQ=255)

                                                                                   cAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCg                                                   >  1:1148170/1‑140 (MQ=255)

                                                                                     aGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCgtg                                                 <  1:1081879/140‑1 (MQ=255)

                                                                                          ttGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCa                                            <  1:922740/140‑1 (MQ=255)

                                                                                          ttGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCa                                            <  1:930575/140‑1 (MQ=255)

                                                                                             tACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAggg                                         <  2:237592/140‑1 (MQ=255)

                                                                                                tGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaa                                      <  1:70930/140‑1 (MQ=255)

                                                                                                tGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaa                                      <  1:1204119/140‑1 (MQ=255)

                                                                                                 gCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAgg                                          <  2:1211862/135‑1 (MQ=255)

                                                                                                 gCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAgg                                          >  1:1211862/1‑135 (MQ=255)

                                                                                                 gCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaa                                     >  1:664071/1‑140 (MQ=255)

                                                                                                 gCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaa                                     >  2:135957/1‑140 (MQ=255)

                                                                                                  cAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCagcagc                                                      >  1:156055/1‑122 (MQ=255)

                                                                                                  cAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCagcagc                                                      <  2:156055/122‑1 (MQ=255)

                                                                                                  cAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaaa                                    <  2:255482/140‑1 (MQ=255)

                                                                                                  cAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaaa                                    <  1:868850/140‑1 (MQ=255)

                                                                                                  cAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaaa                                    >  2:706053/1‑140 (MQ=255)

                                                                                                   aaTCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGaaaaaa                                   <  2:1342446/140‑1 (MQ=255)

                                                                                                    ataccATTCCCCGCCCGGACGGTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGGACCCCAGCACGCCAATCAGTATCAACAAAGAATAGGCCGGCAGAAGCTCGGGTTGCAGGGAAAAAAt                                  <  2:75516/136‑1 (MQ=255)

                                                                                                    aTCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCTCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAAt                                  >  2:764731/1‑140 (MQ=255)

                                                                                                     tCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATc                                 <  1:756857/140‑1 (MQ=255)

                                                                                                       gCATTCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAg                               >  1:944897/1‑140 (MQ=255)

                                                                                                          ttCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTac                            >  1:535361/1‑140 (MQ=255)

                                                                                                          ttCCCCGCCCCGACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTac                            >  2:972819/1‑140 (MQ=255)

                                                                                                               cgccccgACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTAccacca                       >  1:821562/1‑140 (MQ=255)

                                                                                                               cgccccgACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTAccacca                       >  1:1343308/1‑140 (MQ=255)

                                                                                                               cgccccgACGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCACCTCGTGTTGCAGGGAAAAAATCAGAAccacca                       >  1:642247/1‑140 (MQ=255)

                                                                                                                      aCGCTTTTTTTACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAAt                >  2:327943/1‑140 (MQ=255)

                                                                                                                            tttttACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAAt          >  1:1337006/1‑140 (MQ=255)

                                                                                                                            tttttACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAAt          >  2:848825/1‑140 (MQ=255)

                                                                                                                            tttttACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAAt          >  2:848826/1‑140 (MQ=255)

                                                                                                                             ttttCCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATc         <  1:1076020/140‑1 (MQ=255)

                                                                                                                             ttttACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATc         <  1:1311837/140‑1 (MQ=255)

                                                                                                                               ttACCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATccc       <  1:761322/140‑1 (MQ=255)

                                                                                                                                 cccccGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCgg     <  1:1101767/139‑1 (MQ=255)

                                                                                                                                 cccccGCCCCTGGAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCTCGCCAACCAGCATCAACAAGGCATAGGATGCCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCgg     <  2:1303693/139‑1 (MQ=255)

                                                                                                                                 aCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCgg     <  1:386540/140‑1 (MQ=255)

                                                                                                                                 aCCCCGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCgg     <  1:355799/140‑1 (MQ=255)

                                                                                                                                    ccGCCCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTg  <  2:1343308/140‑1 (MQ=255)

AATGCCAATGGGCACGACCGGGATGCCTATCATTACCGCCAGCGAGTAAATGCCCAGCATCAACAACATGGCGCTGTTTTCGCCAAGGTTTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTCCTGTAGCAACGCATTGAGCGGAACGACAAAAAAGCCCCCCATCACGCCAATCAGCATCAACAAGGCATAGGCTGGCAGCAGCTCGTGTTGCAGGGAAAAAATCAGTACCACCACGCCAATCAAAATCCCGGCTG  >  NC_000913/2972732‑2973003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`