Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 438,348 A→G G610G (GGT→GGC dxs ← 1‑deoxy‑D‑xylulose‑5‑phosphate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913438,3480AG100.0% 283.2 / NA 76G610G (GGT→GGCdxs1‑deoxy‑D‑xylulose‑5‑phosphate synthase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (45/31);  total (45/31)

AAGCTCCTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATACCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCACGCCGCTGCCT  >  NC_000913/438218‑438483
                                                                                                                                  |                                                                                                                                       
aaGCTCCTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCa                                                                                                                                >  1:199607/1‑140 (MQ=255)
    tCCTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGa                                                                                                                            >  2:349522/1‑140 (MQ=255)
    tCCTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGa                                                                                                                            >  1:416855/1‑140 (MQ=255)
      cTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAgg                                                                                                                          >  1:91839/1‑140 (MQ=255)
       tGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGc                                                                                                                         >  2:99381/1‑140 (MQ=255)
       tGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGc                                                                                                                         >  1:1053241/1‑140 (MQ=255)
       tGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGc                                                                                                                         >  2:570662/1‑140 (MQ=255)
               cACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCa                                                                                                                                <  1:886080/125‑1 (MQ=255)
               cACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCa                                                                                                                                >  2:886080/1‑125 (MQ=255)
                aCTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCgg                                                                                                                >  2:295697/1‑140 (MQ=255)
                    gTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGgcgcg                                                                                                            >  2:1417133/1‑140 (MQ=255)
                     tttGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGgcgcgc                                                                                                           <  2:1053241/140‑1 (MQ=255)
                       tGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGgcgcg                                                                                                            >  1:1286586/1‑137 (MQ=255)
                       tGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGgcgcg                                                                                                            <  2:1286586/137‑1 (MQ=255)
                        gccgccTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCAtt                                                                                                        <  2:645808/140‑1 (MQ=255)
                        gccgccTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCAtt                                                                                                        <  1:295697/140‑1 (MQ=255)
                         ccgccTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTAAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCAttt                                                                                                       >  2:1395928/1‑140 (MQ=255)
                           gccTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATttct                                                                                                     <  1:349522/140‑1 (MQ=255)
                                ccTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTg                                                                                                >  1:356782/1‑140 (MQ=255)
                                  tGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAg                                                                                              >  2:333036/1‑140 (MQ=255)
                                       cTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCt                                                                                         >  1:1224778/1‑140 (MQ=255)
                                       cTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCt                                                                                         >  2:14390/1‑140 (MQ=255)
                                       cTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCt                                                                                         >  1:1260987/1‑140 (MQ=255)
                                         cGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTg                                                                                       >  2:1065412/1‑140 (MQ=255)
                                         cGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTg                                                                                       <  2:416855/140‑1 (MQ=255)
                                           aaTTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCg                                                                                     <  1:1964/140‑1 (MQ=255)
                                              tattTAGAGTCTATGAATAATTTCTAAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGaa                                                                                  <  1:1395928/140‑1 (MQ=255)
                                                         tATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTcc                                                                       >  1:1246705/1‑140 (MQ=255)
                                                         tATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTcc                                                                       >  2:745742/1‑140 (MQ=255)
                                                          aTGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCtt                                                                                        >  1:287406/1‑122 (MQ=255)
                                                          aTGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCtt                                                                                        <  2:287406/122‑1 (MQ=255)
                                                          aTGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCg                                                                                     <  1:273848/125‑1 (MQ=255)
                                                          aTGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCg                                                                                     >  2:273848/1‑125 (MQ=255)
                                                          aTGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCg                                                                      >  2:891611/1‑140 (MQ=255)
                                                           tGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCgg                                                                     <  1:1417133/140‑1 (MQ=255)
                                                                aatTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGc                                                                <  1:1017751/140‑1 (MQ=255)
                                                                aatTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGc                                                                <  1:570662/140‑1 (MQ=255)
                                                                  tttCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCa                                                              <  1:891611/140‑1 (MQ=255)
                                                                     cTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATg                                                           >  1:726654/1‑140 (MQ=255)
                                                                         aGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCa                                                       >  1:126505/1‑140 (MQ=255)
                                                                              aGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACg                                                  >  1:1400414/1‑140 (MQ=255)
                                                                                cAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCAc                                                   <  1:1187744/137‑1 (MQ=255)
                                                                                cAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCAc                                                   >  2:1187744/1‑137 (MQ=255)
                                                                                cAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACggg                                                >  1:1122329/1‑140 (MQ=255)
                                                                                cAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACggg                                                >  2:192284/1‑140 (MQ=255)
                                                                                  ggagtggagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTa                                              <  2:1246705/140‑1 (MQ=255)
                                                                                  ggagtggagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTa                                              <  2:199607/140‑1 (MQ=255)
                                                                                   gagtggagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTAc                                             <  2:726654/140‑1 (MQ=255)
                                                                                     gtggagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTg                                           >  2:470587/1‑140 (MQ=255)
                                                                                      tggagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTgg                                          >  1:888082/1‑140 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        <  2:1260987/140‑1 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  2:1232648/1‑140 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  2:1328548/1‑140 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  1:568664/1‑140 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  1:848601/1‑140 (MQ=255)
                                                                                        gagtAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  2:170636/1‑140 (MQ=255)
                                                                                             gggATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGa                                   >  1:1014528/1‑140 (MQ=255)
                                                                                              ggATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        >  1:953985/1‑134 (MQ=255)
                                                                                              ggATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGtt                                        <  2:953985/134‑1 (MQ=255)
                                                                                              ggATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGAt                                  <  1:745742/140‑1 (MQ=255)
                                                                                              ggATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGAt                                  >  1:284574/1‑140 (MQ=255)
                                                                                                aTTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATgg                                >  2:125717/1‑140 (MQ=255)
                                                                                                aTTATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATgg                                <  1:1065412/140‑1 (MQ=255)
                                                                                                  tATGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGc                              <  1:1328548/140‑1 (MQ=255)
                                                                                                   aTGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGcc                             >  1:555596/1‑140 (MQ=255)
                                                                                                   aTGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGcc                             >  2:1079764/1‑140 (MQ=255)
                                                                                                    tGCCAGCCAGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCa                            <  1:482017/140‑1 (MQ=255)
                                                                                                     gccagccaGGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCAt                           <  2:555596/140‑1 (MQ=255)
                                                                                                         gccagGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGc                       >  2:1086218/1‑140 (MQ=255)
                                                                                                           cagGCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCAc                     <  1:333036/140‑1 (MQ=255)
                                                                                                              gCCTTGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTc                  >  1:454663/1‑140 (MQ=255)
                                                                                                                  tGATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTc              <  1:1079764/140‑1 (MQ=255)
                                                                                                                   gATTTTGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCa             <  1:170636/140‑1 (MQ=255)
                                                                                                                        tGGCTTCCATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCAcgccg        <  1:192284/140‑1 (MQ=255)
                                                                                                                              ccATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCACGCCGctgcct  >  1:1013863/1‑140 (MQ=255)
                                                                                                                              ccATGCCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCACGCCGctgcct  <  2:1014528/140‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                       
AAGCTCCTGGGGCTTCACTCGTTTGCCGCCTTCCTGCAACTCGAATTATTTAGAGTCTATGAATAATTTCTTAAGCATAGCAGGAGTGGAGTAGGGATTATGCCAGCCAGGCCTTGATTTTGGCTTCCATACCAGCGGCATCGAGGCCGAGTTCGGCGCGCATTTCTTCCTGAGTTCCTTGCGGAATAAAGAAGTCCGGCAGGCCAATGTTCAGCACGGGTACTGGTTTACGATGGGCCATCAGCACTTCGTTCACGCCGCTGCCT  >  NC_000913/438218‑438483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: